FFCP PHASE1:Mm9::chr2:134469861..134469879,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=52837 | |EntrezGene=52837 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000137377_5end | |association_with_transcript=0bp_to_ENSMUST00000137377_5end | ||
|cluster_id=chr2:134469861..134469879,- | |||
|description=CAGE_peak_1_at_Tmx4_5end | |description=CAGE_peak_1_at_Tmx4_5end | ||
|id=chr2:134469861..134469879,- | |id=chr2:134469861..134469879,- | ||
|ontology_enrichment_celltype=CL:0000540!2.06e-16!33;CL:0000047!2.06e-16!33;CL:0000031!2.06e-16!33;CL:0000404!2.06e-16!33;CL:0000117!4.61e-13!23;CL:0000337!4.61e-13!23;CL:0000393!4.85e-12!39;CL:0000211!4.85e-12!39;CL:0002319!6.42e-11!43;CL:0000221!7.90e-11!44;CL:0000133!7.90e-11!44;CL:0000055!4.58e-08!50 | |ontology_enrichment_celltype=CL:0000540!2.06e-16!33;CL:0000047!2.06e-16!33;CL:0000031!2.06e-16!33;CL:0000404!2.06e-16!33;CL:0000117!4.61e-13!23;CL:0000337!4.61e-13!23;CL:0000393!4.85e-12!39;CL:0000211!4.85e-12!39;CL:0002319!6.42e-11!43;CL:0000221!7.90e-11!44;CL:0000133!7.90e-11!44;CL:0000055!4.58e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.06e-16,33;CL:0000047,2.06e-16,33;CL:0000031,2.06e-16,33;CL:0000404,2.06e-16,33;CL:0000117,4.61e-13,23;CL:0000337,4.61e-13,23;CL:0000393,4.84e-12,39;CL:0000211,4.84e-12,39;CL:0002319,6.42e-11,43;CL:0000221,7.90e-11,44;CL:0000133,7.90e-11,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.87e-27!73;UBERON:0005743!2.87e-27!73;UBERON:0000073!4.73e-26!75;UBERON:0001016!4.73e-26!75;UBERON:0002346!4.04e-23!71;UBERON:0003075!4.04e-23!71;UBERON:0007284!4.04e-23!71;UBERON:0001049!2.33e-21!52;UBERON:0005068!2.33e-21!52;UBERON:0006241!2.33e-21!52;UBERON:0007135!2.33e-21!52;UBERON:0000033!1.20e-20!63;UBERON:0000955!1.22e-20!50;UBERON:0006238!1.22e-20!50;UBERON:0004121!1.74e-20!102;UBERON:0000924!1.74e-20!102;UBERON:0006601!1.74e-20!102;UBERON:0002616!3.87e-20!49;UBERON:0003056!7.99e-19!49;UBERON:0003080!2.49e-17!40;UBERON:0002780!1.10e-16!39;UBERON:0001890!1.10e-16!39;UBERON:0006240!1.10e-16!39;UBERON:0002020!6.82e-16!34;UBERON:0000025!1.07e-13!114;UBERON:0002791!2.47e-13!29;UBERON:0003528!2.47e-13!29;UBERON:0001893!2.47e-13!29;UBERON:0004111!7.33e-12!122;UBERON:0000956!9.66e-09!21;UBERON:0001869!9.66e-09!21;UBERON:0000203!9.66e-09!21;UBERON:0007811!1.39e-07!86;UBERON:0002619!2.42e-07!17;UBERON:0000153!9.59e-07!94 | |ontology_enrichment_uberon=UBERON:0001017!2.87e-27!73;UBERON:0005743!2.87e-27!73;UBERON:0000073!4.73e-26!75;UBERON:0001016!4.73e-26!75;UBERON:0002346!4.04e-23!71;UBERON:0003075!4.04e-23!71;UBERON:0007284!4.04e-23!71;UBERON:0001049!2.33e-21!52;UBERON:0005068!2.33e-21!52;UBERON:0006241!2.33e-21!52;UBERON:0007135!2.33e-21!52;UBERON:0000033!1.20e-20!63;UBERON:0000955!1.22e-20!50;UBERON:0006238!1.22e-20!50;UBERON:0004121!1.74e-20!102;UBERON:0000924!1.74e-20!102;UBERON:0006601!1.74e-20!102;UBERON:0002616!3.87e-20!49;UBERON:0003056!7.99e-19!49;UBERON:0003080!2.49e-17!40;UBERON:0002780!1.10e-16!39;UBERON:0001890!1.10e-16!39;UBERON:0006240!1.10e-16!39;UBERON:0002020!6.82e-16!34;UBERON:0000025!1.07e-13!114;UBERON:0002791!2.47e-13!29;UBERON:0003528!2.47e-13!29;UBERON:0001893!2.47e-13!29;UBERON:0004111!7.33e-12!122;UBERON:0000956!9.66e-09!21;UBERON:0001869!9.66e-09!21;UBERON:0000203!9.66e-09!21;UBERON:0007811!1.39e-07!86;UBERON:0002619!2.42e-07!17;UBERON:0000153!9.59e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.87e-27,73;UBERON:0001016,4.73e-26,75;UBERON:0002346,3.79e-24,64;UBERON:0003075,3.79e-24,64;UBERON:0007284,3.79e-24,64;UBERON:0010314,4.78e-23,92;UBERON:0000073,6.55e-23,54;UBERON:0001049,2.33e-21,52;UBERON:0005068,2.33e-21,52;UBERON:0006241,2.33e-21,52;UBERON:0007135,2.33e-21,52;UBERON:0004121,9.35e-21,95;UBERON:0000924,9.35e-21,95;UBERON:0006601,9.35e-21,95;UBERON:0003056,7.99e-19,49;UBERON:0010371,1.25e-18,73;UBERON:0000955,1.46e-18,47;UBERON:0006238,1.46e-18,47;UBERON:0002616,4.49e-18,46;UBERON:0003080,2.49e-17,40;UBERON:0002780,1.10e-16,39;UBERON:0001890,1.10e-16,39;UBERON:0006240,1.10e-16,39;UBERON:0002020,6.81e-16,34;UBERON:0000025,1.07e-13,114;UBERON:0003528,2.47e-13,29;UBERON:0002791,2.47e-13,29;UBERON:0001893,2.47e-13,29;UBERON:0004111,7.32e-12,122;UBERON:0000956,9.66e-09,21;UBERON:0001869,9.66e-09,21;UBERON:0000203,9.66e-09,21;UBERON:0002619,2.42e-07,17 | |||
|phase1_expression=19.3780104996801,1.04692622291808,0.454999239389536,0.30246421130683,1.00179145989269,2.01455126294268,2.33612640595526,7.23090611272827,8.58811205125167,11.0010327371337,1.02730780935303,1.99430397488341,6.16322627752341,6.8187913886818,7.66152452176024,6.88415909125408,16.0899231969474,4.41647031501533,6.44437837946972,6.36584477697045,27.1288095581913,8.73760370567791,7.57479388502913,1.91990907352088,1.83527424853736,0,0.430761996159075,1.72376986148711,0.570070258369122,1.00812051903972,1.33038306393183,8.89042942843484,4.92051830067656,0,5.48818077527422,3.32469290716985,7.14592746918292,77.4283516863279,64.8508335954754,93.1872264273361,174.11652045718,103.822913713684,118.950036492633,7.80560271448579,7.50189291024408,9.54443111240744,4.69434806608824,13.5175596955877,8.5677611266444,17.8875507148341,9.23910382727393,5.75010257459886,8.38913030288682,5.07753499407941,7.73015738027667,5.91696702882678,6.01720223871389,9.7977697532714,62.3134699447561,67.7108453468202,62.1154775436056,8.80995783379743,3.55717918444456,4.94944844504769,5.93319817540185,4.2628806896766,6.89080254192331,9.22123932771731,30.4847460186924,25.7861342213529,28.8145197051393,46.2754594734162,40.6398115350969,35.2773501739068,26.8367318851062,32.1726575313507,107.913563379401,75.9739661606867,89.2453958218775,70.6910502233839,61.6626717880241,66.1559980607085,77.6128737223839,106.924895906019,88.4701854627731,54.8009168981022,61.3621944244134,64.3078088097287,6.05809546665472,11.5624486963382,20.0006497204158,11.185510400758,4.75979933595425,6.47643829965381,11.0461990966104,13.4408066129201,11.3759980306719,5.96506129023202,4.41636207824877,1.41335829804136,13.5209682985613,3.84979432242953,0,7.11066703153331,3.89683873820185,4.30711771307668,5.56076889516262,8.90634261808668,8.2860122767095,18.5552673831031,13.8788261412909,12.7875500891099,11.3001593655469,13.8664829308413,11.8764594207062,12.4409925416379,6.67426412882809,12.8693427658721,34.4998115260451,8.08834249737046,9.71702681225732,11.6370060752453,3.72783522436244,34.8409148443741,31.6264527288317,3.32094171771169,21.2072770375479,25.7958174327165,41.170753571673,75.0451103418162,51.6975681185048,48.3769255634528,51.7996474172984,55.4902542406817,51.5314350507709,56.7844420737152,18.7384429484582,13.9335807083304,10.3616330957807,11.7847439296425,12.3614420814569,26.4387420098494,22.5077662256687,24.866294942893,26.2620886724126,28.4412459032367,25.9553777030449,21.2136764005993,10.993967639575,13.4265316919152,12.3165786914764,10.0830036916684,12.7901734643775,11.8405736617537,6.1734640922383,16.1217756122979,94.7987802872867,60.7341060790728,105.140494776369,15.5344329401626,13.1334593589414,16.7457717158744,18.2293446400612,19.6764231747404,20.0547246753592,19.3003174142839,17.1694976895756,16.9309746432396,22.7092592880603,18.7150909050169,15.0787985755292,16.9591985413385,16.9053588774109,16.6415959262861,43.3197294042102,42.705414137403,1.32167513193519,2.90895623329899,13.4371597837197,18.1144604051142,9.27845721519072,7.66397393568702,9.56225588532942,6.27744566171445,3.79623249235609,8.23494773620054,6.03204501120647,7.16243299348143,6.04388670069272,3.59527763461689,2.16138049874694,3.18626037206988,8.91439134479484,12.6815848996799,14.6520056375005,11.6081256871829,10.0855293327165,9.88915060453492,12.5208343506029,10.1851002105925,12.2459007716272,8.39100714668244,6.22550516883013,5.6727335943472,7.07612382407531,7.19558759631532,8.11440485554012,10.1294407096015,14.0044218479781,10.0693648107784,20.5911738004295,15.1008777253445,25.8782771749238,14.1413560114031,11.8574315783533,8.08252409430758,7.17589654087649,8.20153986317724,10.7156850296631,15.5382957651798,12.711268162478,9.50572480341054,8.68353918667458,11.2229192486017,10.7119638398706,11.9031525193257,13.0837169608139,15.723992965063,18.018388858296,10.9788420859544,14.6782234586011,13.4523624480806,9.04747703635634,7.07077388964322,5.4094070032094,3.31124095565679,73.8532713943843,66.8106613575558,8.85248705034047,10.0988370881749,22.4010835785542,23.8167634020949,40.715022171499,32.2607877235945,42.1089494015725,53.5014643190893,31.9800454323167,29.8100975069538,32.0183100136684,46.9129121975838,14.0520684356186,13.7110514823787,16.7773568134183,16.4970122972535,3.98235415019888,8.98288353773431,5.74414758233027,5.09233715340925,4.42952839321159,7.99331384654211,6.20227903603731,7.99774204850512,9.62542921638748,7.26884543252377,7.37930260024991,5.15677716240934,56.8534141608826,24.6683698822895,16.0404767890616,24.6487590286331,27.3103959809101,27.1120602755147,35.8716864912624,19.4857567433344,5.16277757740163,13.9809166770121,6.83638033970382,6.26567761177624,6.45857706783622,5.54878909339034,7.5204576721976,7.71462228801788,4.95517422270746,56.3692918111949,9.3978984438819,7.84270098260245,8.70414278637645,13.7508973613424,9.43190171275074,8.92234875505438,18.1876920093425,14.6949024939841,25.0141952586007,3.81868247206045,15.0259596951039,16.4688768372747,10.58452340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|phase1_expression=19.3780104996801,1.04692622291808,0.454999239389536,0.30246421130683,1.00179145989269,2.01455126294268,2.33612640595526,7.23090611272827,8.58811205125167,11.0010327371337,1.02730780935303,1.99430397488341,6.16322627752341,6.8187913886818,7.66152452176024,6.88415909125408,16.0899231969474,4.41647031501533,6.44437837946972,6.36584477697045,27.1288095581913,8.73760370567791,7.57479388502913,1.91990907352088,1.83527424853736,0,0.430761996159075,1.72376986148711,0.570070258369122,1.00812051903972,1.33038306393183,8.89042942843484,4.92051830067656,0,5.48818077527422,3.32469290716985,7.14592746918292,77.4283516863279,64.8508335954754,93.1872264273361,174.11652045718,103.822913713684,118.950036492633,7.80560271448579,7.50189291024408,9.54443111240744,4.69434806608824,13.5175596955877,8.5677611266444,17.8875507148341,9.23910382727393,5.75010257459886,8.38913030288682,5.07753499407941,7.73015738027667,5.91696702882678,6.01720223871389,9.7977697532714,62.3134699447561,67.7108453468202,62.1154775436056,8.80995783379743,3.55717918444456,4.94944844504769,5.93319817540185,4.2628806896766,6.89080254192331,9.22123932771731,30.4847460186924,25.7861342213529,28.8145197051393,46.2754594734162,40.6398115350969,35.2773501739068,26.8367318851062,32.1726575313507,107.913563379401,75.9739661606867,89.2453958218775,70.6910502233839,61.6626717880241,66.1559980607085,77.6128737223839,106.924895906019,88.4701854627731,54.8009168981022,61.3621944244134,64.3078088097287,6.05809546665472,11.5624486963382,20.0006497204158,11.185510400758,4.75979933595425,6.47643829965381,11.0461990966104,13.4408066129201,11.3759980306719,5.96506129023202,4.41636207824877,1.41335829804136,13.5209682985613,3.84979432242953,0,7.11066703153331,3.89683873820185,4.30711771307668,5.56076889516262,8.90634261808668,8.2860122767095,18.5552673831031,13.8788261412909,12.7875500891099,11.3001593655469,13.8664829308413,11.8764594207062,12.4409925416379,6.67426412882809,12.8693427658721,34.4998115260451,8.08834249737046,9.71702681225732,11.6370060752453,3.72783522436244,34.8409148443741,31.6264527288317,3.32094171771169,21.2072770375479,25.7958174327165,41.170753571673,75.0451103418162,51.6975681185048,48.3769255634528,51.7996474172984,55.4902542406817,51.5314350507709,56.7844420737152,18.7384429484582,13.9335807083304,10.3616330957807,11.7847439296425,12.3614420814569,26.4387420098494,22.5077662256687,24.866294942893,26.2620886724126,28.4412459032367,25.9553777030449,21.2136764005993,10.993967639575,13.4265316919152,12.3165786914764,10.0830036916684,12.7901734643775,11.8405736617537,6.1734640922383,16.1217756122979,94.7987802872867,60.7341060790728,105.140494776369,15.5344329401626,13.1334593589414,16.7457717158744,18.2293446400612,19.6764231747404,20.0547246753592,19.3003174142839,17.1694976895756,16.9309746432396,22.7092592880603,18.7150909050169,15.0787985755292,16.9591985413385,16.9053588774109,16.6415959262861,43.3197294042102,42.705414137403,1.32167513193519,2.90895623329899,13.4371597837197,18.1144604051142,9.27845721519072,7.66397393568702,9.56225588532942,6.27744566171445,3.79623249235609,8.23494773620054,6.03204501120647,7.16243299348143,6.04388670069272,3.59527763461689,2.16138049874694,3.18626037206988,8.91439134479484,12.6815848996799,14.6520056375005,11.6081256871829,10.0855293327165,9.88915060453492,12.5208343506029,10.1851002105925,12.2459007716272,8.39100714668244,6.22550516883013,5.6727335943472,7.07612382407531,7.19558759631532,8.11440485554012,10.1294407096015,14.0044218479781,10.0693648107784,20.5911738004295,15.1008777253445,25.8782771749238,14.1413560114031,11.8574315783533,8.08252409430758,7.17589654087649,8.20153986317724,10.7156850296631,15.5382957651798,12.711268162478,9.50572480341054,8.68353918667458,11.2229192486017,10.7119638398706,11.9031525193257,13.0837169608139,15.723992965063,18.018388858296,10.9788420859544,14.6782234586011,13.4523624480806,9.04747703635634,7.07077388964322,5.4094070032094,3.31124095565679,73.8532713943843,66.8106613575558,8.85248705034047,10.0988370881749,22.4010835785542,23.8167634020949,40.715022171499,32.2607877235945,42.1089494015725,53.5014643190893,31.9800454323167,29.8100975069538,32.0183100136684,46.9129121975838,14.0520684356186,13.7110514823787,16.7773568134183,16.4970122972535,3.98235415019888,8.98288353773431,5.74414758233027,5.09233715340925,4.42952839321159,7.99331384654211,6.20227903603731,7.99774204850512,9.62542921638748,7.26884543252377,7.37930260024991,5.15677716240934,56.8534141608826,24.6683698822895,16.0404767890616,24.6487590286331,27.3103959809101,27.1120602755147,35.8716864912624,19.4857567433344,5.16277757740163,13.9809166770121,6.83638033970382,6.26567761177624,6.45857706783622,5.54878909339034,7.5204576721976,7.71462228801788,4.95517422270746,56.3692918111949,9.3978984438819,7.84270098260245,8.70414278637645,13.7508973613424,9.43190171275074,8.92234875505438,18.1876920093425,14.6949024939841,25.0141952586007,3.81868247206045,15.0259596951039,16.4688768372747,10.58452340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| ||
|short_description=p1@Tmx4 | |short_description=p1@Tmx4 | ||
}} | }} |
Latest revision as of 19:10, 25 September 2015
Short description: | p1@Tmx4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmx4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000137377_5end |
EntrezGene: | Tmx4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.06e-16 | 33 |
neuronal stem cell | 2.06e-16 | 33 |
neuroblast | 2.06e-16 | 33 |
electrically signaling cell | 2.06e-16 | 33 |
CNS neuron (sensu Vertebrata) | 4.61e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.61e-13 | 23 |
electrically responsive cell | 4.84e-12 | 39 |
electrically active cell | 4.84e-12 | 39 |
neural cell | 6.42e-11 | 43 |
ectodermal cell | 7.90e-11 | 44 |
neurectodermal cell | 7.90e-11 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.87e-27 | 73 |
nervous system | 4.73e-26 | 75 |
neurectoderm | 3.79e-24 | 64 |
neural plate | 3.79e-24 | 64 |
presumptive neural plate | 3.79e-24 | 64 |
structure with developmental contribution from neural crest | 4.78e-23 | 92 |
regional part of nervous system | 6.55e-23 | 54 |
neural tube | 2.33e-21 | 52 |
neural rod | 2.33e-21 | 52 |
future spinal cord | 2.33e-21 | 52 |
neural keel | 2.33e-21 | 52 |
ectoderm-derived structure | 9.35e-21 | 95 |
ectoderm | 9.35e-21 | 95 |
presumptive ectoderm | 9.35e-21 | 95 |
pre-chordal neural plate | 7.99e-19 | 49 |
ecto-epithelium | 1.25e-18 | 73 |
brain | 1.46e-18 | 47 |
future brain | 1.46e-18 | 47 |
regional part of brain | 4.49e-18 | 46 |
anterior neural tube | 2.49e-17 | 40 |
regional part of forebrain | 1.10e-16 | 39 |
forebrain | 1.10e-16 | 39 |
future forebrain | 1.10e-16 | 39 |
gray matter | 6.81e-16 | 34 |
tube | 1.07e-13 | 114 |
brain grey matter | 2.47e-13 | 29 |
regional part of telencephalon | 2.47e-13 | 29 |
telencephalon | 2.47e-13 | 29 |
anatomical conduit | 7.32e-12 | 122 |
cerebral cortex | 9.66e-09 | 21 |
cerebral hemisphere | 9.66e-09 | 21 |
pallium | 9.66e-09 | 21 |
regional part of cerebral cortex | 2.42e-07 | 17 |