FFCP PHASE1:Mm9::chr9:44581071..44581098,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76568 | |EntrezGene=76568 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=335 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DB07 | |UniProt=Q9DB07 | ||
|association_with_transcript=0bp_to_NM_023831,uc009pek.1_5end | |association_with_transcript=0bp_to_NM_023831,uc009pek.1_5end | ||
|cluster_id=chr9:44581071..44581098,+ | |||
|description=CAGE_peak_2_at_Ift46_5end | |description=CAGE_peak_2_at_Ift46_5end | ||
|id=chr9:44581071..44581098,+ | |id=chr9:44581071..44581098,+ | ||
|ontology_enrichment_celltype=CL:0000221!4.30e-18!44;CL:0000133!4.30e-18!44;CL:0000055!6.63e-18!50;CL:0002319!1.26e-17!43;CL:0000393!2.36e-16!39;CL:0000211!2.36e-16!39;CL:0000540!1.83e-15!33;CL:0000047!1.83e-15!33;CL:0000031!1.83e-15!33;CL:0000404!1.83e-15!33;CL:0000117!1.90e-13!23;CL:0000337!1.90e-13!23;CL:0002321!1.05e-10!70;CL:0000220!1.05e-10!70 | |ontology_enrichment_celltype=CL:0000221!4.30e-18!44;CL:0000133!4.30e-18!44;CL:0000055!6.63e-18!50;CL:0002319!1.26e-17!43;CL:0000393!2.36e-16!39;CL:0000211!2.36e-16!39;CL:0000540!1.83e-15!33;CL:0000047!1.83e-15!33;CL:0000031!1.83e-15!33;CL:0000404!1.83e-15!33;CL:0000117!1.90e-13!23;CL:0000337!1.90e-13!23;CL:0002321!1.05e-10!70;CL:0000220!1.05e-10!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.28e-18,44;CL:0000133,4.28e-18,44;CL:0002319,1.26e-17,43;CL:0000393,2.35e-16,39;CL:0000211,2.35e-16,39;CL:0000540,1.82e-15,33;CL:0000047,1.82e-15,33;CL:0000031,1.82e-15,33;CL:0000404,1.82e-15,33;CL:0000117,1.90e-13,23;CL:0000337,1.90e-13,23;CL:0002321,1.00e-10,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.88e-28!75;UBERON:0001016!1.88e-28!75;UBERON:0001017!3.18e-28!73;UBERON:0005743!3.18e-28!73;UBERON:0004121!1.71e-23!102;UBERON:0000924!1.71e-23!102;UBERON:0006601!1.71e-23!102;UBERON:0000033!2.83e-21!63;UBERON:0000955!1.81e-20!50;UBERON:0006238!1.81e-20!50;UBERON:0001049!1.94e-20!52;UBERON:0005068!1.94e-20!52;UBERON:0006241!1.94e-20!52;UBERON:0007135!1.94e-20!52;UBERON:0002616!2.31e-20!49;UBERON:0002346!3.61e-18!71;UBERON:0003075!3.61e-18!71;UBERON:0007284!3.61e-18!71;UBERON:0003056!1.27e-17!49;UBERON:0003080!1.09e-16!40;UBERON:0002020!1.11e-16!34;UBERON:0002780!1.75e-16!39;UBERON:0001890!1.75e-16!39;UBERON:0006240!1.75e-16!39;UBERON:0002791!1.49e-14!29;UBERON:0003528!1.49e-14!29;UBERON:0001893!1.49e-14!29;UBERON:0000153!3.24e-11!94;UBERON:0000956!3.29e-11!21;UBERON:0001869!3.29e-11!21;UBERON:0000203!3.29e-11!21;UBERON:0007811!1.43e-09!86;UBERON:0002619!5.66e-09!17;UBERON:0000025!3.84e-08!114;UBERON:0004111!5.55e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.87e-28,75;UBERON:0001017,3.16e-28,73;UBERON:0004121,1.01e-26,95;UBERON:0000924,1.01e-26,95;UBERON:0006601,1.01e-26,95;UBERON:0000073,1.06e-22,54;UBERON:0002346,7.91e-22,64;UBERON:0003075,7.91e-22,64;UBERON:0007284,7.91e-22,64;UBERON:0010371,1.91e-20,73;UBERON:0001049,1.93e-20,52;UBERON:0005068,1.93e-20,52;UBERON:0006241,1.93e-20,52;UBERON:0007135,1.93e-20,52;UBERON:0010314,2.24e-20,92;UBERON:0000955,7.51e-19,47;UBERON:0006238,7.51e-19,47;UBERON:0002616,9.53e-19,46;UBERON:0003056,1.27e-17,49;UBERON:0003080,1.08e-16,40;UBERON:0002020,1.11e-16,34;UBERON:0002780,1.74e-16,39;UBERON:0001890,1.74e-16,39;UBERON:0006240,1.74e-16,39;UBERON:0003528,1.48e-14,29;UBERON:0002791,1.48e-14,29;UBERON:0001893,1.48e-14,29;UBERON:0000956,3.28e-11,21;UBERON:0001869,3.28e-11,21;UBERON:0000203,3.28e-11,21;UBERON:0002619,5.65e-09,17;UBERON:0000025,3.70e-08,114;UBERON:0004111,5.36e-08,122 | |||
|phase1_expression=7.68714466103011,2.09385244583617,2.27499619694768,0.60492842261366,3.50627010962443,1.34303417529512,5.37309073369709,1.42035655785734,0.281577444303333,0.234064526321993,0,0.0797721589953364,1.88320802924326,1.74840804837995,0.666219523631325,1.41732687172878,0,3.62781490161973,4.11343300817216,1.27316895539409,6.88850650223665,3.97163804803541,3.6567970479451,6.23970448894286,6.19405058881359,4.01962374880514,4.30761996159075,5.38678081714723,9.88121781173144,4.53654233567875,3.32595765982957,0.635030673459631,0.61506478758457,0,3.17736781726402,3.82339684324532,3.87921776898501,1.25559489221072,3.906676722619,2.61761871986899,1.17646297606203,0.683045484958446,0.485510353031154,6.6725313527056,6.69087746048796,2.75320128242522,7.82391344348039,8.50298109883741,7.24964403023757,5.63846707315422,7.41928034614421,4.31257693094915,1.67782606057736,1.45072428402269,2.35265659399725,9.26133969729409,13.4670716771216,5.15672092277442,12.7459370341547,22.2176211294254,15.2119536841483,7.45457970552091,9.78224275722253,6.29929802096979,3.9554654502679,3.5524005747305,6.5912024314049,6.53171119046643,15.9682002955056,17.010748229793,17.2466468308133,7.7125765789027,7.06779331045163,16.7812394924487,19.073248732629,18.3843757322004,12.1127469099328,7.53355294702608,8.60196586234964,17.1452174049252,17.0167017100482,19.2737947106001,8.37548997004143,6.75315132038016,6.1119299110724,8.54422897873636,8.39992916714707,7.26957838718672,3.93776205332557,7.25486977025141,2.89864488701678,2.58127163094416,0,4.31762553310254,2.59910566979068,3.58421509677868,3.93244376368905,4.4311883870295,4.67614808285164,2.47337702157238,7.88723150749411,2.56652954828636,2.54805239706646,7.11066703153331,3.46385665617943,3.29367825117628,2.52762222507392,2.8545969929765,3.88406825470758,2.52351636410202,2.60227990149204,3.04465478312141,4.15107895060905,3.3158980921577,3.41007250693544,1.63366568728578,3.46072954828123,4.62717942143717,0,3.39710384889559,0.883366073841574,1.93950101254089,0,8.19786231632332,12.9856958224342,2.04365644166873,2.15667224110656,1.79970819298022,2.92261522268049,6.29120685500255,5.03250663100489,12.4397808591736,6.95297280769106,6.39288643325826,6.85700547046548,5.84068547043927,3.66621709861139,2.23932547098167,2.52722758433675,2.94618598241064,7.1566243629487,7.12696523743766,8.46292010085141,7.68594570962147,5.71506592871154,3.84341160854549,5.62210347358373,5.17406741478031,5.82033580918674,6.24050064553804,8.2697028357056,8.54863356467542,5.83899223373756,4.87553033131033,6.79081050146213,4.37875387000685,0.702213187313235,1.80143534980301,3.12579849335152,5.38527008592305,4.45599513964083,7.74266864282364,6.15536312521547,5.50939848892731,6.94202007993202,6.0458825635106,5.09719462659276,6.53885917256149,4.60767579757745,4.59668899421467,2.67527071501324,3.50879969820798,2.63460138349261,3.89198614405078,7.14985825118033,11.0107935245834,1.32167513193519,1.05780226665418,4.47905326123991,3.25131340604614,3.73715637834071,3.22693639397348,3.55804870151792,2.28270751335071,2.84717436926707,1.97638745668813,1.00534083520108,3.58121649674071,2.53453313254856,0.898819408654221,2.16138049874694,3.38540164532424,4.36236172192088,4.11294645395024,1.1270773567308,2.8511185898344,3.29719228184964,1.96380295692892,3.16182685621286,2.06654207171443,3.61097074035162,3.70191491765402,1.77871576252289,2.00214126859313,1.57247196090562,1.79889689907883,1.01430060694251,2.894125917029,2.5462585178142,2.87696137450811,1.13494658742525,1.92192989231657,4.31304619582064,4.46569137202204,2.18426371180192,2.77836765741823,1.97337154874103,1.92977408545347,2.21703828199926,3.22135400009824,2.77040459951444,4.41337223015489,6.33663670378956,5.69521275302174,6.9032655856944,3.70753930929818,2.67979744980525,3.5434350343804,3.02964060449226,2.78567635016755,2.07221978239075,2.89298117163023,7.53956419696361,3.26343410291226,5.90117127622843,4.13905119457099,4.65596710964597,5.50894926983355,6.55739781506702,2.7771801992481,6.62567260774139,5.0757036758563,4.52389135238878,6.4521575447189,10.2487390077901,8.49229592366497,4.45291771842384,6.13737301613755,9.09161889277004,5.78378369559253,2.2710413633323,6.41036173202119,2.93196526836437,3.13443233647817,9.2921596837974,7.52619972080442,5.44182402536552,4.52652191414155,2.06711325016541,2.15204603560749,2.58428293168221,3.99887102425256,9.26893183800275,5.05658812697306,3.16255825724996,6.18813259489121,3.40439605753788,8.64293251350289,8.14959707831353,6.85878512101095,6.20690817747958,4.99432689285798,7.40470592709544,7.00269382963578,1.87737366450968,6.35496212591461,3.74898276693435,3.79238381765404,3.06782410722221,3.61877549568935,3.22305328808468,1.80554989719567,1.7488850197791,3.15223013417866,1.19609616558497,4.33412422722767,2.96311243791539,1.50694765603753,1.0935538217682,1.37266903923914,1.01987057996313,2.09927178485487,2.07299960706636,0.954670618015114,4.4287039101359,3.45643094115643,3.56417624711944,2.50905955217362,2.83871332870031,3.641337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| ||
|short_description=p2@Ift46 | |short_description=p2@Ift46 | ||
}} | }} |
Latest revision as of 17:15, 26 September 2015
Short description: | p2@Ift46 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ift46_5end |
Coexpression cluster: | MCL_coexpression_mm9:335 |
Association with transcript: | 0bp_to_NM_023831, uc009pek.1_5end |
EntrezGene: | Ift46 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.28e-18 | 44 |
neurectodermal cell | 4.28e-18 | 44 |
neural cell | 1.26e-17 | 43 |
electrically responsive cell | 2.35e-16 | 39 |
electrically active cell | 2.35e-16 | 39 |
neuron | 1.82e-15 | 33 |
neuronal stem cell | 1.82e-15 | 33 |
neuroblast | 1.82e-15 | 33 |
electrically signaling cell | 1.82e-15 | 33 |
CNS neuron (sensu Vertebrata) | 1.90e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.90e-13 | 23 |
embryonic cell | 1.00e-10 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.87e-28 | 75 |
central nervous system | 3.16e-28 | 73 |
ectoderm-derived structure | 1.01e-26 | 95 |
ectoderm | 1.01e-26 | 95 |
presumptive ectoderm | 1.01e-26 | 95 |
regional part of nervous system | 1.06e-22 | 54 |
neurectoderm | 7.91e-22 | 64 |
neural plate | 7.91e-22 | 64 |
presumptive neural plate | 7.91e-22 | 64 |
ecto-epithelium | 1.91e-20 | 73 |
neural tube | 1.93e-20 | 52 |
neural rod | 1.93e-20 | 52 |
future spinal cord | 1.93e-20 | 52 |
neural keel | 1.93e-20 | 52 |
structure with developmental contribution from neural crest | 2.24e-20 | 92 |
brain | 7.51e-19 | 47 |
future brain | 7.51e-19 | 47 |
regional part of brain | 9.53e-19 | 46 |
pre-chordal neural plate | 1.27e-17 | 49 |
anterior neural tube | 1.08e-16 | 40 |
gray matter | 1.11e-16 | 34 |
regional part of forebrain | 1.74e-16 | 39 |
forebrain | 1.74e-16 | 39 |
future forebrain | 1.74e-16 | 39 |
brain grey matter | 1.48e-14 | 29 |
regional part of telencephalon | 1.48e-14 | 29 |
telencephalon | 1.48e-14 | 29 |
cerebral cortex | 3.28e-11 | 21 |
cerebral hemisphere | 3.28e-11 | 21 |
pallium | 3.28e-11 | 21 |
regional part of cerebral cortex | 5.65e-09 | 17 |
tube | 3.70e-08 | 114 |
anatomical conduit | 5.36e-08 | 122 |