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FFCP PHASE1:Mm9::chr9:44412747..44412783,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13209
|EntrezGene=13209
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=P54823
|UniProt=P54823
|association_with_transcript=-191bp_to_ENSMUST00000098836,ENSMUST00000170489,NM_001110826,NM_007841,NM_181324,uc009pdy.2,uc009pdz.2,uc012grw.1,uc012grx.1_5end
|association_with_transcript=-191bp_to_ENSMUST00000098836,ENSMUST00000170489,NM_001110826,NM_007841,NM_181324,uc009pdy.2,uc009pdz.2,uc012grw.1,uc012grx.1_5end
|cluster_id=chr9:44412747..44412783,+
|description=CAGE_peak_1_at_Ddx6_5end
|description=CAGE_peak_1_at_Ddx6_5end
|id=chr9:44412747..44412783,+
|id=chr9:44412747..44412783,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!1.65e-16!94;UBERON:0007811!4.58e-15!86;UBERON:0000033!1.01e-14!63;UBERON:0003056!1.46e-14!49;UBERON:0003080!6.86e-13!40;UBERON:0002780!1.31e-12!39;UBERON:0001890!1.31e-12!39;UBERON:0006240!1.31e-12!39;UBERON:0000955!2.43e-12!50;UBERON:0006238!2.43e-12!50;UBERON:0002616!6.95e-12!49;UBERON:0001049!7.36e-12!52;UBERON:0005068!7.36e-12!52;UBERON:0006241!7.36e-12!52;UBERON:0007135!7.36e-12!52;UBERON:0004121!3.95e-11!102;UBERON:0000924!3.95e-11!102;UBERON:0006601!3.95e-11!102;UBERON:0002346!1.01e-10!71;UBERON:0003075!1.01e-10!71;UBERON:0007284!1.01e-10!71;UBERON:0001017!1.12e-10!73;UBERON:0005743!1.12e-10!73;UBERON:0000073!2.56e-10!75;UBERON:0001016!2.56e-10!75;UBERON:0002791!3.47e-10!29;UBERON:0003528!3.47e-10!29;UBERON:0001893!3.47e-10!29;UBERON:0002020!1.08e-09!34;UBERON:0000956!6.00e-09!21;UBERON:0001869!6.00e-09!21;UBERON:0000203!6.00e-09!21;UBERON:0000475!5.82e-08!200;UBERON:0002619!8.44e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.46e-14,49;UBERON:0010371,8.67e-14,73;UBERON:0003080,6.86e-13,40;UBERON:0002346,8.12e-13,64;UBERON:0003075,8.12e-13,64;UBERON:0007284,8.12e-13,64;UBERON:0004121,9.97e-13,95;UBERON:0000924,9.97e-13,95;UBERON:0006601,9.97e-13,95;UBERON:0002780,1.31e-12,39;UBERON:0001890,1.31e-12,39;UBERON:0006240,1.31e-12,39;UBERON:0000955,3.43e-12,47;UBERON:0006238,3.43e-12,47;UBERON:0001049,7.36e-12,52;UBERON:0005068,7.36e-12,52;UBERON:0006241,7.36e-12,52;UBERON:0007135,7.36e-12,52;UBERON:0002616,9.87e-12,46;UBERON:0000073,1.12e-11,54;UBERON:0001017,1.12e-10,73;UBERON:0001016,2.56e-10,75;UBERON:0003528,3.47e-10,29;UBERON:0002791,3.47e-10,29;UBERON:0001893,3.47e-10,29;UBERON:0002020,1.08e-09,34;UBERON:0000956,6.00e-09,21;UBERON:0001869,6.00e-09,21;UBERON:0000203,6.00e-09,21;UBERON:0010314,2.15e-07,92;UBERON:0002619,8.44e-07,17
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025988844,16.7270636811575,18.1240927909327,21.3085667288017,29.2593233267689,16.7523802869779,23.2010802192309,21.1255366449555,14.0923234671048,20.932316446157,16.876766026624,24.8897521080381,24.5403664607689,21.6263840628196,25.5838780247744,27.4731252020735,25.4808206954477,17.1524725786464,12.3852902690882,32.2331343040742,23.7188501889492,19.617792818482,24.9447980117366,27.7491378284596,29.0074777980647,24.7602626011136,30.7194216523121,30.6938007842369,39.9323666872199,29.8445508005048,29.139906341186,32.712026157712,44.0625921224515,23.3532295123668,9.32341004171072,4.39597897386431,9.90519236548063,27.8193015406354,23.6479919068489,23.8097111547445,22.5086798033019,17.5550236412377,28.2375921308533,40.0482955761244,29.2176711854092,30.9335728218638,57.546931660734,57.4099362016172,47.9265975164582,49.9856535578885,50.2988073972467,52.8115517986856,34.664974093115,40.3015122135041,26.9759097091532,17.9898970630538,32.4900402073373,23.1642820647018,24.8916335137809,20.6035057238894,22.7852638810189,21.4792629999228,22.8131369901216,18.1081287730633,17.2300373744584,18.5032690450072,17.4029470935508,20.0043350338891,20.04798838846,20.4483773691527,23.9009822465918,23.1102304611004,17.1434626192708,15.9728225543404,21.2208209053116,17.8776092457764,21.7392668759414,20.138276678219,19.5732930973867,25.2546922980329,16.8397101168869,17.9565526930476,20.9983982079788,18.1248247571037,19.6430900721451,21.6911577660352,23.7275131506804,29.4776481966776,19.8841867178597,29.2224633505686,17.0246615541271,26.6915617134614,23.1867835620421
|phase1_expression=33.7914067391115,10.8182376368202,5.91499011206397,9.67885476181856,10.5188103288733,10.5763941304491,10.9797941079897,21.3053483678601,22.6669842664183,19.4273556847255,24.3129514880217,15.0769380501186,22.5984963509192,16.2601948499335,18.6541466616771,14.3757439846776,23.0855419782288,54.2594924416169,58.5478631496505,44.1365237869951,18.0291775120268,20.6525178497841,24.0303806007821,12.6394014006791,11.6998733344257,4.01962374880514,7.75371593086335,7.97243560937789,10.4512880701006,14.1136872665561,8.20402889424627,4.44521471421742,4.30545351309199,0,6.06588401477677,8.14549762256613,10.0042984568561,15.4856703372656,14.0640362014284,16.2292360631877,18.2351761289614,25.2726829434625,20.3914348273085,17.877348152532,15.7134243390248,22.5762505158868,4.69434806608824,7.19483016055474,7.24964403023757,10.4992145500113,10.4989816219022,8.62515386189829,109.226476543586,25.3876749703971,40.3312558970957,10.2903774414379,10.8882707176728,15.9858348606007,45.7235201542691,43.9062512795787,39.2975470173831,8.80995783379743,6.22506357277798,2.2497492932035,0,0.7104801149461,4.79360176829448,7.30014780110954,42.6164306587843,45.0919834027847,47.1127913427096,17.1390590642282,17.2277461942259,49.4862828828414,54.6319184803947,45.041720543891,22.0231761998777,25.154405602782,25.6522910537927,53.6777191061889,54.8925861614458,57.3004707612436,15.0758819460746,16.3201156909187,22.0029476798607,22.0971439105251,28.9014512022179,40.4486797440902,18.2500125932974,20.6310359091524,28.1168554040627,4.30211938490693,10.879541339324,7.55584468292944,5.84798775702902,9.85659151614138,12.4995533917259,13.2935651610885,10.6512261887176,11.3068663843309,29.1545878937729,8.98285341900225,10.1922095882658,7.11066703153331,8.87613268145978,8.36087556067825,9.0994400102661,11.5325718516251,44.2783781036664,23.3054158331775,13.5318554877586,13.3964810457342,16.8349312996923,16.1273225391306,24.693628498498,16.8393232381765,19.7755974187499,21.5453041810668,9.73071607144862,22.9708926925321,19.654895142975,18.4252596191384,24.2309289583559,38.0615036115011,36.8626203991681,14.3055950916811,37.7417642193649,17.3971791988088,21.9831492836402,28.9095934051308,44.8350590762254,46.9947276902113,51.9734717374907,48.5859368927628,29.9214784165767,36.0175604010422,27.1911101480345,30.8529287113031,52.819056512638,20.6233018768745,24.2024023910629,21.6107978167465,25.5688224323596,26.3733431212501,38.1004395247436,41.3807316520065,34.201129464301,32.855328083855,26.9459991166053,30.2569728268511,28.1521798662318,20.8235945806196,23.6340161841758,21.2433821578522,26.1343313238088,21.6947350832158,16.1509033082044,18.5290493122595,21.0280989552739,15.3273071676271,15.7132460187334,14.7650890398032,19.8865577891577,18.495837784256,15.5809784016252,14.8821724640261,20.6570519077707,23.4698338158011,19.9117418395311,23.9684497555479,23.6720923873899,19.8831982898452,16.0271584162467,17.312628020088,47.1049484783645,46.9245032449537,19.1642894130603,13.4869788998408,24.7414370620871,25.5460339046482,18.1703120464152,11.8993279527772,10.4517680607089,13.6962450801043,10.9141684155238,16.1404975629531,16.5881237808178,16.3144307073744,19.3014446247929,11.6846523125049,15.7780776408527,18.3209971394018,23.8981555200883,26.5056549254571,28.1769339182701,24.8454619971283,27.7352056649705,36.540762162856,29.5946993741524,27.455487524206,24.1778040875717,22.9518724894549,10.0793893209631,12.0128476115588,11.9900987019054,7.42044970870017,11.1573066763677,11.3353265083636,12.2220408855082,13.2340223227373,18.159145398804,10.9824565275233,12.9391385874619,23.0727387554472,14.9778083094989,14.3969960429854,9.32866550313943,10.1313139486307,32.1470550889892,26.9077804714088,29.3336957595647,24.7827825231775,20.8874320976767,25.7959636460396,20.2337094753112,26.147908812945,27.1132447862649,27.9045508957456,22.4831223807057,22.6131374307718,25.7300622980184,21.5527097286452,4.52373851817817,7.61467957346193,8.85175691434265,15.7283945393698,25.6880943980467,21.5669503329654,18.5246488275643,18.4303776859192,12.6203287766503,14.055794794679,29.5130054893935,20.5513166239195,23.6166594527338,27.1753469557279,18.2164815753702,23.0882127749936,28.4607200121497,39.5225219198823,28.529957126862,18.8749539887291,30.2969744397652,27.714980659386,10.619611067197,20.6363540731734,22.9765903293211,20.1807435338811,16.5369060013233,16.908933136916,21.9664049192988,23.6296924160379,21.746340081468,24.3348303610578,16.8669773719998,10.3135543248187,34.3844001811326,27.3692862927592,23.1552043971131,28.935499729265,31.743901821967,28.0039043635251,29.947921749586,23.1393361327095,12.4376005273766,15.2519091021951,18.5243854366168,23.4138479176902,32.6158141925729,28.4073876411614,30.3205753767967,34.4695889464629,19.2377352175701,31.7077266437972,17.7705716029767,17.3364969089107,13.1488114432495,21.4740040985348,24.7416552175056,27.9109371311958,53.8831623080521,47.863396694691,62.7427881072084,10.5013767981662,22.6180235410512,19.3153493770506,18.2529025988844,16.7270636811575,18.1240927909327,21.3085667288017,29.2593233267689,16.7523802869779,23.2010802192309,21.1255366449555,14.0923234671048,20.932316446157,16.876766026624,24.8897521080381,24.5403664607689,21.6263840628196,25.5838780247744,27.4731252020735,25.4808206954477,17.1524725786464,12.3852902690882,32.2331343040742,23.7188501889492,19.617792818482,24.9447980117366,27.7491378284596,29.0074777980647,24.7602626011136,30.7194216523121,30.6938007842369,39.9323666872199,29.8445508005048,29.139906341186,32.712026157712,44.0625921224515,23.3532295123668,9.32341004171072,4.39597897386431,9.90519236548063,27.8193015406354,23.6479919068489,23.8097111547445,22.5086798033019,17.5550236412377,28.2375921308533,40.0482955761244,29.2176711854092,30.9335728218638,57.546931660734,57.4099362016172,47.9265975164582,49.9856535578885,50.2988073972467,52.8115517986856,34.664974093115,40.3015122135041,26.9759097091532,17.9898970630538,32.4900402073373,23.1642820647018,24.8916335137809,20.6035057238894,22.7852638810189,21.4792629999228,22.8131369901216,18.1081287730633,17.2300373744584,18.5032690450072,17.4029470935508,20.0043350338891,20.04798838846,20.4483773691527,23.9009822465918,23.1102304611004,17.1434626192708,15.9728225543404,21.2208209053116,17.8776092457764,21.7392668759414,20.138276678219,19.5732930973867,25.2546922980329,16.8397101168869,17.9565526930476,20.9983982079788,18.1248247571037,19.6430900721451,21.6911577660352,23.7275131506804,29.4776481966776,19.8841867178597,29.2224633505686,17.0246615541271,26.6915617134614,23.1867835620421
|short_description=p1@Ddx6
|short_description=p1@Ddx6
}}
}}

Latest revision as of 17:07, 26 September 2015

Short description:p1@Ddx6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ddx6_5end
Coexpression cluster:NA
Association with transcript: -191bp_to_ENSMUST00000098836, ENSMUST00000170489, NM_001110826, NM_007841, NM_181324, uc009pdy.2, uc009pdz.2, uc012grw.1, uc012grx.1_5end
EntrezGene:Ddx6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ddx6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G733.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.68
CD326+ enterocyte, pool2.CNhs13197.11849-124I410.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.98
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E921.31
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E722.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F219.43
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E624.31
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F115.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E422.60
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E816.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A118.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A314.38
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A523.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A254.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A458.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A644.14
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.03
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H220.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I924.03
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D112.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.70
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I17.75
GP2+ M cell, pool3.CNhs13240.11847-124I27.97
Ileum epithelium, pool1.CNhs13199.10252-104B910.45
Ileum epithelium, pool2.CNhs13232.10253-104C114.11
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.07
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F710.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G815.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G918.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H225.27
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H420.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D817.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D915.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B322.58
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.19
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.25
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.50
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2109.23
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I925.39
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A140.33
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.89
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C515.99
Mouse Granule cells, donor1.CNhs12131.11713-123C345.72
Mouse Granule cells, donor2.CNhs12357.11731-123E343.91
Mouse Granule cells, donor3.CNhs12108.11636-122C739.30
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.81
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C84.79
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D542.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F545.09
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D947.11
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.23
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D249.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F254.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D645.04
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D322.02
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F325.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.65
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D453.68
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F454.89
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D857.30
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.08
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I622.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.10
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F628.90
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E140.45
Mouse Schwann, donor1.CNhs12507.11728-123D918.25
Mouse Schwann, donor2.CNhs12573.11746-123F920.63
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G328.12
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.88
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.86
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I713.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.31
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G629.15
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.36
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.10
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.53
accessory axillary lymph node, adult.CNhs10475.1063-29H944.28
adrenal gland, adult.CNhs10508.49-24D723.31
adrenal gland, embryo E14.CNhs11038.406-44C513.53
adrenal gland, embryo E16.CNhs11004.1254-43D613.40
adrenal gland, embryo E17.CNhs11043.1263-45I116.83
adrenal gland, embryo E18.CNhs11026.1262-18F516.13
adrenal gland, neonate N00.CNhs11191.1311-23C124.69
adrenal gland, neonate N25.CNhs11223.1377-27I316.84
amnion, adult pregnant day17.5.CNhs10488.583-22A819.78
aorta, adult.CNhs10498.46-23H121.55
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F522.97
bone (os femoris), neonate N16.CNhs11225.1525-43A619.65
bone (os femoris), neonate N20.CNhs11195.1350-25C318.43
cecum, adult.CNhs10467.37-13H424.23
cerebellum, adult.CNhs10494.15-8B238.06
cerebellum, neonate N30.CNhs11135.1395-42I236.86
colon, adult.CNhs10468.36-18H714.31
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C737.74
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D117.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D421.98
corpora quadrigemina, adult.CNhs10501.16-22A428.91
corpus striatum, adult.CNhs10487.19-21D844.84
corpus striatum, neonate N00.CNhs11226.630-43F146.99
cortex, adult.CNhs10473.12-14D551.97
cortex, neonate N30.CNhs11107.1392-42F248.59
diencephalon, adult.CNhs10482.20-12F229.92
diencephalon, neonate N30.CNhs11201.1388-42B236.02
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B127.19
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A230.85
epididymis, adult.CNhs10490.58-23B252.82
eyeball, adult.CNhs10484.31-12G420.62
eyeball, embryo E12.CNhs11016.345-16C624.20
eyeball, embryo E14.CNhs10521.399-16E221.61
eyeball, embryo E15.CNhs10593.426-16C925.57
eyeball, embryo E17.CNhs11023.1261-18D426.37
eyeball, neonate N00.CNhs11207.633-15C638.10
eyeball, neonate N01.CNhs11140.1532-43E741.38
eyeball, neonate N02.CNhs11205.1551-44G834.20
eyeball, neonate N16.CNhs11188.777-19A232.86
forelimb, embryo E11.CNhs10596.335-25E226.95
forelimb, embryo E12.CNhs10600.359-14H230.26
forelimb, embryo E13.CNhs10589.384-1E228.15
forelimb, embryo E14.CNhs10577.413-26A820.82
forelimb, embryo E15.CNhs11007.437-20E723.63
forelimb, embryo E17.CNhs10598.1517-43C421.24
forelimb, embryo E18.CNhs11008.1520-43B526.13
gonad, embryo E13.CNhs11044.1564-45I621.69
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C816.15
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D218.53
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D521.03
heart, embryo E11.CNhs10586.331-24E915.33
heart, embryo E12.CNhs11015.353-12F515.71
heart, embryo E13.CNhs11013.376-3I914.77
heart, embryo E14.CNhs10597.403-26D419.89
heart, embryo E15.CNhs11017.431-16C818.50
heart, embryo E16.CNhs11021.457-17C615.58
heart, embryo E17.CNhs11025.479-18E514.88
heart, embryo E18.CNhs11030.1283-20G320.66
heart, neonate N00.CNhs11213.639-21E323.47
heart, neonate N03.CNhs11221.1349-25I219.91
heart, neonate N10.CNhs11118.749-24G123.97
heart, neonate N16.CNhs11209.782-15G123.67
heart, neonate N20.CNhs11127.821-26I619.88
heart, neonate N25.CNhs11196.1351-25D316.03
heart, neonate N30.CNhs11202.1390-42D217.31
hippocampus, adult.CNhs10478.13-16E847.10
hippocampus, neonate N00.CNhs11228.627-43G146.92
intestinal mucosa, adult.CNhs10506.860-29I319.16
intestine, adult.CNhs10496.178-9A313.49
intestine, embryo E12.CNhs11019.1251-16I524.74
intestine, embryo E13.CNhs11010.381-16D525.55
intestine, embryo E15.CNhs10602.976-16D818.17
intestine, embryo E16.CNhs10585.463-22H411.90
intestine, embryo E17.CNhs10582.482-18D310.45
intestine, embryo E18.CNhs10526.1289-20F713.70
intestine, neonate N00.CNhs11126.644-26D110.91
intestine, neonate N01.CNhs11192.1322-23E916.14
intestine, neonate N06.CNhs11102.688-20B816.59
intestine, neonate N07.CNhs11095.720-20F216.31
intestine, neonate N10.CNhs11098.755-23A519.30
intestine, neonate N20.CNhs11187.827-18D111.68
intestine, neonate N25.CNhs11121.1352-25E315.78
intestine, neonate N30.CNhs11131.1384-42G118.32
kidney, embryo E14.CNhs10606.411-4I923.90
kidney, embryo E15.CNhs10997.434-16F826.51
kidney, embryo E16.CNhs10584.464-22A528.18
kidney, embryo E17.CNhs11028.483-18I224.85
kidney, embryo E18.CNhs11001.1288-20C727.74
kidney, neonate N00.CNhs11214.646-21G736.54
kidney, neonate N10.CNhs11206.758-6D529.59
kidney, neonate N20.CNhs11113.832-19I127.46
kidney, neonate N25.CNhs11122.1353-25F324.18
kidney, neonate N30.CNhs11203.1385-42H122.95
liver, adult pregnant day01.CNhs10466.508-5B210.08
liver, embryo E12.CNhs10601.355-15F812.01
liver, embryo E13.CNhs10524.378-3H611.99
liver, embryo E14.CNhs10594.409-16E17.42
liver, embryo E15.CNhs10520.433-16D711.16
liver, embryo E16.CNhs10523.462-17F511.34
liver, embryo E17.CNhs10510.481-18A312.22
liver, embryo E18.CNhs10579.499-43G413.23
liver, neonate N00.CNhs11117.641-24F418.16
liver, neonate N03.CNhs11123.1345-25G210.98
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H223.07
liver, neonate N10.CNhs11115.751-24B914.98
liver, neonate N20.CNhs11220.823-25A314.40
liver, neonate N25.CNhs11198.1368-26H19.33
liver, neonate N30.CNhs11106.1382-42D110.13
lung, adult.CNhs10474.28-22B132.15
lung, embryo E12.CNhs10522.354-16G226.91
lung, embryo E14.CNhs10604.404-26F829.33
lung, embryo E15.CNhs11020.432-17C524.78
lung, embryo E16.CNhs10998.458-17B620.89
lung, embryo E17.CNhs10605.480-44A625.80
lung, embryo E18.CNhs10583.1287-20I620.23
lung, neonate N00.CNhs11224.640-42C626.15
lung, neonate N06.CNhs11212.683-20E527.11
lung, neonate N07.CNhs11111.715-19A327.90
lung, neonate N10.CNhs11219.750-23E622.48
lung, neonate N20.CNhs11109.822-18A422.61
lung, neonate N25.CNhs11119.1359-25C725.73
lung, neonate N30.CNhs11133.1394-42H221.55
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.61
mammary gland, adult lactating day02.CNhs10480.595-22B68.85
mammary gland, adult pregnant day19.CNhs10476.588-5H215.73
medulla oblongata, adult.CNhs10477.17-12C225.69
medulla oblongata, neonate N30.CNhs11200.1396-42A321.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C718.52
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C218.43
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.62
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.06
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E329.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D720.55
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D823.62
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D927.18
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D418.22
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D628.46
olfactory brain, adult.CNhs10489.18-22I939.52
ovary, adult.CNhs10507.91-2I728.53
ovary, embryo E18.CNhs11040.505-44H718.87
ovary, neonate N00.CNhs11217.1299-22I430.30
oviduct, adult pregnant day01.CNhs10500.988-6G627.71
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F420.64
pancreas, embryo E15.CNhs11042.1556-45F222.98
pancreas, embryo E16.CNhs11003.460-26E520.18
pancreas, embryo E17.CNhs10599.1558-45G316.54
pancreas, embryo E18.CNhs10580.1535-43I716.91
pancreas, neonate N00.CNhs11105.645-26G921.97
pancreas, neonate N01.CNhs11138.1531-43D723.63
pancreas, neonate N02.CNhs11139.1539-43D821.75
pancreas, neonate N16.CNhs11136.787-43B624.33
pancreas, neonate N25.CNhs11094.1555-45E216.87
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G834.38
pituitary gland, embryo E12.CNhs11018.346-16E627.37
pituitary gland, embryo E13.CNhs11009.370-44C723.16
pituitary gland, embryo E14.CNhs11037.398-44A528.94
pituitary gland, embryo E15.CNhs10592.427-16B931.74
pituitary gland, embryo E16.CNhs11036.449-43F628.00
pituitary gland, embryo E17.CNhs11039.1265-44F529.95
pituitary gland, neonate N00.CNhs11190.1308-22E923.14
placenta, adult pregnant day10.CNhs10472.539-13I712.44
placenta, adult pregnant day17.CNhs10464.577-18G315.25
prostate, adult.CNhs10470.859-1F818.52
skin, adult.CNhs10492.30-1C323.41
skin, neonate N00.CNhs11124.650-25G432.62
skin, neonate N03.CNhs11215.662-22H328.41
skin, neonate N06.CNhs11097.693-20I530.32
skin, neonate N10.CNhs11108.762-6C434.47
small intestine, neonate N16.CNhs11114.790-21I119.24
spinal cord, adult.CNhs10505.24-13C931.71
spleen, adult.CNhs10465.25-2G217.77
spleen, embryo E16.CNhs11035.461-43C117.34
spleen, embryo E18.CNhs11011.1271-21F213.15
spleen, neonate N10.CNhs11116.752-24D121.47
spleen, neonate N20.CNhs11112.824-19H124.74
spleen, neonate N25.CNhs11099.1354-25G327.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C653.88
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C947.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D362.74
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E322.62
stomach, embryo E15.CNhs10603.1252-16G819.32
stomach, embryo E16.CNhs11022.459-17D418.25
stomach, embryo E17.CNhs11006.1035-18D516.73
stomach, embryo E18.CNhs10999.1286-20C618.12
stomach, neonate N03.CNhs11193.1340-24B821.31
stomach, neonate N07.CNhs11210.718-18A929.26
stomach, neonate N25.CNhs11104.1355-25E416.75
stomach, neonate N30.CNhs11134.1386-42I123.20
submandibular gland, adult.CNhs10469.59-29C121.13
testis, adult.CNhs10504.57-7G514.09
testis, embryo E13.CNhs11031.389-23F520.93
testis, embryo E15.CNhs11034.443-27C516.88
testis, embryo E16.CNhs11033.470-26G524.89
testis, embryo E17.CNhs11029.486-18I524.54
testis, embryo E18.CNhs11027.503-18G521.63
testis, neonate N00.CNhs11189.1300-22B725.58
testis, neonate N07.CNhs11222.726-26I427.47
testis, neonate N10.CNhs11204.763-44D925.48
testis, neonate N20.CNhs11110.839-18H317.15
testis, neonate N30.CNhs11130.1391-42E212.39
thymus, adult.CNhs10471.38-12B532.23
thymus, embryo E14.CNhs11041.402-44I423.72
thymus, embryo E15.CNhs11005.430-45I219.62
thymus, embryo E16.CNhs11002.456-26C524.94
thymus, embryo E17.CNhs10581.478-18C127.75
thymus, embryo E18.CNhs10595.1273-19G429.01
thymus, neonate N02.CNhs11181.1541-43F824.76
thymus, neonate N03.CNhs11137.2104-43C730.72
thymus, neonate N06.CNhs11197.681-26C430.69
thymus, neonate N07.CNhs11211.713-19D339.93
thymus, neonate N10.CNhs11194.748-24E429.84
thymus, neonate N20.CNhs11186.820-7A229.14
thymus, neonate N25.CNhs11125.1362-25G732.71
thymus, neonate N30.CNhs11132.1393-42G244.06
tongue, adult.CNhs10499.32-1B423.35
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H39.32
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.40
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.91
urinary bladder, adult.CNhs10481.879-12E427.82
uterus, adult pregnant day19.CNhs10497.590-15F523.65
uterus, adult.CNhs10509.92-27E523.81
vagina, adult.CNhs10502.89-27D522.51
vesicular gland, adult.CNhs10491.51-27F817.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A128.24
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A240.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A329.22
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D730.93
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A457.55
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A557.41
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A647.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A749.99
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A850.30
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A952.81
whole body, embryo E11.CNhs11014.324-5I834.66
whole body, embryo E12.CNhs10587.857-27C940.30
whole body, embryo E13.CNhs10512.372-23H226.98
whole body, embryo E14.5.CNhs10578.420-27D217.99
whole body, embryo E14.CNhs10519.395-14B132.49
whole body, embryo E16.CNhs10514.453-14F223.16
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G524.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G522.79
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G521.48
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G522.81
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G518.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.23
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G520.45
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G523.90
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G523.11
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G521.22
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.88
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G521.74
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.14
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G525.25
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G521.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G518.12
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G521.69
whole body, embryo E17.5.CNhs10513.490-9F923.73
whole body, embryo E17.CNhs10517.475-3I529.48
whole body, embryo E18.CNhs10516.493-3B319.88
whole body, neonate N00.CNhs10525.657-19C229.22
whole body, neonate N01.CNhs10576.659-23C617.02
whole body, neonate N06.CNhs10515.692-21D126.69
whole body, neonate N10.CNhs10518.761-6B423.19





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate1.46e-1449
ecto-epithelium8.67e-1473
anterior neural tube6.86e-1340
neurectoderm8.12e-1364
neural plate8.12e-1364
presumptive neural plate8.12e-1364
ectoderm-derived structure9.97e-1395
ectoderm9.97e-1395
presumptive ectoderm9.97e-1395
regional part of forebrain1.31e-1239
forebrain1.31e-1239
future forebrain1.31e-1239
brain3.43e-1247
future brain3.43e-1247
neural tube7.36e-1252
neural rod7.36e-1252
future spinal cord7.36e-1252
neural keel7.36e-1252
regional part of brain9.87e-1246
regional part of nervous system1.12e-1154
central nervous system1.12e-1073
nervous system2.56e-1075
brain grey matter3.47e-1029
regional part of telencephalon3.47e-1029
telencephalon3.47e-1029
gray matter1.08e-0934
cerebral cortex6.00e-0921
cerebral hemisphere6.00e-0921
pallium6.00e-0921
structure with developmental contribution from neural crest2.15e-0792
regional part of cerebral cortex8.44e-0717
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