FFCP PHASE1:Mm9::chr9:43915826..43915844,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=148 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:43915826..43915844,+ | |||
|description=CAGE_peak_at_chr9:43915826..43915844,+ | |description=CAGE_peak_at_chr9:43915826..43915844,+ | ||
|id=chr9:43915826..43915844,+ | |id=chr9:43915826..43915844,+ | ||
|ontology_enrichment_celltype=CL:0002453!9.95e-30!8;CL:0000333!1.19e-23!10;CL:0000095!1.19e-23!10;CL:0000243!1.19e-23!10;CL:0000123!1.19e-23!10;CL:0000125!1.19e-23!10;CL:0000030!1.19e-23!10;CL:0000339!1.19e-23!10;CL:0000128!1.04e-20!6;CL:0000126!1.04e-20!6;CL:0000127!1.04e-20!6;CL:0000055!4.91e-12!50;CL:0002604!3.40e-11!2;CL:0002605!3.40e-11!2;CL:0002603!5.33e-11!2;CL:0000864!8.31e-11!2;CL:0000878!8.31e-11!2;CL:0000129!8.31e-11!2;CL:0002319!7.11e-10!43;CL:0000221!1.29e-09!44;CL:0000133!1.29e-09!44;CL:0002321!4.77e-08!70;CL:0000220!4.77e-08!70;CL:0002610!5.15e-07!3 | |ontology_enrichment_celltype=CL:0002453!9.95e-30!8;CL:0000333!1.19e-23!10;CL:0000095!1.19e-23!10;CL:0000243!1.19e-23!10;CL:0000123!1.19e-23!10;CL:0000125!1.19e-23!10;CL:0000030!1.19e-23!10;CL:0000339!1.19e-23!10;CL:0000128!1.04e-20!6;CL:0000126!1.04e-20!6;CL:0000127!1.04e-20!6;CL:0000055!4.91e-12!50;CL:0002604!3.40e-11!2;CL:0002605!3.40e-11!2;CL:0002603!5.33e-11!2;CL:0000864!8.31e-11!2;CL:0000878!8.31e-11!2;CL:0000129!8.31e-11!2;CL:0002319!7.11e-10!43;CL:0000221!1.29e-09!44;CL:0000133!1.29e-09!44;CL:0002321!4.77e-08!70;CL:0000220!4.77e-08!70;CL:0002610!5.15e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000128,3.91e-58,6;CL:0000126,3.91e-58,6;CL:0000127,3.91e-58,6;CL:0002605,1.66e-44,2;CL:0002604,1.66e-44,2;CL:0002453,6.68e-44,8;CL:0002603,1.24e-43,2;CL:0000333,2.37e-35,10;CL:0000095,2.37e-35,10;CL:0000243,2.37e-35,10;CL:0000123,2.37e-35,10;CL:0000125,2.37e-35,10;CL:0000030,2.37e-35,10;CL:0000339,2.37e-35,10;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44;CL:0000219,2.91e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004684!5.15e-07!3;UBERON:0002275!5.15e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.79e-22,4;UBERON:0002680,1.79e-22,4;UBERON:0001895,1.79e-22,4;UBERON:0010092,1.79e-22,4;UBERON:0006215,1.79e-22,4;UBERON:0004733,2.21e-15,6;UBERON:0004732,2.21e-15,6;UBERON:0002028,2.21e-15,6;UBERON:0007277,2.21e-15,6;UBERON:0001954,1.34e-13,7;UBERON:0003022,1.34e-13,7;UBERON:0002421,1.34e-13,7;UBERON:0000349,1.34e-13,7;UBERON:0002600,1.34e-13,7;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0003076,3.15e-08,12;UBERON:0003057,3.15e-08,12;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,2.34717403304412,1.52617609466313,3.07560655828261,5.63846707315422,0.419959264876088,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0.898800331555214,0.768436610643109,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,2.34717403304412,1.52617609466313,3.07560655828261,5.63846707315422,0.419959264876088,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0.898800331555214,0.768436610643109,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:43915826..43915844,+ | |short_description=p@chr9:43915826..43915844,+ | ||
}} | }} |
Latest revision as of 03:39, 5 August 2015
Short description: | p@chr9:43915826..43915844, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:43915826..43915844, + |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 3.91e-58 | 6 |
macroglial cell | 3.91e-58 | 6 |
astrocyte | 3.91e-58 | 6 |
astrocyte of the cerebral cortex | 1.66e-44 | 2 |
astrocyte of the hippocampus | 1.66e-44 | 2 |
oligodendrocyte precursor cell | 6.68e-44 | 8 |
astrocyte of the cerebellum | 1.24e-43 | 2 |
migratory neural crest cell | 2.37e-35 | 10 |
neuron associated cell | 2.37e-35 | 10 |
glial cell (sensu Vertebrata) | 2.37e-35 | 10 |
neuron associated cell (sensu Vertebrata) | 2.37e-35 | 10 |
glial cell | 2.37e-35 | 10 |
glioblast | 2.37e-35 | 10 |
glioblast (sensu Vertebrata) | 2.37e-35 | 10 |
neural cell | 6.31e-09 | 43 |
ectodermal cell | 9.66e-09 | 44 |
neurectodermal cell | 9.66e-09 | 44 |
motile cell | 2.91e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.79e-22 | 4 |
regional part of metencephalon | 1.79e-22 | 4 |
metencephalon | 1.79e-22 | 4 |
future metencephalon | 1.79e-22 | 4 |
rhombic lip | 1.79e-22 | 4 |
segmental subdivision of hindbrain | 2.21e-15 | 6 |
segmental subdivision of nervous system | 2.21e-15 | 6 |
hindbrain | 2.21e-15 | 6 |
presumptive hindbrain | 2.21e-15 | 6 |
Ammon's horn | 1.34e-13 | 7 |
lobe parts of cerebral cortex | 1.34e-13 | 7 |
hippocampal formation | 1.34e-13 | 7 |
limbic system | 1.34e-13 | 7 |
limbic lobe | 1.34e-13 | 7 |
regional part of brain | 2.15e-08 | 46 |
brain | 3.12e-08 | 47 |
future brain | 3.12e-08 | 47 |
posterior neural tube | 3.15e-08 | 12 |
chordal neural plate | 3.15e-08 | 12 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |
regional part of nervous system | 2.91e-07 | 54 |