FFCP PHASE1:Mm9::chr1:72895848..72895864,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=336 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:72895848..72895864,+ | |||
|description=CAGE_peak_at_chr1:72895848..72895864,+ | |description=CAGE_peak_at_chr1:72895848..72895864,+ | ||
|id=chr1:72895848..72895864,+ | |id=chr1:72895848..72895864,+ | ||
|ontology_enrichment_celltype=CL:0002453!2.44e-15!8;CL:0000128!4.81e-12!6;CL:0000126!4.81e-12!6;CL:0000127!4.81e-12!6;CL:0000333!6.87e-12!10;CL:0000095!6.87e-12!10;CL:0000243!6.87e-12!10;CL:0000123!6.87e-12!10;CL:0000125!6.87e-12!10;CL:0000030!6.87e-12!10;CL:0000339!6.87e-12!10 | |ontology_enrichment_celltype=CL:0002453!2.44e-15!8;CL:0000128!4.81e-12!6;CL:0000126!4.81e-12!6;CL:0000127!4.81e-12!6;CL:0000333!6.87e-12!10;CL:0000095!6.87e-12!10;CL:0000243!6.87e-12!10;CL:0000123!6.87e-12!10;CL:0000125!6.87e-12!10;CL:0000030!6.87e-12!10;CL:0000339!6.87e-12!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,6.00e-50,8;CL:0000333,7.38e-40,10;CL:0000095,7.38e-40,10;CL:0000243,7.38e-40,10;CL:0000123,7.38e-40,10;CL:0000125,7.38e-40,10;CL:0000030,7.38e-40,10;CL:0000339,7.38e-40,10;CL:0000128,2.65e-38,6;CL:0000126,2.65e-38,6;CL:0000127,2.65e-38,6;CL:0002605,2.15e-14,2;CL:0002604,2.15e-14,2;CL:0002603,7.05e-14,2;CL:0000878,3.47e-13,2;CL:0000129,3.47e-13,2;CL:0002319,9.94e-09,43;CL:0000221,1.64e-08,44;CL:0000133,1.64e-08,44;CL:0002194,4.87e-07,4;CL:0000766,4.87e-07,4;CL:0000234,4.87e-07,4;CL:0000576,4.87e-07,4;CL:0000235,4.87e-07,4;CL:0000864,4.87e-07,4;CL:0002009,4.87e-07,4;CL:0000040,4.87e-07,4;CL:0000559,4.87e-07,4;CL:0000219,8.80e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.07e-10!22;UBERON:0007499!8.07e-10!22;UBERON:0006925!8.07e-10!22;UBERON:0009497!8.07e-10!22;UBERON:0000015!8.07e-10!22;UBERON:0002423!8.07e-10!22;UBERON:0006235!8.07e-10!22;UBERON:0008835!8.07e-10!22;UBERON:0003894!8.07e-10!22;UBERON:0004161!8.07e-10!22;UBERON:0008836!8.07e-10!22;UBERON:0009854!2.94e-09!23;UBERON:0009856!2.94e-09!23;UBERON:0002365!2.83e-08!25;UBERON:0002330!2.83e-08!25;UBERON:0004111!3.19e-07!122;UBERON:0000025!7.22e-07!114 | |ontology_enrichment_uberon=UBERON:0002107!8.07e-10!22;UBERON:0007499!8.07e-10!22;UBERON:0006925!8.07e-10!22;UBERON:0009497!8.07e-10!22;UBERON:0000015!8.07e-10!22;UBERON:0002423!8.07e-10!22;UBERON:0006235!8.07e-10!22;UBERON:0008835!8.07e-10!22;UBERON:0003894!8.07e-10!22;UBERON:0004161!8.07e-10!22;UBERON:0008836!8.07e-10!22;UBERON:0009854!2.94e-09!23;UBERON:0009856!2.94e-09!23;UBERON:0002365!2.83e-08!25;UBERON:0002330!2.83e-08!25;UBERON:0004111!3.19e-07!122;UBERON:0000025!7.22e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.47e-10,22;UBERON:0007499,5.47e-10,22;UBERON:0006925,5.47e-10,22;UBERON:0009497,5.47e-10,22;UBERON:0000015,5.47e-10,22;UBERON:0002423,5.47e-10,22;UBERON:0006235,5.47e-10,22;UBERON:0008835,5.47e-10,22;UBERON:0003894,5.47e-10,22;UBERON:0004161,5.47e-10,22;UBERON:0008836,5.47e-10,22;UBERON:0009854,1.54e-09,23;UBERON:0009856,1.54e-09,23;UBERON:0002365,9.47e-09,25;UBERON:0002330,9.47e-09,25;UBERON:0002037,2.22e-07,4;UBERON:0002680,2.22e-07,4;UBERON:0001895,2.22e-07,4;UBERON:0010092,2.22e-07,4;UBERON:0006215,2.22e-07,4 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9119567217402,6.75877984779384,7.0299578475031,18.2764105129826,1.39986421625363,4.31257693094915,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,1.49800055259202,1.92109152660777,0.207379224616955,0,0.420649922702764,0,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0.860423876981386,0.679971333707751,0,0.649776417447669,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0.390361328888111,0,0.360124259610698,0,0.136072998302656,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,6.80967952455149,1.09824565275233,4.31304619582064,2.23284568601102,1.5601883655728,0,0.358794827043824,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9119567217402,6.75877984779384,7.0299578475031,18.2764105129826,1.39986421625363,4.31257693094915,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,1.49800055259202,1.92109152660777,0.207379224616955,0,0.420649922702764,0,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0.860423876981386,0.679971333707751,0,0.649776417447669,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0.390361328888111,0,0.360124259610698,0,0.136072998302656,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,6.80967952455149,1.09824565275233,4.31304619582064,2.23284568601102,1.5601883655728,0,0.358794827043824,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p@chr1:72895848..72895864,+ | |short_description=p@chr1:72895848..72895864,+ | ||
}} | }} |
Latest revision as of 23:18, 5 August 2015
Short description: | p@chr1:72895848..72895864, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72895848..72895864, + |
Coexpression cluster: | MCL_coexpression_mm9:336 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 6.00e-50 | 8 |
migratory neural crest cell | 7.38e-40 | 10 |
neuron associated cell | 7.38e-40 | 10 |
glial cell (sensu Vertebrata) | 7.38e-40 | 10 |
neuron associated cell (sensu Vertebrata) | 7.38e-40 | 10 |
glial cell | 7.38e-40 | 10 |
glioblast | 7.38e-40 | 10 |
glioblast (sensu Vertebrata) | 7.38e-40 | 10 |
oligodendrocyte | 2.65e-38 | 6 |
macroglial cell | 2.65e-38 | 6 |
astrocyte | 2.65e-38 | 6 |
astrocyte of the cerebral cortex | 2.15e-14 | 2 |
astrocyte of the hippocampus | 2.15e-14 | 2 |
astrocyte of the cerebellum | 7.05e-14 | 2 |
central nervous system macrophage | 3.47e-13 | 2 |
microglial cell | 3.47e-13 | 2 |
neural cell | 9.94e-09 | 43 |
ectodermal cell | 1.64e-08 | 44 |
neurectodermal cell | 1.64e-08 | 44 |
monopoietic cell | 4.87e-07 | 4 |
myeloid leukocyte | 4.87e-07 | 4 |
phagocyte | 4.87e-07 | 4 |
monocyte | 4.87e-07 | 4 |
macrophage | 4.87e-07 | 4 |
tissue-resident macrophage | 4.87e-07 | 4 |
macrophage dendritic cell progenitor | 4.87e-07 | 4 |
monoblast | 4.87e-07 | 4 |
promonocyte | 4.87e-07 | 4 |
motile cell | 8.80e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
liver | 5.47e-10 | 22 |
epithelial sac | 5.47e-10 | 22 |
digestive gland | 5.47e-10 | 22 |
epithelium of foregut-midgut junction | 5.47e-10 | 22 |
anatomical boundary | 5.47e-10 | 22 |
hepatobiliary system | 5.47e-10 | 22 |
foregut-midgut junction | 5.47e-10 | 22 |
hepatic diverticulum | 5.47e-10 | 22 |
liver primordium | 5.47e-10 | 22 |
septum transversum | 5.47e-10 | 22 |
liver bud | 5.47e-10 | 22 |
digestive tract diverticulum | 1.54e-09 | 23 |
sac | 1.54e-09 | 23 |
exocrine gland | 9.47e-09 | 25 |
exocrine system | 9.47e-09 | 25 |
cerebellum | 2.22e-07 | 4 |
regional part of metencephalon | 2.22e-07 | 4 |
metencephalon | 2.22e-07 | 4 |
future metencephalon | 2.22e-07 | 4 |
rhombic lip | 2.22e-07 | 4 |