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FFCP PHASE1:Mm9::chr1:59970327..59970380,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=663
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr1:59970327..59970380,+
|description=CAGE_peak_at_chr1:59970327..59970380,+
|description=CAGE_peak_at_chr1:59970327..59970380,+
|id=chr1:59970327..59970380,+
|id=chr1:59970327..59970380,+
|ontology_enrichment_celltype=CL:0000117!9.75e-09!23;CL:0000337!9.75e-09!23
|ontology_enrichment_celltype=CL:0000117!9.75e-09!23;CL:0000337!9.75e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.02e-09,23;CL:0000337,4.02e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.65e-15!52;UBERON:0005068!3.65e-15!52;UBERON:0006241!3.65e-15!52;UBERON:0007135!3.65e-15!52;UBERON:0002020!1.11e-14!34;UBERON:0000955!4.76e-14!50;UBERON:0006238!4.76e-14!50;UBERON:0002616!1.98e-13!49;UBERON:0001017!5.66e-13!73;UBERON:0005743!5.66e-13!73;UBERON:0000073!2.24e-12!75;UBERON:0001016!2.24e-12!75;UBERON:0000033!2.76e-12!63;UBERON:0002791!7.46e-12!29;UBERON:0003528!7.46e-12!29;UBERON:0001893!7.46e-12!29;UBERON:0002346!1.19e-11!71;UBERON:0003075!1.19e-11!71;UBERON:0007284!1.19e-11!71;UBERON:0003080!1.36e-11!40;UBERON:0002780!4.48e-11!39;UBERON:0001890!4.48e-11!39;UBERON:0006240!4.48e-11!39;UBERON:0003056!1.77e-10!49;UBERON:0004121!1.51e-09!102;UBERON:0000924!1.51e-09!102;UBERON:0006601!1.51e-09!102;UBERON:0002619!4.77e-08!17;UBERON:0000956!7.48e-08!21;UBERON:0001869!7.48e-08!21;UBERON:0000203!7.48e-08!21;UBERON:0007811!1.49e-07!86;UBERON:0002021!1.81e-07!10;UBERON:0000411!1.81e-07!10;UBERON:0001950!1.81e-07!10
|ontology_enrichment_uberon=UBERON:0001049!3.65e-15!52;UBERON:0005068!3.65e-15!52;UBERON:0006241!3.65e-15!52;UBERON:0007135!3.65e-15!52;UBERON:0002020!1.11e-14!34;UBERON:0000955!4.76e-14!50;UBERON:0006238!4.76e-14!50;UBERON:0002616!1.98e-13!49;UBERON:0001017!5.66e-13!73;UBERON:0005743!5.66e-13!73;UBERON:0000073!2.24e-12!75;UBERON:0001016!2.24e-12!75;UBERON:0000033!2.76e-12!63;UBERON:0002791!7.46e-12!29;UBERON:0003528!7.46e-12!29;UBERON:0001893!7.46e-12!29;UBERON:0002346!1.19e-11!71;UBERON:0003075!1.19e-11!71;UBERON:0007284!1.19e-11!71;UBERON:0003080!1.36e-11!40;UBERON:0002780!4.48e-11!39;UBERON:0001890!4.48e-11!39;UBERON:0006240!4.48e-11!39;UBERON:0003056!1.77e-10!49;UBERON:0004121!1.51e-09!102;UBERON:0000924!1.51e-09!102;UBERON:0006601!1.51e-09!102;UBERON:0002619!4.77e-08!17;UBERON:0000956!7.48e-08!21;UBERON:0001869!7.48e-08!21;UBERON:0000203!7.48e-08!21;UBERON:0007811!1.49e-07!86;UBERON:0002021!1.81e-07!10;UBERON:0000411!1.81e-07!10;UBERON:0001950!1.81e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.79e-19,54;UBERON:0001049,8.44e-18,52;UBERON:0005068,8.44e-18,52;UBERON:0006241,8.44e-18,52;UBERON:0007135,8.44e-18,52;UBERON:0002020,2.15e-16,34;UBERON:0001017,2.79e-15,73;UBERON:0001016,2.22e-14,75;UBERON:0000955,2.36e-14,47;UBERON:0006238,2.36e-14,47;UBERON:0002346,3.96e-14,64;UBERON:0003075,3.96e-14,64;UBERON:0007284,3.96e-14,64;UBERON:0002616,1.38e-13,46;UBERON:0003528,9.56e-13,29;UBERON:0002791,9.56e-13,29;UBERON:0001893,9.56e-13,29;UBERON:0003080,3.83e-12,40;UBERON:0010371,8.01e-12,73;UBERON:0002780,1.70e-11,39;UBERON:0001890,1.70e-11,39;UBERON:0006240,1.70e-11,39;UBERON:0004121,7.99e-11,95;UBERON:0000924,7.99e-11,95;UBERON:0006601,7.99e-11,95;UBERON:0003056,2.59e-10,49;UBERON:0002021,1.65e-09,10;UBERON:0000411,1.65e-09,10;UBERON:0001950,1.65e-09,10;UBERON:0002619,4.05e-09,17;UBERON:0000956,1.17e-07,21;UBERON:0001869,1.17e-07,21;UBERON:0000203,1.17e-07,21;UBERON:0002420,8.13e-07,8;UBERON:0007245,8.13e-07,8;UBERON:0010009,8.13e-07,8;UBERON:0010011,8.13e-07,8;UBERON:0000454,8.13e-07,8
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|phase1_expression=0.640595388419176,0.697950815278722,1.36499771816861,1.20985684522732,0,0.16787927191189,0.467225281191051,0.774739940649458,0.281577444303333,0,0.34243593645101,0,1.19840510951844,0.437102012094987,1.66554880907831,0.404950534779652,0,3.3123527362615,2.19383093769182,1.27316895539409,2.55129870453209,0.198581902401771,0.261199789138935,0.159992422793407,0.22940928106717,0,0.430761996159075,0.215471232685889,1.14014051673824,1.51218077855958,0.221730510655305,0,0,0,0,0,0,17.996860121687,10.9386948233332,5.75876118371178,16.4704816648684,19.8083190637949,13.1087795318411,0.125896817975577,0,0,0,0,1.75748946187577,0.58328969722285,0.419959264876088,0,2.01339127269284,2.17608642603403,2.35265659399725,0.257259436035947,0,0.515672092277442,5.46254444320914,7.93486468908049,6.33831403506179,0.338844532069132,0,3.5995988691256,0.988866362566974,2.1314403448383,0.898800331555214,0,0.518448061542388,0.675029691658453,0.841299845405528,8.85518051651791,10.8225585066291,1.46988959057945,1.34183659425531,0.919218786610021,8.8092704799511,11.1087984134113,9.21639199537461,5.93488294785872,6.49562269577109,5.73004707612436,6.97957497503452,7.31591393041184,9.62628960993904,13.5529149317887,14.8066548031067,8.20157561631323,0.302904773332736,0.453429360640713,0.579728977403356,0,0,0,0,0.448026887097336,0.983110940922263,0,0.519572009205738,0,0.281686839553361,1.28326477414318,2.54805239706646,7.11066703153331,0,0.253359865475099,0,1.37020655662872,2.07150306917737,0.593768556259299,0,0.608930956624282,0.691846491768175,0.301445281105245,0.940709657085638,0.502666365318702,0,0.289198713839823,7.07688441559899,0.808834249737046,0.441683036920787,1.45462575940567,1.86391761218122,11.4184510834503,15.7085030110091,2.55457055208591,0.11981512450592,0,0.127070227073065,10.9347166765521,17.8425235099264,17.2146462394624,16.8609590586508,12.5300574091862,10.5971902725376,10.8701646255398,1.42575109390443,1.99051152976149,1.76905930903572,3.36706969418358,0.390361328888111,0,0.540186389416048,0.30140963567143,0.884474488967262,0.640568601424249,1.68663104207512,3.62184719034622,0.215567992932842,0.189106080167819,0.351902248327898,0.657587197282725,0.834141747676794,0.348252166522167,0.205782136407943,0.398068533636986,0,0.772043721344145,0.568326998791185,0,0,0.180062061461015,0,0,0,0,0.268273401399619,0.233530684734339,0,0,0.405344047729279,0.584799949701329,0,0.268412837520744,13.0379768109759,9.36431972651488,0.660837565967596,0,0,0,0.38660238396628,0.201683524623343,0.22237804384487,0,0.474529061544512,1.15289268306808,0.502670417600539,0.994782360205754,0.58489226135736,0.898819408654221,1.29682829924817,1.7922714592893,0.379335801906163,0.228497025219458,0,0.203651327845314,0.193952487167626,0.350679099451593,0.948548056863859,0.590440591918409,0.470996183524124,1.60416313098341,0.592905254174298,0,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0.486405680325106,0.549122826376163,0,0.744281895337007,0,0.505157755894224,0.358794827043824,0,2.03228509183265,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0.975668239288994,0.788175720530955,1.7717175171902,0.797273843287435,0.983179888294428,0.518054945597687,1.73578870297814,1.50791283939272,3.26343410291226,0.491764273019036,0.551873492609465,8.18808008937739,7.3843362553088,0.163934945376675,0,0.631016438832513,0.390438744296638,0.430846795465598,0.477937595905104,0,0,0,0.584511715822624,1.18586333383957,16.0660658210904,0.283880170416537,0.178065603667255,1.46598263418218,0.329940245945071,0,0,0,0.188605079755898,0,0.307435147943927,0.775284879504663,0.363533729477506,0.356497378384721,0.316036757935816,0,0,3.06395645178409,0.18006109403131,0.129358683782755,0.428674070063185,0.532020700926821,1.07021290561242,0.987294123612726,1.522324745573,1.17335854031855,0.847328283455281,0.882113592219848,1.97863503529776,1.77610869365496,0.422190474497091,0.238744688006273,0.328281799490123,0.291480836629851,12.4234952347041,1.53783792718067,1.44470807574256,1.29636169158798,0.565105371014073,0.956859594047176,0.686334519619568,0.339956859987711,0.419854356970974,0.414599921413271,0.954670618015114,0,0.203319467126849,0.108005340821801,0.627264888043406,1.09181281873089,0.539457385539283,1.07449492442937,0.523511883968059,1.42576470620972,0.621339313086926,1.12738587736838,0.598066184175915,0.66183396182839,0.972255941720238,0.904118764344118,1.85851738039856,1.76035857968631,0.911430693907651,1.25831213310853,2.17425708743405,1.44015003128933,0,0,0.205421914329655,0,0.358053391334963,0.596044064343795,0.600977247599844,0.443068581523732,0.302899349844443,0.304827226619999,0.403304740547362,0.974578807397524,0.481059208201647,0.584384510907845,0.906921534460845,0,0,0.167884616364078,1.35232715822533,2.43987218086537,0.183151624267265,0.428736758158132,1.50471631210609,14.6835479080437,11.0478056761722,13.1765968091061,8.59265911718438,10.9613203163303,12.8416962556249,13.5004500046361,20.2644541450899,14.9536994964788,15.5328093525546,0,0,0,0.486213434136588,1.46729213839588,2.94149613520023,1.77797382241292,1.44224540067226,1.92551525755089,2.27427490587418,2.28131369901216,1.88626341386076,1.591905626988,1.79270426733634,2.35485422718014,0.952587382566147,1.50649623728312,1.54327376370964,0.824171801606613,0.883193520806384,2.74295401908332,1.24233064311536,0.715308569841963,2.18019624948493,1.50575008664529,1.60767754994185,2.56099162021882,1.57841826862706,0.679020569229309,1.12228454331548,0.593175090620871,1.77308068276014,0.818462086339379,0.619747364743864,0.964533054905707,3.2475375131933,0.935726433781634,3.65280791882107,2.48674831689496,0.661774257358546,1.62307484934295
|short_description=p@chr1:59970327..59970380,+
|short_description=p@chr1:59970327..59970380,+
}}
}}

Latest revision as of 19:53, 5 August 2015

Short description:p@chr1:59970327..59970380, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr1:59970327..59970380, +
Coexpression cluster:MCL_coexpression_mm9:663
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr1:59970327..59970380+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G818.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G916.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H219.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H413.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.82
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.93
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.50
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.55
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.20
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B211.42
cerebellum, neonate N30.CNhs11135.1395-42I215.71
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A410.93
corpus striatum, adult.CNhs10487.19-21D817.84
corpus striatum, neonate N00.CNhs11226.630-43F117.21
cortex, adult.CNhs10473.12-14D516.86
cortex, neonate N30.CNhs11107.1392-42F212.53
diencephalon, adult.CNhs10482.20-12F210.60
diencephalon, neonate N30.CNhs11201.1388-42B210.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E813.04
hippocampus, neonate N00.CNhs11228.627-43G19.36
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.95
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C28.19
medulla oblongata, neonate N30.CNhs11200.1396-42A37.38
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I916.07
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C912.42
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.68
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.59
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.95
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.53
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.02e-0923
neuroblast (sensu Vertebrata)4.02e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.79e-1954
neural tube8.44e-1852
neural rod8.44e-1852
future spinal cord8.44e-1852
neural keel8.44e-1852
gray matter2.15e-1634
central nervous system2.79e-1573
nervous system2.22e-1475
brain2.36e-1447
future brain2.36e-1447
neurectoderm3.96e-1464
neural plate3.96e-1464
presumptive neural plate3.96e-1464
regional part of brain1.38e-1346
brain grey matter9.56e-1329
regional part of telencephalon9.56e-1329
telencephalon9.56e-1329
anterior neural tube3.83e-1240
ecto-epithelium8.01e-1273
regional part of forebrain1.70e-1139
forebrain1.70e-1139
future forebrain1.70e-1139
ectoderm-derived structure7.99e-1195
ectoderm7.99e-1195
presumptive ectoderm7.99e-1195
pre-chordal neural plate2.59e-1049
occipital lobe1.65e-0910
visual cortex1.65e-0910
neocortex1.65e-0910
regional part of cerebral cortex4.05e-0917
cerebral cortex1.17e-0721
cerebral hemisphere1.17e-0721
pallium1.17e-0721
basal ganglion8.13e-078
nuclear complex of neuraxis8.13e-078
aggregate regional part of brain8.13e-078
collection of basal ganglia8.13e-078
cerebral subcortex8.13e-078
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