FFCP PHASE1:Mm9::chr1:57028556..57028583,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=212712 | |EntrezGene=212712 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8VI24 | |UniProt=Q8VI24 | ||
|association_with_transcript=118bp_to_ENSMUST00000114415_5end | |association_with_transcript=118bp_to_ENSMUST00000114415_5end | ||
|cluster_id=chr1:57028556..57028583,- | |||
|description=CAGE_peak_5_at_Satb2_5end | |description=CAGE_peak_5_at_Satb2_5end | ||
|id=chr1:57028556..57028583,- | |id=chr1:57028556..57028583,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.70e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!3.38e-12!21;UBERON:0001869!3.38e-12!21;UBERON:0000203!3.38e-12!21;UBERON:0002021!4.43e-09!10;UBERON:0000411!4.43e-09!10;UBERON:0001950!4.43e-09!10;UBERON:0002619!4.82e-09!17;UBERON:0002791!3.21e-08!29;UBERON:0003528!3.21e-08!29;UBERON:0001893!3.21e-08!29;UBERON:0003080!2.71e-07!40;UBERON:0002780!2.98e-07!39;UBERON:0001890!2.98e-07!39;UBERON:0006240!2.98e-07!39;UBERON:0002020!6.18e-07!34 | |ontology_enrichment_uberon=UBERON:0000956!3.38e-12!21;UBERON:0001869!3.38e-12!21;UBERON:0000203!3.38e-12!21;UBERON:0002021!4.43e-09!10;UBERON:0000411!4.43e-09!10;UBERON:0001950!4.43e-09!10;UBERON:0002619!4.82e-09!17;UBERON:0002791!3.21e-08!29;UBERON:0003528!3.21e-08!29;UBERON:0001893!3.21e-08!29;UBERON:0003080!2.71e-07!40;UBERON:0002780!2.98e-07!39;UBERON:0001890!2.98e-07!39;UBERON:0006240!2.98e-07!39;UBERON:0002020!6.18e-07!34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.36e-19,21;UBERON:0001869,2.36e-19,21;UBERON:0000203,2.36e-19,21;UBERON:0002619,2.84e-14,17;UBERON:0003528,1.55e-13,29;UBERON:0002791,1.55e-13,29;UBERON:0001893,1.55e-13,29;UBERON:0002021,1.58e-13,10;UBERON:0000411,1.58e-13,10;UBERON:0001950,1.58e-13,10;UBERON:0002020,1.19e-10,34;UBERON:0002780,1.53e-08,39;UBERON:0001890,1.53e-08,39;UBERON:0006240,1.53e-08,39;UBERON:0003080,3.45e-08,40 | |||
|phase1_expression=0,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0.57423196411502,0,0.215471232685889,0.760093677825496,0.756090389279792,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0.917733760808408,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0,0,0,5.18448061542388,7.02030879324791,4.83747411108179,0.285650984403804,0.220868540951614,2.20483438586917,1.62937300731002,1.83843757322004,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,1.06016670666458,0.302286240427142,0,0,0.679971333707751,0,0,0,0.421333260395256,3.57903677413921,1.81850203222008,1.7666978725517,0,0,20.3844191765317,14.2213340630666,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,4.04417124868523,5.07935492458905,11.6370060752453,3.72783522436244,0,0,0,0,0,0,0.149790639404823,0.457500602818626,1.00523481690292,6.08385120672968,2.81287003063364,0.20778804455956,0.162241263067758,0,3.98102305952298,0,0,0.390361328888111,0,0,0.30140963567143,0.0680364991513279,0.384341160854549,0.187403449119458,0,0,0,0.351902248327898,0.43839146485515,0.834141747676794,2.089512999133,1.4404749548556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,1.02904612379284,0,0.264450566663544,0.213288250535234,0,0.515469845288373,0.605050573870028,0,1.33157938278791,0,0,0.251335208800269,0.198956472041151,0,0.898819408654221,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0.147610147979602,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47541450839008,0.504941854408746,0,0,0.215423397732799,0.238968797952552,0.222798674082394,1.13230612315533,0.404810701674894,0,0.395287777946524,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.709360934569094,0.356737635204141,0.493647061806363,0,0.23467170806371,0.21183207086382,0,1.81374878235628,0.322928853391811,0.72375509913787,0.358117032009409,0.328281799490123,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,3.24037433229482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0.887943813496259,2.24284641523689,1.17519231454855,0,0,0,0,0,4.51801474093653,8.74617949363636,5.72895513439397,6.35856774671644,2.74033007908257,6.0431511791176,2.70009000092722,4.05289082901798,4.53142408984205,6.21312374102184,0.93408612825759,0.798049746802062,0.853668028770671,0.486213434136588,1.25767897576789,3.12533964365024,3.33370091702423,2.06035057238894,1.60459604795908,2.52697211763797,2.78827229879264,2.64076877940507,3.183811253976,2.62503124859964,3.50356360629241,4.28664322154766,2.66533949673168,2.31491064556446,3.70877310722976,2.64958056241915,4.4573002810104,3.19456451086807,1.1921809497366,3.19762116591123,1.59985946706062,2.36920902096694,2.92684756596436,3.15683653725411,3.12349461845482,1.12228454331548,2.49133538060766,2.06859412988683,1.22769312950907,2.16911577660352,3.08650577569826,4.24677982494508,1.16965804222704,1.50409737833809,1.53030665655075,1.98532277207564,2.08681052058379 | |phase1_expression=0,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0.57423196411502,0,0.215471232685889,0.760093677825496,0.756090389279792,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0.917733760808408,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0.899899717281399,0.988866362566974,0,0,0,5.18448061542388,7.02030879324791,4.83747411108179,0.285650984403804,0.220868540951614,2.20483438586917,1.62937300731002,1.83843757322004,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,1.06016670666458,0.302286240427142,0,0,0.679971333707751,0,0,0,0.421333260395256,3.57903677413921,1.81850203222008,1.7666978725517,0,0,20.3844191765317,14.2213340630666,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,4.04417124868523,5.07935492458905,11.6370060752453,3.72783522436244,0,0,0,0,0,0,0.149790639404823,0.457500602818626,1.00523481690292,6.08385120672968,2.81287003063364,0.20778804455956,0.162241263067758,0,3.98102305952298,0,0,0.390361328888111,0,0,0.30140963567143,0.0680364991513279,0.384341160854549,0.187403449119458,0,0,0,0.351902248327898,0.43839146485515,0.834141747676794,2.089512999133,1.4404749548556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,1.02904612379284,0,0.264450566663544,0.213288250535234,0,0.515469845288373,0.605050573870028,0,1.33157938278791,0,0,0.251335208800269,0.198956472041151,0,0.898819408654221,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0.147610147979602,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47541450839008,0.504941854408746,0,0,0.215423397732799,0.238968797952552,0.222798674082394,1.13230612315533,0.404810701674894,0,0.395287777946524,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.709360934569094,0.356737635204141,0.493647061806363,0,0.23467170806371,0.21183207086382,0,1.81374878235628,0.322928853391811,0.72375509913787,0.358117032009409,0.328281799490123,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,3.24037433229482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0.887943813496259,2.24284641523689,1.17519231454855,0,0,0,0,0,4.51801474093653,8.74617949363636,5.72895513439397,6.35856774671644,2.74033007908257,6.0431511791176,2.70009000092722,4.05289082901798,4.53142408984205,6.21312374102184,0.93408612825759,0.798049746802062,0.853668028770671,0.486213434136588,1.25767897576789,3.12533964365024,3.33370091702423,2.06035057238894,1.60459604795908,2.52697211763797,2.78827229879264,2.64076877940507,3.183811253976,2.62503124859964,3.50356360629241,4.28664322154766,2.66533949673168,2.31491064556446,3.70877310722976,2.64958056241915,4.4573002810104,3.19456451086807,1.1921809497366,3.19762116591123,1.59985946706062,2.36920902096694,2.92684756596436,3.15683653725411,3.12349461845482,1.12228454331548,2.49133538060766,2.06859412988683,1.22769312950907,2.16911577660352,3.08650577569826,4.24677982494508,1.16965804222704,1.50409737833809,1.53030665655075,1.98532277207564,2.08681052058379 | ||
|short_description=p5@Satb2 | |short_description=p5@Satb2 | ||
}} | }} |
Latest revision as of 05:51, 27 September 2015
Short description: | p5@Satb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Satb2_5end |
Coexpression cluster: | NA |
Association with transcript: | 118bp_to_ENSMUST00000114415_5end |
EntrezGene: | Satb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.70e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 2.36e-19 | 21 |
cerebral hemisphere | 2.36e-19 | 21 |
pallium | 2.36e-19 | 21 |
regional part of cerebral cortex | 2.84e-14 | 17 |
brain grey matter | 1.55e-13 | 29 |
regional part of telencephalon | 1.55e-13 | 29 |
telencephalon | 1.55e-13 | 29 |
occipital lobe | 1.58e-13 | 10 |
visual cortex | 1.58e-13 | 10 |
neocortex | 1.58e-13 | 10 |
gray matter | 1.19e-10 | 34 |
regional part of forebrain | 1.53e-08 | 39 |
forebrain | 1.53e-08 | 39 |
future forebrain | 1.53e-08 | 39 |
anterior neural tube | 3.45e-08 | 40 |