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FFCP PHASE1:Mm9::chr9:120213083..120213139,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=245049
|EntrezGene=245049
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8K3I4
|UniProt=Q8K3I4
|association_with_transcript=29bp_to_ENSMUST00000048121_5end
|association_with_transcript=29bp_to_ENSMUST00000048121_5end
|cluster_id=chr9:120213083..120213139,+
|description=CAGE_peak_1_at_Myrip_5end
|description=CAGE_peak_1_at_Myrip_5end
|id=chr9:120213083..120213139,+
|id=chr9:120213083..120213139,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,8.34e-08,23;CL:0000337,8.34e-08,23;CL:0000540,5.61e-07,33;CL:0000047,5.61e-07,33;CL:0000031,5.61e-07,33;CL:0000404,5.61e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.18e-15!102;UBERON:0000924!1.18e-15!102;UBERON:0006601!1.18e-15!102;UBERON:0001017!5.94e-15!73;UBERON:0005743!5.94e-15!73;UBERON:0000073!1.41e-14!75;UBERON:0001016!1.41e-14!75;UBERON:0002346!6.65e-14!71;UBERON:0003075!6.65e-14!71;UBERON:0007284!6.65e-14!71;UBERON:0000033!1.21e-12!63;UBERON:0001049!3.17e-12!52;UBERON:0005068!3.17e-12!52;UBERON:0006241!3.17e-12!52;UBERON:0007135!3.17e-12!52;UBERON:0000955!4.70e-11!50;UBERON:0006238!4.70e-11!50;UBERON:0002616!1.19e-10!49;UBERON:0003056!1.38e-09!49;UBERON:0007023!4.66e-09!51;UBERON:0002020!3.15e-08!34;UBERON:0002021!4.82e-08!10;UBERON:0000411!4.82e-08!10;UBERON:0001950!4.82e-08!10;UBERON:0003080!6.64e-08!40;UBERON:0002780!1.94e-07!39;UBERON:0001890!1.94e-07!39;UBERON:0006240!1.94e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.67e-18,64;UBERON:0003075,2.67e-18,64;UBERON:0007284,2.67e-18,64;UBERON:0000073,2.96e-18,54;UBERON:0001017,4.95e-18,73;UBERON:0001016,4.06e-17,75;UBERON:0004121,4.84e-17,95;UBERON:0000924,4.84e-17,95;UBERON:0006601,4.84e-17,95;UBERON:0001049,9.60e-17,52;UBERON:0005068,9.60e-17,52;UBERON:0006241,9.60e-17,52;UBERON:0007135,9.60e-17,52;UBERON:0010371,6.04e-15,73;UBERON:0002020,1.47e-13,34;UBERON:0000955,7.95e-13,47;UBERON:0006238,7.95e-13,47;UBERON:0003056,1.57e-12,49;UBERON:0002616,2.95e-12,46;UBERON:0002021,2.25e-11,10;UBERON:0000411,2.25e-11,10;UBERON:0001950,2.25e-11,10;UBERON:0010314,1.07e-10,92;UBERON:0003080,1.54e-10,40;UBERON:0002780,7.46e-10,39;UBERON:0001890,7.46e-10,39;UBERON:0006240,7.46e-10,39;UBERON:0003528,8.36e-10,29;UBERON:0002791,8.36e-10,29;UBERON:0001893,8.36e-10,29;UBERON:0007023,3.66e-09,51;UBERON:0011216,7.29e-08,194;UBERON:0003076,1.43e-07,12;UBERON:0003057,1.43e-07,12;UBERON:0002619,1.51e-07,17;UBERON:0004111,3.77e-07,122;UBERON:0000025,5.40e-07,114
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,3.18970616632591,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,0.95995453676044,0.68822784320151,0,1.7230479846363,0.861884930743556,3.04037471130198,3.2763916868791,3.10422714917427,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0.286533439938757,0,2.02316460859598,1.05798195854407,1.26766280701236,0,0,0,0,0,0.898800331555214,0.768436610643109,0,0,0,11.7116903605559,8.39300455616131,0.244981598429908,0.0958454710182364,0,6.60695285996332,7.66124028511126,8.60196586234964,1.58263545276233,1.37231465403614,1.56274011167028,8.37548997004143,6.75315132038016,6.57032465440283,7.95497180778903,8.11518580554887,4.10078780815661,0.302904773332736,0.226714680320357,13.0439019915755,1.72084775396277,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0.593768556259299,0.173485326766136,0.913396434936424,0.461230994512117,0.60289056221049,1.52865319276416,0,0.494389935468748,5.35017620603673,0,0.647067399789637,0.883366073841574,0,1.86391761218122,6.73395833126558,4.39838084308256,4.59822699375465,0,0,0,8.08869452786043,5.03250663100489,0.502617408451458,8.51739168942155,11.7629110371952,7.48036960414416,6.16516799657479,0.203678727700633,0.373220911830279,0.505445516867349,12.2056276414155,0.260240885925407,0,1.44049703844279,0.90422890701429,2.85753296435577,1.66547836370305,1.96773621575431,12.1590584247337,0,0.189106080167819,0.703804496655795,0.219195732427575,0.278047249225598,0,0.205782136407943,0.796137067273973,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.462801338662135,0,0,0.467061369468678,0.658239399653922,0.820837320395476,1.13496333364198,1.46199987425332,0.439100230582101,1.20785776884335,8.20130799400096,1.44066457330998,0.330418782983798,0.528901133327089,0.426576501070468,1.39342003116263,0.644337306610467,0.403367049246685,0.22237804384487,1.14135375667535,0.949058123089023,0.988193728344065,2.5133520880027,1.39269530428806,1.55971269695296,2.69645822596266,0.648414149624083,1.39398891278057,0,0.228497025219458,0,0.407302655690628,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0.156998727841375,0.616985819609003,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0,0,0,5.72734889516475,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,1.19021820443007,1.56106918286239,0.315270288212382,0.44292937929755,0.637819074629948,1.96635977658886,1.03610989119537,6.94315481191256,0,0,0.491764273019036,0.551873492609465,8.0275294993896,9.02529986759964,0,1.76729649043061,0.315508219416257,1.56175497718655,0.861693590931196,0.477937595905104,0.222798674082394,0.566153061577665,4.85772842009873,2.04579100537918,2.76701444562566,2.89189184779626,1.13552068166615,0,0.81443479676788,2.14461159864296,14.6019652173959,0.485561272309963,0,0,1.18120757152309,0,0.516856586336442,0.727067458955011,1.42598951353889,7.26884543252377,7.37930260024991,12.3762651897824,6.46835250932197,0.720244376125241,0.129358683782755,0.428674070063185,0.532020700926821,1.24858172321449,0.987294123612726,1.2178597964584,0,0.21183207086382,0.220528398054962,1.15420377059036,0.322928853391811,0.120625849856312,0.119372344003136,0,1.45740418314925,8.52956389248344,0,0,0,0,0.136694227721025,0,0.169978429993855,0,0,1.90934123603023,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0.909188012978695,2.35580347785627,1.55537967950151,12.4267862617385,0,0.299033092087958,0.330916980914195,0.388902376688095,0.516639293910924,0.844780627453891,0.117357238645754,0.2604087696879,0.419437377702843,0,0,0.316011120628178,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,1.9318959403219,0,2.56412273974171,1.07184189539533,0.501572104035363,16.3778034358949,14.2700823317225,17.1868654031819,17.5290245990561,12.3314853558716,9.06472676867641,4.72515750162264,9.45674526770863,10.8754178156209,13.4617681055473,0.103787347584177,0,0.170733605754134,0.243106717068294,0.419226325255965,0.551530525350042,0.44449345560323,0.412070114477788,0.320919209591815,0.758091635291392,0.25347929989024,0.754505365544305,0.37456602987953,0.640251524048693,0.631790158511746,1.90517476513229,0.347652977834566,0.38581844092741,0.412085900803307,0.147198920134397,1.02860775715625,0.532427418478012,0.953744759789284,0.436039249896986,0.658765662907314,0.169229215783353,1.09756783723664,0.263069711437843,0.950628796921032,0.561142271657738,0.949080144993393,0.591026894253381,0.818462086339379,0.619747364743864,0.578719832943424,0.499621155875892,0.233931608445408,1.07435527024149,1.14772999241306,1.10295709559758,1.85494268496337
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,3.18970616632591,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,0.95995453676044,0.68822784320151,0,1.7230479846363,0.861884930743556,3.04037471130198,3.2763916868791,3.10422714917427,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0.286533439938757,0,2.02316460859598,1.05798195854407,1.26766280701236,0,0,0,0,0,0.898800331555214,0.768436610643109,0,0,0,11.7116903605559,8.39300455616131,0.244981598429908,0.0958454710182364,0,6.60695285996332,7.66124028511126,8.60196586234964,1.58263545276233,1.37231465403614,1.56274011167028,8.37548997004143,6.75315132038016,6.57032465440283,7.95497180778903,8.11518580554887,4.10078780815661,0.302904773332736,0.226714680320357,13.0439019915755,1.72084775396277,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0.593768556259299,0.173485326766136,0.913396434936424,0.461230994512117,0.60289056221049,1.52865319276416,0,0.494389935468748,5.35017620603673,0,0.647067399789637,0.883366073841574,0,1.86391761218122,6.73395833126558,4.39838084308256,4.59822699375465,0,0,0,8.08869452786043,5.03250663100489,0.502617408451458,8.51739168942155,11.7629110371952,7.48036960414416,6.16516799657479,0.203678727700633,0.373220911830279,0.505445516867349,12.2056276414155,0.260240885925407,0,1.44049703844279,0.90422890701429,2.85753296435577,1.66547836370305,1.96773621575431,12.1590584247337,0,0.189106080167819,0.703804496655795,0.219195732427575,0.278047249225598,0,0.205782136407943,0.796137067273973,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.462801338662135,0,0,0.467061369468678,0.658239399653922,0.820837320395476,1.13496333364198,1.46199987425332,0.439100230582101,1.20785776884335,8.20130799400096,1.44066457330998,0.330418782983798,0.528901133327089,0.426576501070468,1.39342003116263,0.644337306610467,0.403367049246685,0.22237804384487,1.14135375667535,0.949058123089023,0.988193728344065,2.5133520880027,1.39269530428806,1.55971269695296,2.69645822596266,0.648414149624083,1.39398891278057,0,0.228497025219458,0,0.407302655690628,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0.156998727841375,0.616985819609003,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0,0,0,5.72734889516475,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,1.19021820443007,1.56106918286239,0.315270288212382,0.44292937929755,0.637819074629948,1.96635977658886,1.03610989119537,6.94315481191256,0,0,0.491764273019036,0.551873492609465,8.0275294993896,9.02529986759964,0,1.76729649043061,0.315508219416257,1.56175497718655,0.861693590931196,0.477937595905104,0.222798674082394,0.566153061577665,4.85772842009873,2.04579100537918,2.76701444562566,2.89189184779626,1.13552068166615,0,0.81443479676788,2.14461159864296,14.6019652173959,0.485561272309963,0,0,1.18120757152309,0,0.516856586336442,0.727067458955011,1.42598951353889,7.26884543252377,7.37930260024991,12.3762651897824,6.46835250932197,0.720244376125241,0.129358683782755,0.428674070063185,0.532020700926821,1.24858172321449,0.987294123612726,1.2178597964584,0,0.21183207086382,0.220528398054962,1.15420377059036,0.322928853391811,0.120625849856312,0.119372344003136,0,1.45740418314925,8.52956389248344,0,0,0,0,0.136694227721025,0,0.169978429993855,0,0,1.90934123603023,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0.909188012978695,2.35580347785627,1.55537967950151,12.4267862617385,0,0.299033092087958,0.330916980914195,0.388902376688095,0.516639293910924,0.844780627453891,0.117357238645754,0.2604087696879,0.419437377702843,0,0,0.316011120628178,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,1.9318959403219,0,2.56412273974171,1.07184189539533,0.501572104035363,16.3778034358949,14.2700823317225,17.1868654031819,17.5290245990561,12.3314853558716,9.06472676867641,4.72515750162264,9.45674526770863,10.8754178156209,13.4617681055473,0.103787347584177,0,0.170733605754134,0.243106717068294,0.419226325255965,0.551530525350042,0.44449345560323,0.412070114477788,0.320919209591815,0.758091635291392,0.25347929989024,0.754505365544305,0.37456602987953,0.640251524048693,0.631790158511746,1.90517476513229,0.347652977834566,0.38581844092741,0.412085900803307,0.147198920134397,1.02860775715625,0.532427418478012,0.953744759789284,0.436039249896986,0.658765662907314,0.169229215783353,1.09756783723664,0.263069711437843,0.950628796921032,0.561142271657738,0.949080144993393,0.591026894253381,0.818462086339379,0.619747364743864,0.578719832943424,0.499621155875892,0.233931608445408,1.07435527024149,1.14772999241306,1.10295709559758,1.85494268496337
|short_description=p1@Myrip
|short_description=p1@Myrip
}}
}}

Latest revision as of 08:10, 26 September 2015

Short description:p1@Myrip
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Myrip_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 29bp_to_ENSMUST00000048121_5end
EntrezGene:Myrip
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Myrip

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.10
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.04
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H15.35
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I24.40
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.09
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D58.52
cortex, neonate N30.CNhs11107.1392-42F211.76
diencephalon, adult.CNhs10482.20-12F27.48
diencephalon, neonate N30.CNhs11201.1388-42B26.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G412.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C62.86
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A212.16
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E88.20
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B15.73
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H26.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C28.03
medulla oblongata, neonate N30.CNhs11200.1396-42A39.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E414.60
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B67.27
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C98.53
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C112.43
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.19
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.34e-0823
neuroblast (sensu Vertebrata)8.34e-0823
neuron5.61e-0733
neuronal stem cell5.61e-0733
neuroblast5.61e-0733
electrically signaling cell5.61e-0733

Uber anatomy
Ontology termp-valuen
neurectoderm2.67e-1864
neural plate2.67e-1864
presumptive neural plate2.67e-1864
regional part of nervous system2.96e-1854
central nervous system4.95e-1873
nervous system4.06e-1775
ectoderm-derived structure4.84e-1795
ectoderm4.84e-1795
presumptive ectoderm4.84e-1795
neural tube9.60e-1752
neural rod9.60e-1752
future spinal cord9.60e-1752
neural keel9.60e-1752
ecto-epithelium6.04e-1573
gray matter1.47e-1334
brain7.95e-1347
future brain7.95e-1347
pre-chordal neural plate1.57e-1249
regional part of brain2.95e-1246
occipital lobe2.25e-1110
visual cortex2.25e-1110
neocortex2.25e-1110
structure with developmental contribution from neural crest1.07e-1092
anterior neural tube1.54e-1040
regional part of forebrain7.46e-1039
forebrain7.46e-1039
future forebrain7.46e-1039
brain grey matter8.36e-1029
regional part of telencephalon8.36e-1029
telencephalon8.36e-1029
adult organism3.66e-0951
organ system subdivision7.29e-08194
posterior neural tube1.43e-0712
chordal neural plate1.43e-0712
regional part of cerebral cortex1.51e-0717
anatomical conduit3.77e-07122
tube5.40e-07114
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