FFCP PHASE1:Mm9::chr1:20880643..20880668,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74229 | |EntrezGene=74229 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q80ZE5 | |UniProt=Q80ZE5 | ||
|association_with_transcript=-22bp_to_ENSMUST00000163700_5end | |association_with_transcript=-22bp_to_ENSMUST00000163700_5end | ||
|cluster_id=chr1:20880643..20880668,+ | |||
|description=CAGE_peak_2_at_Paqr8_5end | |description=CAGE_peak_2_at_Paqr8_5end | ||
|id=chr1:20880643..20880668,+ | |id=chr1:20880643..20880668,+ | ||
|ontology_enrichment_celltype=CL:0000221!1.83e-16!44;CL:0000133!1.83e-16!44;CL:0002319!3.71e-16!43;CL:0000055!5.01e-15!50;CL:0000540!1.68e-13!33;CL:0000047!1.68e-13!33;CL:0000031!1.68e-13!33;CL:0000404!1.68e-13!33;CL:0000393!8.18e-13!39;CL:0000211!8.18e-13!39;CL:0000117!9.11e-11!23;CL:0000337!9.11e-11!23;CL:0002321!1.31e-09!70;CL:0000220!1.31e-09!70 | |ontology_enrichment_celltype=CL:0000221!1.83e-16!44;CL:0000133!1.83e-16!44;CL:0002319!3.71e-16!43;CL:0000055!5.01e-15!50;CL:0000540!1.68e-13!33;CL:0000047!1.68e-13!33;CL:0000031!1.68e-13!33;CL:0000404!1.68e-13!33;CL:0000393!8.18e-13!39;CL:0000211!8.18e-13!39;CL:0000117!9.11e-11!23;CL:0000337!9.11e-11!23;CL:0002321!1.31e-09!70;CL:0000220!1.31e-09!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.84e-16,44;CL:0000133,1.84e-16,44;CL:0002319,3.76e-16,43;CL:0000540,1.32e-13,33;CL:0000047,1.32e-13,33;CL:0000031,1.32e-13,33;CL:0000404,1.32e-13,33;CL:0000393,6.52e-13,39;CL:0000211,6.52e-13,39;CL:0000117,7.57e-11,23;CL:0000337,7.57e-11,23;CL:0002321,6.22e-10,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.81e-31!75;UBERON:0001016!5.81e-31!75;UBERON:0001017!6.00e-31!73;UBERON:0005743!6.00e-31!73;UBERON:0004121!6.34e-29!102;UBERON:0000924!6.34e-29!102;UBERON:0006601!6.34e-29!102;UBERON:0002346!8.25e-22!71;UBERON:0003075!8.25e-22!71;UBERON:0007284!8.25e-22!71;UBERON:0001049!5.49e-21!52;UBERON:0005068!5.49e-21!52;UBERON:0006241!5.49e-21!52;UBERON:0007135!5.49e-21!52;UBERON:0000955!5.64e-20!50;UBERON:0006238!5.64e-20!50;UBERON:0002616!2.23e-19!49;UBERON:0002020!1.30e-16!34;UBERON:0000033!4.21e-16!63;UBERON:0003080!6.69e-15!40;UBERON:0002780!2.89e-14!39;UBERON:0001890!2.89e-14!39;UBERON:0006240!2.89e-14!39;UBERON:0002791!1.05e-13!29;UBERON:0003528!1.05e-13!29;UBERON:0001893!1.05e-13!29;UBERON:0003056!2.58e-12!49;UBERON:0000956!1.28e-09!21;UBERON:0001869!1.28e-09!21;UBERON:0000203!1.28e-09!21;UBERON:0002619!2.28e-08!17;UBERON:0007811!1.53e-07!86;UBERON:0000153!2.94e-07!94;UBERON:0003076!7.04e-07!12;UBERON:0003057!7.04e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!5.81e-31!75;UBERON:0001016!5.81e-31!75;UBERON:0001017!6.00e-31!73;UBERON:0005743!6.00e-31!73;UBERON:0004121!6.34e-29!102;UBERON:0000924!6.34e-29!102;UBERON:0006601!6.34e-29!102;UBERON:0002346!8.25e-22!71;UBERON:0003075!8.25e-22!71;UBERON:0007284!8.25e-22!71;UBERON:0001049!5.49e-21!52;UBERON:0005068!5.49e-21!52;UBERON:0006241!5.49e-21!52;UBERON:0007135!5.49e-21!52;UBERON:0000955!5.64e-20!50;UBERON:0006238!5.64e-20!50;UBERON:0002616!2.23e-19!49;UBERON:0002020!1.30e-16!34;UBERON:0000033!4.21e-16!63;UBERON:0003080!6.69e-15!40;UBERON:0002780!2.89e-14!39;UBERON:0001890!2.89e-14!39;UBERON:0006240!2.89e-14!39;UBERON:0002791!1.05e-13!29;UBERON:0003528!1.05e-13!29;UBERON:0001893!1.05e-13!29;UBERON:0003056!2.58e-12!49;UBERON:0000956!1.28e-09!21;UBERON:0001869!1.28e-09!21;UBERON:0000203!1.28e-09!21;UBERON:0002619!2.28e-08!17;UBERON:0007811!1.53e-07!86;UBERON:0000153!2.94e-07!94;UBERON:0003076!7.04e-07!12;UBERON:0003057!7.04e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.53e-31,75;UBERON:0001017,4.70e-31,73;UBERON:0004121,5.91e-26,95;UBERON:0000924,5.91e-26,95;UBERON:0006601,5.91e-26,95;UBERON:0000073,1.72e-22,54;UBERON:0001049,5.15e-21,52;UBERON:0005068,5.15e-21,52;UBERON:0006241,5.15e-21,52;UBERON:0007135,5.15e-21,52;UBERON:0002346,4.83e-19,64;UBERON:0003075,4.83e-19,64;UBERON:0007284,4.83e-19,64;UBERON:0010371,2.48e-18,73;UBERON:0000955,7.58e-18,47;UBERON:0006238,7.58e-18,47;UBERON:0002616,2.92e-17,46;UBERON:0002020,9.59e-17,34;UBERON:0010314,4.70e-15,92;UBERON:0003080,5.11e-15,40;UBERON:0002780,2.24e-14,39;UBERON:0001890,2.24e-14,39;UBERON:0006240,2.24e-14,39;UBERON:0003528,8.21e-14,29;UBERON:0002791,8.21e-14,29;UBERON:0001893,8.21e-14,29;UBERON:0003056,2.08e-12,49;UBERON:0000956,1.09e-09,21;UBERON:0001869,1.09e-09,21;UBERON:0000203,1.09e-09,21;UBERON:0002619,1.99e-08,17;UBERON:0003076,8.89e-07,12;UBERON:0003057,8.89e-07,12 | |||
|phase1_expression=3.52327463630547,0.697950815278722,1.36499771816861,0.30246421130683,0,1.34303417529512,1.16806320297763,2.32421982194837,0.281577444303333,0.234064526321993,0,0,4.79362043807376,2.27293046289393,1.66554880907831,0.404950534779652,0,2.68142840554502,1.09691546884591,0.84877930359606,8.67441559540912,2.28369187762036,0.783599367416806,3.67982572424835,4.81759490241057,1.72269589234506,0.430761996159075,1.07735616342945,0.760093677825496,0.252030129759931,1.99557459589774,0,0,0,1.1554064790051,0.498703936075477,1.22501613757421,0.837063261473815,0.7813353445238,0,0.588231488031014,0.683045484958446,0,3.27331726736501,2.02753862439029,2.75320128242522,0.782391344348039,33.5758740825888,22.1883044561817,26.6368961731768,22.9577731465595,25.8754615856949,0.335565212115473,0.725362142011344,2.01656279485478,3.08711323243136,5.73066879877513,8.76642556871652,13.3528864167335,8.46385566835253,12.6766280701236,3.72728985276045,7.11435836888911,0.449949858640699,0,0.7104801149461,12.8828047522914,14.9845139075406,7.67303131082735,8.50537411489651,7.78202357000113,34.5637691128602,44.8363138131775,3.30725157880376,3.64212789869298,8.27296907949019,60.5637345496638,52.6071832910973,56.3735977050414,16.2220133908138,16.742238779241,14.0646610050325,49.6945738222458,41.6444331423443,37.8939654486489,23.5702868378934,26.0540175862358,18.6399445825301,2.49896437999507,8.31287161174641,8.69593466105033,1.72084775396277,0,1.07940638327563,0,0,2.24711072210803,2.38602451609281,1.55871602761721,2.47337702157238,8.45060518660083,10.2661181931454,7.64415719119937,14.2213340630666,10.6080610095495,11.9079136773296,14.6602089054287,2.51204535381932,5.95557132388495,16.92240385339,4.68410382268567,7.61163695780353,10.1470818792666,14.1679282119465,12.8171690777918,21.2376539347152,3.21353458054686,1.44599356919912,1.76922110389975,2.42650274921114,1.76673214768315,0.969750506270444,11.1835056730873,47.1377083188591,56.131717426006,1.27728527604296,0.958520996047362,1.79970819298022,0.762421362438388,45.0869824608516,27.9075367719362,8.67015029578764,30.5930803538407,27.105838477015,45.0900056694245,33.0972176658226,2.24046600470696,1.36847667671102,0.505445516867349,7.57590681191306,2.08192708740326,2.29902104433473,2.88099407688559,1.9591626318643,2.04109497453984,1.92170580427275,1.59292931751539,4.13925393182425,2.58681591519411,2.26927296201383,2.99116911078713,2.84954452155847,2.22437799380478,2.78601733217733,2.46938563689532,1.99034266818493,0,0.257347907114715,0.284163499395593,3.52113813310353,0.938104239924385,1.80062061461015,1.89395788468168,1.37734962223183,1.23413690309903,1.39520366850245,1.3413670069981,0.817357396570186,1.48103864922132,1.80584210487005,1.70244500046297,1.75439984910399,1.3173006917463,1.8788898626452,35.3287113587734,18.4199256158919,2.97376904685418,1.58670339998127,1.91959425481711,3.0190767341857,3.73715637834071,3.83198696784351,3.11329261382818,1.90225626112559,0.474529061544512,3.95277491337626,4.02136334080431,3.38226002469956,3.70431765526328,1.79763881730844,1.51296634912286,2.78797782556114,2.46568271239006,1.94222471436539,1.1270773567308,1.62921062276251,2.13347735884388,2.45475369616115,1.83385957660346,1.32849133181642,0.31399745568275,1.35736880313981,0.592905254174298,0.83422552858047,0.982794975566015,0.224862112384854,0,0.482354319504834,0.25462585178142,0.863088412352432,0.324270453550071,0.823684239564244,0,1.11642284300551,0,0.252578877947112,0.358794827043824,0.482443521363367,8.31389355749721,2.84237117655727,2.93336957595647,2.20668611507745,2.34690248288502,3.51763140627813,3.57065461329021,4.29294025287157,5.51723004371669,5.75808193086815,8.13219320153184,6.39066927391378,7.7708241839653,7.5217510462386,1.50791283939272,1.63171705145613,0,0.275936746304732,46.7202216864475,55.2067043849277,0.819674726883377,0.757412781613119,7.2566890465739,10.5418460960092,7.75524231838076,8.12493913038677,12.6995244226965,20.3815102167959,9.71545684019746,9.05993159525067,11.4633455604492,26.0270266301664,6.81312408999689,3.02711526234334,3.74640006513225,8.08353602565424,0,0.971122544619926,0.906970670894253,1.13163047853539,0.295301892880773,2.45948118355142,2.32585463851399,2.18120237686503,1.06949213515416,0.632073515871632,0,0,7.48967132658334,4.32146625675145,2.97524972700335,4.07240366560025,4.78818630834139,2.49716344642899,5.10101963866575,2.74018454203139,2.58138878870081,1.90648863777438,1.98475558249466,6.26567761177624,3.22928853391811,5.30753739367772,5.96861720015682,7.55048138827282,2.04036585640896,59.1506713413526,1.36696704638282,1.65109494370578,0.740778109478847,0,0.683471138605126,1.83022538565218,2.20971958992012,2.93898049879682,1.93479963326193,14.3200592702267,4.4287039101359,5.89626454667861,4.32021363287205,7.73626695253534,8.07941485860857,8.4964538222437,9.4224939526883,13.3495530411855,10.1099679167598,0.621339313086926,0.56369293868419,3.28936401296753,3.80554528051325,2.52786544847262,2.45403664607689,3.71703476079712,3.16864544343536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| ||
|short_description=p2@Paqr8 | |short_description=p2@Paqr8 | ||
}} | }} |
Latest revision as of 00:59, 27 September 2015
Short description: | p2@Paqr8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Paqr8_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -22bp_to_ENSMUST00000163700_5end |
EntrezGene: | Paqr8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.84e-16 | 44 |
neurectodermal cell | 1.84e-16 | 44 |
neural cell | 3.76e-16 | 43 |
neuron | 1.32e-13 | 33 |
neuronal stem cell | 1.32e-13 | 33 |
neuroblast | 1.32e-13 | 33 |
electrically signaling cell | 1.32e-13 | 33 |
electrically responsive cell | 6.52e-13 | 39 |
electrically active cell | 6.52e-13 | 39 |
CNS neuron (sensu Vertebrata) | 7.57e-11 | 23 |
neuroblast (sensu Vertebrata) | 7.57e-11 | 23 |
embryonic cell | 6.22e-10 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.53e-31 | 75 |
central nervous system | 4.70e-31 | 73 |
ectoderm-derived structure | 5.91e-26 | 95 |
ectoderm | 5.91e-26 | 95 |
presumptive ectoderm | 5.91e-26 | 95 |
regional part of nervous system | 1.72e-22 | 54 |
neural tube | 5.15e-21 | 52 |
neural rod | 5.15e-21 | 52 |
future spinal cord | 5.15e-21 | 52 |
neural keel | 5.15e-21 | 52 |
neurectoderm | 4.83e-19 | 64 |
neural plate | 4.83e-19 | 64 |
presumptive neural plate | 4.83e-19 | 64 |
ecto-epithelium | 2.48e-18 | 73 |
brain | 7.58e-18 | 47 |
future brain | 7.58e-18 | 47 |
regional part of brain | 2.92e-17 | 46 |
gray matter | 9.59e-17 | 34 |
structure with developmental contribution from neural crest | 4.70e-15 | 92 |
anterior neural tube | 5.11e-15 | 40 |
regional part of forebrain | 2.24e-14 | 39 |
forebrain | 2.24e-14 | 39 |
future forebrain | 2.24e-14 | 39 |
brain grey matter | 8.21e-14 | 29 |
regional part of telencephalon | 8.21e-14 | 29 |
telencephalon | 8.21e-14 | 29 |
pre-chordal neural plate | 2.08e-12 | 49 |
cerebral cortex | 1.09e-09 | 21 |
cerebral hemisphere | 1.09e-09 | 21 |
pallium | 1.09e-09 | 21 |
regional part of cerebral cortex | 1.99e-08 | 17 |
posterior neural tube | 8.89e-07 | 12 |
chordal neural plate | 8.89e-07 | 12 |