Personal tools

FFCP PHASE1:Mm9::chr1:173957382..173957399,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=93840
|EntrezGene=93840
|HGNC=
|HGNC=
|MCL_coexpression_id=1425
|TSSclassifier=NA
|UniProt=D3Z374,Q91ZD4
|UniProt=D3Z374,Q91ZD4
|association_with_transcript=0bp_to_ENSMUST00000138714,NM_033509_5end
|association_with_transcript=0bp_to_ENSMUST00000138714,NM_033509_5end
|cluster_id=chr1:173957382..173957399,-
|description=CAGE_peak_2_at_Vangl2_5end
|description=CAGE_peak_2_at_Vangl2_5end
|id=chr1:173957382..173957399,-
|id=chr1:173957382..173957399,-
|ontology_enrichment_celltype=CL:0000221!4.38e-17!44;CL:0000133!4.38e-17!44;CL:0002319!1.94e-16!43;CL:0000540!6.28e-15!33;CL:0000047!6.28e-15!33;CL:0000031!6.28e-15!33;CL:0000404!6.28e-15!33;CL:0000055!7.97e-13!50;CL:0000393!6.51e-12!39;CL:0000211!6.51e-12!39;CL:0000117!1.16e-10!23;CL:0000337!1.16e-10!23
|ontology_enrichment_celltype=CL:0000221!4.38e-17!44;CL:0000133!4.38e-17!44;CL:0002319!1.94e-16!43;CL:0000540!6.28e-15!33;CL:0000047!6.28e-15!33;CL:0000031!6.28e-15!33;CL:0000404!6.28e-15!33;CL:0000055!7.97e-13!50;CL:0000393!6.51e-12!39;CL:0000211!6.51e-12!39;CL:0000117!1.16e-10!23;CL:0000337!1.16e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000221,3.66e-18,44;CL:0000133,3.66e-18,44;CL:0002319,1.85e-17,43;CL:0000540,3.64e-16,33;CL:0000047,3.64e-16,33;CL:0000031,3.64e-16,33;CL:0000404,3.64e-16,33;CL:0000393,8.68e-13,39;CL:0000211,8.68e-13,39;CL:0000117,1.67e-11,23;CL:0000337,1.67e-11,23;CL:0002321,9.71e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.91e-14!102;UBERON:0000924!1.91e-14!102;UBERON:0006601!1.91e-14!102;UBERON:0001017!2.53e-12!73;UBERON:0005743!2.53e-12!73;UBERON:0000073!1.37e-11!75;UBERON:0001016!1.37e-11!75;UBERON:0000468!1.11e-08!333;UBERON:0002346!4.06e-08!71;UBERON:0003075!4.06e-08!71;UBERON:0007284!4.06e-08!71;UBERON:0000033!3.40e-07!63;UBERON:0000922!3.88e-07!328
|ontology_enrichment_uberon=UBERON:0004121!1.91e-14!102;UBERON:0000924!1.91e-14!102;UBERON:0006601!1.91e-14!102;UBERON:0001017!2.53e-12!73;UBERON:0005743!2.53e-12!73;UBERON:0000073!1.37e-11!75;UBERON:0001016!1.37e-11!75;UBERON:0000468!1.11e-08!333;UBERON:0002346!4.06e-08!71;UBERON:0003075!4.06e-08!71;UBERON:0007284!4.06e-08!71;UBERON:0000033!3.40e-07!63;UBERON:0000922!3.88e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.13e-16,95;UBERON:0000924,2.13e-16,95;UBERON:0006601,2.13e-16,95;UBERON:0010371,7.67e-13,73;UBERON:0001017,1.01e-12,73;UBERON:0001016,1.02e-11,75;UBERON:0002346,3.50e-10,64;UBERON:0003075,3.50e-10,64;UBERON:0007284,3.50e-10,64;UBERON:0000922,1.70e-07,320
|phase1_expression=11.2104192973356,0,0,0,0,0.33575854382378,1.16806320297763,0,0.281577444303333,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0,0.42438965179803,0.765389611359628,0.198581902401771,0,0.319984845586813,0.68822784320151,0,0.430761996159075,0.861884930743556,0,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,1.51076181570693,0.811015449756117,1.28482726513177,3.12956537739216,10.0291571935005,4.17403747195497,3.69416808241138,2.79972843250725,2.87505128729943,0.167782606057736,0,0,0.257259436035947,1.43266719969378,0,19.624696703381,17.9856932952491,15.2119536841483,2.37191172448392,1.77858959222228,0,0.988866362566974,0,7.19040265244171,11.1423308543251,45.0012917418793,35.1015439662396,39.5410927340598,8.2838785477103,5.74258206474195,19.4760370751777,17.5397211963373,8.27296907949019,1.10115880999389,1.65993539510744,1.0752457327937,22.0250100509424,14.3635600455783,17.1901412283731,2.79182999001381,3.37657566019008,1.68078072554491,7.07108605136802,6.40672563595963,16.5895506784518,0.075726193333184,0.906858721281426,1.15945795480671,0,0,0,0.649776417447669,0,1.12355536105401,0.170430322578058,0,0,13.9434985578914,0,0,0,1.29894624606728,1.01343946190039,1.01104889002957,0.45673551887624,0.517875767294343,0.148442139064825,1.73485326766136,0.608930956624282,0.691846491768175,0.452167921657868,0.823120949949934,0.753999547978053,0.494389935468748,0.144599356919912,0,1.13236794963186,0.883366073841574,0,1.86391761218122,0.292780797011547,1.04723353406728,0,0,0,0,1.04853447583376,0,7.03664371832041,0.521472960576829,2.04572365864264,1.24672826735736,1.62241263067758,2.13862664085664,0.373220911830279,0,1.26265113531884,6.37590170517248,6.20735681970377,6.48223667299257,5.27466862425003,5.78310242786287,5.76511741281824,7.02762934197966,1.03481348295606,10.1316956678436,8.13156144721623,4.22282697993477,2.84954452155847,4.72680323683516,3.48252166522167,3.90986059175093,3.38358253591438,0,0,0.568326998791185,1.65700618028402,1.17263029990548,1.08037236876609,3.55117103377815,1.96764231747404,1.3884040159864,0.697601834251224,1.3413670069981,0.700592054203017,0.493679549740441,0.820837320395476,0.729619285912702,0.584799949701329,1.3173006917463,0.671032093801859,0.630869845692382,6.99751364179134,0,0.264450566663544,4.26576501070468,7.19933682767359,2.19074684247559,1.00841762311671,1.11189021922435,0.760902504450237,0.474529061544512,0.494096864172033,1.00534083520108,1.79060824837036,0.58489226135736,0.898819408654221,0.648414149624083,0.199141273254367,5.31070122668629,4.79843752960861,10.1436962105772,3.46207257337034,3.49114476901726,3.57692681440625,4.11037491307672,1.91893192373483,0.31399745568275,0.616985819609003,0.296452627087149,0.83422552858047,0.786235980452812,0.224862112384854,0.405720242777006,0.482354319504834,0.25462585178142,0.863088412352432,0.324270453550071,0,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0.358794827043824,0,0.554259570499814,4.73728529426212,3.91115943460862,3.22515662972857,3.05097322775053,1.84256883185997,2.38043640886014,3.12213836572478,3.62560831444239,3.5434350343804,6.218735977642,1.80249646187312,2.07221978239075,1.73578870297814,0,0,0.491764273019036,0.275936746304732,1.44495530989013,2.22702204525186,2.29508923527346,0.252470927204373,5.67914794949262,4.29482618726302,5.60100834105277,4.30143836314594,6.23836287430704,6.51076020814315,6.47697122679831,5.26060544240361,3.55759000151871,0.642642632843614,0.99358059645788,4.27357448801413,0.81443479676788,4.61916344323099,0,3.8844901784797,3.02323556964751,0.943025398779491,0.295301892880773,1.53717573971964,0.516856586336442,0.363533729477506,0.712994756769443,0.632073515871632,1.05418608574999,0,0.680879211507576,9.90336017172206,10.3486947026204,8.57348140126369,5.49754724291048,3.74574516964348,3.78462747384878,5.48036908406279,0.23467170806371,0,0,10.5527201882547,5.32832608096488,11.2785169615651,13.4890748723544,12.9671310798598,1.1659233465194,1.8542530201051,0,2.06386867963222,2.03713980106683,0.753473828018764,0.410082683163076,0,0.339956859987711,0.839708713941948,0.414599921413271,0,4.4287039101359,3.04979200690273,2.16010681643603,2.50905955217362,1.74690050996942,1.75323650300267,2.31429676030941,2.09404753587224,0.129614973291793,0.621339313086926,0,1.19613236835183,1.98550188548517,1.75006069509643,2.0665571756437,1.18269287843545,1.64300134104056,2.604087696879,0.629156066554265,0.483168241652012,0.288030006257865,0.632022241256357,2.02725215290164,1.02710957164827,1.81889152168913,1.43221356533985,1.19208812868759,2.52410443991935,1.18151621739662,1.41353029927407,1.98137697303,1.71404514732629,1.55932609183604,1.6356013078856,0.701261413089414,4.53460767230423,0.887943813496259,1.07656627931371,0.335769232728157,0.579568782096571,0.375364950902364,4.57879060668163,2.78678892802786,0,0.564751842617067,0.920650473014354,0,1.03111909406213,0,0.755393897389701,1.35004500046361,0,0,0.51776031175182,7.47268902606072,7.98049746802062,7.68301225893604,2.67417388775123,2.09613162627982,1.65459157605013,1.77797382241292,1.85431551515005,1.92551525755089,2.02157769411038,2.28131369901216,2.26351609663291,2.43467919421694,2.68905640100451,2.92920891673628,2.38146845641537,3.01299247456624,2.12200142510076,2.88460130562315,1.76638704161277,0.685738504770831,2.30718548007139,1.66905332963125,2.32554266611726,1.97629698872194,2.62305284464197,2.37806364734604,1.8414879800649,2.30866993537965,0.561142271657738,1.42362021749009,2.46261205938909,2.04615521584845,3.56354734727722,3.08650577569826,4.99621155875892,1.87145286756327,1.50409737833809,0.956441660344217,3.30887128679273,1.15933917810211
|phase1_expression=11.2104192973356,0,0,0,0,0.33575854382378,1.16806320297763,0,0.281577444303333,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0,0.42438965179803,0.765389611359628,0.198581902401771,0,0.319984845586813,0.68822784320151,0,0.430761996159075,0.861884930743556,0,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,1.51076181570693,0.811015449756117,1.28482726513177,3.12956537739216,10.0291571935005,4.17403747195497,3.69416808241138,2.79972843250725,2.87505128729943,0.167782606057736,0,0,0.257259436035947,1.43266719969378,0,19.624696703381,17.9856932952491,15.2119536841483,2.37191172448392,1.77858959222228,0,0.988866362566974,0,7.19040265244171,11.1423308543251,45.0012917418793,35.1015439662396,39.5410927340598,8.2838785477103,5.74258206474195,19.4760370751777,17.5397211963373,8.27296907949019,1.10115880999389,1.65993539510744,1.0752457327937,22.0250100509424,14.3635600455783,17.1901412283731,2.79182999001381,3.37657566019008,1.68078072554491,7.07108605136802,6.40672563595963,16.5895506784518,0.075726193333184,0.906858721281426,1.15945795480671,0,0,0,0.649776417447669,0,1.12355536105401,0.170430322578058,0,0,13.9434985578914,0,0,0,1.29894624606728,1.01343946190039,1.01104889002957,0.45673551887624,0.517875767294343,0.148442139064825,1.73485326766136,0.608930956624282,0.691846491768175,0.452167921657868,0.823120949949934,0.753999547978053,0.494389935468748,0.144599356919912,0,1.13236794963186,0.883366073841574,0,1.86391761218122,0.292780797011547,1.04723353406728,0,0,0,0,1.04853447583376,0,7.03664371832041,0.521472960576829,2.04572365864264,1.24672826735736,1.62241263067758,2.13862664085664,0.373220911830279,0,1.26265113531884,6.37590170517248,6.20735681970377,6.48223667299257,5.27466862425003,5.78310242786287,5.76511741281824,7.02762934197966,1.03481348295606,10.1316956678436,8.13156144721623,4.22282697993477,2.84954452155847,4.72680323683516,3.48252166522167,3.90986059175093,3.38358253591438,0,0,0.568326998791185,1.65700618028402,1.17263029990548,1.08037236876609,3.55117103377815,1.96764231747404,1.3884040159864,0.697601834251224,1.3413670069981,0.700592054203017,0.493679549740441,0.820837320395476,0.729619285912702,0.584799949701329,1.3173006917463,0.671032093801859,0.630869845692382,6.99751364179134,0,0.264450566663544,4.26576501070468,7.19933682767359,2.19074684247559,1.00841762311671,1.11189021922435,0.760902504450237,0.474529061544512,0.494096864172033,1.00534083520108,1.79060824837036,0.58489226135736,0.898819408654221,0.648414149624083,0.199141273254367,5.31070122668629,4.79843752960861,10.1436962105772,3.46207257337034,3.49114476901726,3.57692681440625,4.11037491307672,1.91893192373483,0.31399745568275,0.616985819609003,0.296452627087149,0.83422552858047,0.786235980452812,0.224862112384854,0.405720242777006,0.482354319504834,0.25462585178142,0.863088412352432,0.324270453550071,0,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0.358794827043824,0,0.554259570499814,4.73728529426212,3.91115943460862,3.22515662972857,3.05097322775053,1.84256883185997,2.38043640886014,3.12213836572478,3.62560831444239,3.5434350343804,6.218735977642,1.80249646187312,2.07221978239075,1.73578870297814,0,0,0.491764273019036,0.275936746304732,1.44495530989013,2.22702204525186,2.29508923527346,0.252470927204373,5.67914794949262,4.29482618726302,5.60100834105277,4.30143836314594,6.23836287430704,6.51076020814315,6.47697122679831,5.26060544240361,3.55759000151871,0.642642632843614,0.99358059645788,4.27357448801413,0.81443479676788,4.61916344323099,0,3.8844901784797,3.02323556964751,0.943025398779491,0.295301892880773,1.53717573971964,0.516856586336442,0.363533729477506,0.712994756769443,0.632073515871632,1.05418608574999,0,0.680879211507576,9.90336017172206,10.3486947026204,8.57348140126369,5.49754724291048,3.74574516964348,3.78462747384878,5.48036908406279,0.23467170806371,0,0,10.5527201882547,5.32832608096488,11.2785169615651,13.4890748723544,12.9671310798598,1.1659233465194,1.8542530201051,0,2.06386867963222,2.03713980106683,0.753473828018764,0.410082683163076,0,0.339956859987711,0.839708713941948,0.414599921413271,0,4.4287039101359,3.04979200690273,2.16010681643603,2.50905955217362,1.74690050996942,1.75323650300267,2.31429676030941,2.09404753587224,0.129614973291793,0.621339313086926,0,1.19613236835183,1.98550188548517,1.75006069509643,2.0665571756437,1.18269287843545,1.64300134104056,2.604087696879,0.629156066554265,0.483168241652012,0.288030006257865,0.632022241256357,2.02725215290164,1.02710957164827,1.81889152168913,1.43221356533985,1.19208812868759,2.52410443991935,1.18151621739662,1.41353029927407,1.98137697303,1.71404514732629,1.55932609183604,1.6356013078856,0.701261413089414,4.53460767230423,0.887943813496259,1.07656627931371,0.335769232728157,0.579568782096571,0.375364950902364,4.57879060668163,2.78678892802786,0,0.564751842617067,0.920650473014354,0,1.03111909406213,0,0.755393897389701,1.35004500046361,0,0,0.51776031175182,7.47268902606072,7.98049746802062,7.68301225893604,2.67417388775123,2.09613162627982,1.65459157605013,1.77797382241292,1.85431551515005,1.92551525755089,2.02157769411038,2.28131369901216,2.26351609663291,2.43467919421694,2.68905640100451,2.92920891673628,2.38146845641537,3.01299247456624,2.12200142510076,2.88460130562315,1.76638704161277,0.685738504770831,2.30718548007139,1.66905332963125,2.32554266611726,1.97629698872194,2.62305284464197,2.37806364734604,1.8414879800649,2.30866993537965,0.561142271657738,1.42362021749009,2.46261205938909,2.04615521584845,3.56354734727722,3.08650577569826,4.99621155875892,1.87145286756327,1.50409737833809,0.956441660344217,3.30887128679273,1.15933917810211
|short_description=p2@Vangl2
|short_description=p2@Vangl2
}}
}}

Latest revision as of 19:36, 26 September 2015

Short description:p2@Vangl2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Vangl2_5end
Coexpression cluster:MCL_coexpression_mm9:1425
Association with transcript: 0bp_to_ENSMUST00000138714, NM_033509_5end
EntrezGene:Vangl2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Vangl2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.03
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C319.62
Mouse Granule cells, donor2.CNhs12357.11731-123E317.99
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C87.19
Mouse Microglia, donor2.CNhs12634.11736-123E811.14
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D545.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F535.10
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D939.54
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D219.48
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F217.54
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.36
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D817.19
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.59
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G613.94
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F17.04
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C66.38
eyeball, embryo E14.CNhs10521.399-16E26.21
eyeball, embryo E15.CNhs10593.426-16C96.48
eyeball, embryo E17.CNhs11023.1261-18D45.27
eyeball, neonate N00.CNhs11207.633-15C65.78
eyeball, neonate N01.CNhs11140.1532-43E75.77
eyeball, neonate N02.CNhs11205.1551-44G87.03
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E210.13
forelimb, embryo E12.CNhs10600.359-14H28.13
forelimb, embryo E13.CNhs10589.384-1E24.22
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B53.91
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G17.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I54.27
intestine, embryo E13.CNhs11010.381-16D57.20
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I95.31
kidney, embryo E15.CNhs10997.434-16F84.80
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G73.58
kidney, neonate N10.CNhs11206.758-6D54.11
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G24.74
lung, embryo E14.CNhs10604.404-26F83.91
lung, embryo E15.CNhs11020.432-17C53.23
lung, embryo E16.CNhs10998.458-17B63.05
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E53.63
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E66.22
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.68
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.51
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H74.27
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G64.62
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E69.90
pituitary gland, embryo E13.CNhs11009.370-44C710.35
pituitary gland, embryo E14.CNhs11037.398-44A58.57
pituitary gland, embryo E15.CNhs10592.427-16B95.50
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C310.55
skin, neonate N00.CNhs11124.650-25G45.33
skin, neonate N03.CNhs11215.662-22H311.28
skin, neonate N06.CNhs11097.693-20I513.49
skin, neonate N10.CNhs11108.762-6C412.97
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E34.43
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A92.31
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F82.52
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D31.98
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A21.56
thymus, neonate N25.CNhs11125.1362-25G71.64
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B44.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E54.58
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I87.47
whole body, embryo E12.CNhs10587.857-27C97.98
whole body, embryo E13.CNhs10512.372-23H27.68
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.69
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell3.66e-1844
neurectodermal cell3.66e-1844
neural cell1.85e-1743
neuron3.64e-1633
neuronal stem cell3.64e-1633
neuroblast3.64e-1633
electrically signaling cell3.64e-1633
electrically responsive cell8.68e-1339
electrically active cell8.68e-1339
CNS neuron (sensu Vertebrata)1.67e-1123
neuroblast (sensu Vertebrata)1.67e-1123
embryonic cell9.71e-0770

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.13e-1695
ectoderm2.13e-1695
presumptive ectoderm2.13e-1695
ecto-epithelium7.67e-1373
central nervous system1.01e-1273
nervous system1.02e-1175
neurectoderm3.50e-1064
neural plate3.50e-1064
presumptive neural plate3.50e-1064
embryo1.70e-07320
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:173957382..173957399,-&oldid=4270593"