FFCP PHASE1:Mm9::chr1:173934671..173934684,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1425 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:173934671..173934684,- | |||
|description=CAGE_peak_at_chr1:173934671..173934684,- | |description=CAGE_peak_at_chr1:173934671..173934684,- | ||
|id=chr1:173934671..173934684,- | |id=chr1:173934671..173934684,- | ||
|ontology_enrichment_celltype=CL:0000117!4.21e-12!23;CL:0000337!4.21e-12!23;CL:0000221!5.18e-11!44;CL:0000133!5.18e-11!44;CL:0002319!1.85e-10!43;CL:0000540!1.21e-09!33;CL:0000047!1.21e-09!33;CL:0000031!1.21e-09!33;CL:0000404!1.21e-09!33;CL:0000055!6.05e-08!50;CL:0000393!1.37e-07!39;CL:0000211!1.37e-07!39 | |ontology_enrichment_celltype=CL:0000117!4.21e-12!23;CL:0000337!4.21e-12!23;CL:0000221!5.18e-11!44;CL:0000133!5.18e-11!44;CL:0002319!1.85e-10!43;CL:0000540!1.21e-09!33;CL:0000047!1.21e-09!33;CL:0000031!1.21e-09!33;CL:0000404!1.21e-09!33;CL:0000055!6.05e-08!50;CL:0000393!1.37e-07!39;CL:0000211!1.37e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.38e-12,23;CL:0000337,1.38e-12,23;CL:0000221,7.88e-11,44;CL:0000133,7.88e-11,44;CL:0002319,2.90e-10,43;CL:0000540,2.59e-09,33;CL:0000047,2.59e-09,33;CL:0000031,2.59e-09,33;CL:0000404,2.59e-09,33;CL:0000393,5.54e-07,39;CL:0000211,5.54e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.39e-13!102;UBERON:0000924!2.39e-13!102;UBERON:0006601!2.39e-13!102;UBERON:0001017!9.26e-11!73;UBERON:0005743!9.26e-11!73;UBERON:0000073!5.26e-10!75;UBERON:0001016!5.26e-10!75;UBERON:0000468!5.85e-10!333;UBERON:0000922!1.62e-09!328;UBERON:0002346!2.86e-09!71;UBERON:0003075!2.86e-09!71;UBERON:0007284!2.86e-09!71;UBERON:0000153!1.03e-08!94;UBERON:0000033!1.39e-08!63;UBERON:0001049!3.68e-08!52;UBERON:0005068!3.68e-08!52;UBERON:0006241!3.68e-08!52;UBERON:0007135!3.68e-08!52;UBERON:0003056!1.90e-07!49;UBERON:0007811!2.17e-07!86 | |ontology_enrichment_uberon=UBERON:0004121!2.39e-13!102;UBERON:0000924!2.39e-13!102;UBERON:0006601!2.39e-13!102;UBERON:0001017!9.26e-11!73;UBERON:0005743!9.26e-11!73;UBERON:0000073!5.26e-10!75;UBERON:0001016!5.26e-10!75;UBERON:0000468!5.85e-10!333;UBERON:0000922!1.62e-09!328;UBERON:0002346!2.86e-09!71;UBERON:0003075!2.86e-09!71;UBERON:0007284!2.86e-09!71;UBERON:0000153!1.03e-08!94;UBERON:0000033!1.39e-08!63;UBERON:0001049!3.68e-08!52;UBERON:0005068!3.68e-08!52;UBERON:0006241!3.68e-08!52;UBERON:0007135!3.68e-08!52;UBERON:0003056!1.90e-07!49;UBERON:0007811!2.17e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.19e-12,95;UBERON:0000924,1.19e-12,95;UBERON:0006601,1.19e-12,95;UBERON:0010371,1.76e-11,73;UBERON:0001017,7.07e-10,73;UBERON:0000922,1.33e-09,320;UBERON:0001016,3.39e-09,75;UBERON:0002346,4.84e-09,64;UBERON:0003075,4.84e-09,64;UBERON:0007284,4.84e-09,64;UBERON:0000073,3.49e-08,54;UBERON:0010314,3.98e-08,92;UBERON:0001049,1.07e-07,52;UBERON:0005068,1.07e-07,52;UBERON:0006241,1.07e-07,52;UBERON:0007135,1.07e-07,52;UBERON:0003056,2.76e-07,49 | |||
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|phase1_expression=6.72625157840135,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0.171217968225505,0,0.171200729931206,0,0,0,0,0,0.548457734422955,0,0.765389611359628,0.595745707205312,0.261199789138935,0.799962113967033,0.68822784320151,0,0.430761996159075,0,0,0,0.221730510655305,0,0,0,0,0.498703936075477,0,0,0,0.523523743973798,0,0,0,0.629484089877886,1.4192770370732,1.83546752161682,3.9119567217402,6.1047043786525,2.19686182734472,2.52758868796568,2.09979632438044,7.18762821824858,0.335565212115473,0,0,2.05807548828758,0.573066879877513,0.515672092277442,8.49729135610311,22.7466121086974,13.3104594736298,1.0165335962074,4.4464739805557,0.899899717281399,0,0.7104801149461,5.69240209984969,8.4528027170742,24.3670588924922,26.191152036348,19.7705463670299,8.85518051651791,9.05561017901615,7.59442955132715,6.22995561618536,6.43453150627015,6.60695285996332,2.55374676170375,3.37934373163736,12.7929699098288,7.86793734980723,16.6692278578163,4.18774498502071,1.12552522006336,4.43114918552749,8.83885756421003,12.2439645487229,13.9799584368975,0.151452386666368,1.13357340160178,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0.779358013808606,0,10.2815696436977,1.28326477414318,0,0,3.030874574157,3.29367825117628,1.01104889002957,0.45673551887624,0.258937883647172,0.593768556259299,2.77576522825817,1.82679286987285,3.22861696158482,2.86373017049983,2.82212897125692,0.879666139307728,0,0.722996784599558,0.884610551949874,1.29413479957927,1.54589062922275,0,0,1.17112318804619,0.83778682725382,0,0.359445373517761,0,0.254140454146129,2.54644086988199,1.37250180845588,11.5602003943835,1.21677024134594,1.27857728665165,2.0778804455956,0.973447578406546,4.9901288286655,1.24406970610093,0.505445516867349,0,8.32770834961304,2.5289231487682,4.50155324513373,7.83665052745718,4.89862793889561,7.04625461566674,5.90320864726292,2.32833033665114,4.74249584452253,5.10586416453112,2.99116911078713,4.16471891612392,5.56094498451196,3.1342694986995,4.11564272815887,5.57295947091781,0,0.257347907114715,0.284163499395593,1.44988040774851,4.22146907965973,3.42117916775928,2.60419209143731,3.93528463494808,2.77680803197281,3.25547522650571,1.60964040839772,1.98501082024188,1.15191894939436,2.29834449710733,1.21603214318784,0.877199924551994,0.439100230582101,0.671032093801859,0,13.8921226712034,0,0.528901133327089,6.18535926552179,4.87697010906921,1.67527699718721,1.81515172161008,1.33426826306922,0.570676878337677,0.474529061544512,1.97638745668813,2.26201687920243,1.1937388322469,0.974820435595601,0,0.864552199498777,0.597423819763102,3.03468641524931,6.16941968092536,3.38123207019241,6.10953983535943,4.46090720485539,4.55882829287071,3.98390183882821,1.18088118383682,1.41298855057237,0.493588655687202,0,0.667380422864376,0.786235980452812,0.449724224769707,1.01430060694251,0.241177159752417,0.763877555344259,0.287696137450811,0.648540907100142,1.37280706594041,2.87536413054709,0.744281895337007,1.5601883655728,0.505157755894224,0,0.482443521363367,0.554259570499814,3.03186258832776,3.58522948172457,4.92260748748046,5.39787571063555,2.01007508930179,1.42826184531608,3.70753930929818,4.25614889086716,6.2010113101657,6.69710028361446,3.93271955317771,4.83517949224508,3.03763023021174,1.50791283939272,0.54390568381871,0.983528546038072,1.37968373152366,2.0871576698413,1.75817529888305,2.45902418065013,1.00988370881749,0.94652465824877,1.17131623288992,2.58508077279359,1.91175038362042,0.891194696329576,0.566153061577665,3.64329631507405,2.33804686329049,1.58115111178609,1.28528526568723,1.70328102249922,3.73937767701236,2.93196526836437,3.95928295134085,0,3.15614827001476,6.34879469625977,2.07465587731488,0.590603785761546,0.307435147943927,0.516856586336442,1.09060118843252,2.13898427030833,1.26414703174326,1.05418608574999,0,1.36175842301515,8.8229936075342,10.9954881215341,4.71541477069503,4.07882537377229,6.95638388648075,4.44282355625727,5.48036908406279,0.23467170806371,0.21183207086382,0,6.10079135883476,4.52100394748536,7.53911561601948,9.07229814423837,7.2221995887827,1.7488850197791,3.33765543618917,0.341741761595705,2.27025554759545,1.85194527369712,1.88368457004691,1.0935538217682,0.457556346413045,0.509935289981566,0.69975726161829,1.10559979043539,5.72802370809068,4.11236791655476,3.04979200690273,4.32021363287205,5.01811910434725,3.27543845619266,3.64133735239016,2.97552440611209,0.523511883968059,0.388844919875379,0.621339313086926,1.12738587736838,2.54178128274764,2.48187735685646,4.27792614356905,1.80823752868824,4.22390313726945,5.75050469364194,3.51551839078665,1.46803082195995,0.241584120826006,0,2.21207784439725,3.24360344464263,4.10843828659309,3.24802057444488,2.32734704367726,2.98022032171897,4.80781798079875,3.83992770653901,3.93769154797776,4.11516755936999,6.45287584875779,6.82205165178267,4.04089734889384,3.97381467417334,3.62768613784338,1.55390167361845,2.33256027184637,0.839423081820392,0.965947970160952,0.375364950902364,4.2124873581471,3.00115730710692,0,1.6942555278512,1.38097570952153,1.718686540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| ||
|short_description=p@chr1:173934671..173934684,- | |short_description=p@chr1:173934671..173934684,- | ||
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Latest revision as of 07:02, 5 August 2015
Short description: | p@chr1:173934671..173934684, - |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:173934671..173934684, - |
Coexpression cluster: | MCL_coexpression_mm9:1425 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.38e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.38e-12 | 23 |
ectodermal cell | 7.88e-11 | 44 |
neurectodermal cell | 7.88e-11 | 44 |
neural cell | 2.90e-10 | 43 |
neuron | 2.59e-09 | 33 |
neuronal stem cell | 2.59e-09 | 33 |
neuroblast | 2.59e-09 | 33 |
electrically signaling cell | 2.59e-09 | 33 |
electrically responsive cell | 5.54e-07 | 39 |
electrically active cell | 5.54e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.19e-12 | 95 |
ectoderm | 1.19e-12 | 95 |
presumptive ectoderm | 1.19e-12 | 95 |
ecto-epithelium | 1.76e-11 | 73 |
central nervous system | 7.07e-10 | 73 |
embryo | 1.33e-09 | 320 |
nervous system | 3.39e-09 | 75 |
neurectoderm | 4.84e-09 | 64 |
neural plate | 4.84e-09 | 64 |
presumptive neural plate | 4.84e-09 | 64 |
regional part of nervous system | 3.49e-08 | 54 |
structure with developmental contribution from neural crest | 3.98e-08 | 92 |
neural tube | 1.07e-07 | 52 |
neural rod | 1.07e-07 | 52 |
future spinal cord | 1.07e-07 | 52 |
neural keel | 1.07e-07 | 52 |
pre-chordal neural plate | 2.76e-07 | 49 |