FFCP PHASE1:Mm9::chr1:173159965..173159982,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=86 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:173159965..173159982,- | |||
|description=CAGE_peak_at_chr1:173159965..173159982,- | |description=CAGE_peak_at_chr1:173159965..173159982,- | ||
|id=chr1:173159965..173159982,- | |id=chr1:173159965..173159982,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.17e-24,4;CL:0000766,2.17e-24,4;CL:0000234,2.17e-24,4;CL:0000576,2.17e-24,4;CL:0000235,2.17e-24,4;CL:0000864,2.17e-24,4;CL:0002009,2.17e-24,4;CL:0000040,2.17e-24,4;CL:0000559,2.17e-24,4;CL:0000473,4.54e-14,7;CL:0000557,4.54e-14,7;CL:0002476,1.38e-13,2;CL:0000878,1.64e-12,2;CL:0000129,1.64e-12,2;CL:0000839,2.16e-11,13;CL:0000763,3.07e-09,16;CL:0000738,8.65e-09,17;CL:0002087,8.65e-09,17;CL:0002031,3.19e-08,25;CL:0000049,9.20e-08,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.18e-18,3;DOID:4045,1.18e-18,3;DOID:0050686,1.29e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0002405!1.28e-08!70;UBERON:0002204!1.32e-08!32;UBERON:0002390!1.86e-08!45;UBERON:0003061!1.86e-08!45;UBERON:0002371!2.44e-08!16;UBERON:0002193!2.91e-08!48;UBERON:0000926!1.47e-07!193;UBERON:0004120!1.47e-07!193;UBERON:0006603!1.47e-07!193;UBERON:0001474!2.78e-07!22;UBERON:0004765!2.78e-07!22;UBERON:0001434!2.78e-07!22 | |ontology_enrichment_uberon=UBERON:0002405!1.28e-08!70;UBERON:0002204!1.32e-08!32;UBERON:0002390!1.86e-08!45;UBERON:0003061!1.86e-08!45;UBERON:0002371!2.44e-08!16;UBERON:0002193!2.91e-08!48;UBERON:0000926!1.47e-07!193;UBERON:0004120!1.47e-07!193;UBERON:0006603!1.47e-07!193;UBERON:0001474!2.78e-07!22;UBERON:0004765!2.78e-07!22;UBERON:0001434!2.78e-07!22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.50e-14,32;UBERON:0002371,3.73e-13,16;UBERON:0001474,1.80e-09,22;UBERON:0004765,1.80e-09,22;UBERON:0001434,1.80e-09,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607425802169478,1.39912375625629,0.157731082679119,0.548457734422955,0,0,2.28369187762036,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,1.5626706890476,3.14114246384279,2.35292595212406,1.36609096991689,2.91306211818692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0.899899717281399,10.8775299882367,0.7104801149461,1.49800055259202,1.53687322128622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0,0.304465478312141,0,0,0.23517741427141,0,0,0.144599356919912,0.884610551949874,0.323533699894818,0,0,0,0.292780797011547,0,0.255457055208591,0.599075622529601,0,0,0,0,0,0,0,0.20778804455956,0,0.203678727700633,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43839146485515,0.278047249225598,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0.287696137450811,1.45921704097532,0,1.43768206527355,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,18.0949540727127,21.7562273527484,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0,0.854354403989263,0.206386867963223,0.185194527369712,0.188368457004691,0.410082683163076,0.228778173206523,0.169978429993855,0,0,0,0.316335993581135,0.203319467126849,0.324016022465404,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.419437377702843,0,0,0,0,0.410843828659309,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0,0.750729901804728,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0.57386499620653,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607425802169478,1.39912375625629,0.157731082679119,0.548457734422955,0,0,2.28369187762036,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,1.5626706890476,3.14114246384279,2.35292595212406,1.36609096991689,2.91306211818692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0.899899717281399,10.8775299882367,0.7104801149461,1.49800055259202,1.53687322128622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0,0.304465478312141,0,0,0.23517741427141,0,0,0.144599356919912,0.884610551949874,0.323533699894818,0,0,0,0.292780797011547,0,0.255457055208591,0.599075622529601,0,0,0,0,0,0,0,0.20778804455956,0,0.203678727700633,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43839146485515,0.278047249225598,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0.287696137450811,1.45921704097532,0,1.43768206527355,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,18.0949540727127,21.7562273527484,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0,0.854354403989263,0.206386867963223,0.185194527369712,0.188368457004691,0.410082683163076,0.228778173206523,0.169978429993855,0,0,0,0.316335993581135,0.203319467126849,0.324016022465404,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.419437377702843,0,0,0,0,0.410843828659309,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0,0.750729901804728,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0.57386499620653,0.441182838239031,0 | ||
|short_description=p@chr1:173159965..173159982,- | |short_description=p@chr1:173159965..173159982,- | ||
}} | }} |
Latest revision as of 05:52, 5 August 2015
Short description: | p@chr1:173159965..173159982, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:173159965..173159982, - |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.17e-24 | 4 |
myeloid leukocyte | 2.17e-24 | 4 |
phagocyte | 2.17e-24 | 4 |
monocyte | 2.17e-24 | 4 |
macrophage | 2.17e-24 | 4 |
tissue-resident macrophage | 2.17e-24 | 4 |
macrophage dendritic cell progenitor | 2.17e-24 | 4 |
monoblast | 2.17e-24 | 4 |
promonocyte | 2.17e-24 | 4 |
defensive cell | 4.54e-14 | 7 |
granulocyte monocyte progenitor cell | 4.54e-14 | 7 |
bone marrow macrophage | 1.38e-13 | 2 |
central nervous system macrophage | 1.64e-12 | 2 |
microglial cell | 1.64e-12 | 2 |
myeloid lineage restricted progenitor cell | 2.16e-11 | 13 |
myeloid cell | 3.07e-09 | 16 |
leukocyte | 8.65e-09 | 17 |
nongranular leukocyte | 8.65e-09 | 17 |
hematopoietic lineage restricted progenitor cell | 3.19e-08 | 25 |
common myeloid progenitor | 9.20e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.50e-14 | 32 |
bone marrow | 3.73e-13 | 16 |
bone element | 1.80e-09 | 22 |
skeletal element | 1.80e-09 | 22 |
skeletal system | 1.80e-09 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.18e-18 | 3 |
muscle cancer | 1.18e-18 | 3 |
organ system cancer | 1.29e-09 | 6 |