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FFCP PHASE1:Mm9::chr8:86424013..86424064,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=330814
|EntrezGene=330814
|HGNC=
|HGNC=
|MCL_coexpression_id=1841
|TSSclassifier=NA
|UniProt=Q80TR1
|UniProt=Q80TR1
|association_with_transcript=9bp_to_ENSMUST00000141158_5end
|association_with_transcript=9bp_to_ENSMUST00000141158_5end
|cluster_id=chr8:86424013..86424064,+
|description=CAGE_peak_1_at_Lphn1_5end
|description=CAGE_peak_1_at_Lphn1_5end
|id=chr8:86424013..86424064,+
|id=chr8:86424013..86424064,+
|ontology_enrichment_celltype=CL:0000117!2.22e-13!23;CL:0000337!2.22e-13!23;CL:0000540!2.00e-12!33;CL:0000047!2.00e-12!33;CL:0000031!2.00e-12!33;CL:0000404!2.00e-12!33;CL:0000221!2.18e-11!44;CL:0000133!2.18e-11!44;CL:0002319!2.30e-11!43;CL:0000393!5.43e-09!39;CL:0000211!5.43e-09!39;CL:0000055!4.88e-08!50
|ontology_enrichment_celltype=CL:0000117!2.22e-13!23;CL:0000337!2.22e-13!23;CL:0000540!2.00e-12!33;CL:0000047!2.00e-12!33;CL:0000031!2.00e-12!33;CL:0000404!2.00e-12!33;CL:0000221!2.18e-11!44;CL:0000133!2.18e-11!44;CL:0002319!2.30e-11!43;CL:0000393!5.43e-09!39;CL:0000211!5.43e-09!39;CL:0000055!4.88e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.19e-13,23;CL:0000337,2.19e-13,23;CL:0000540,1.97e-12,33;CL:0000047,1.97e-12,33;CL:0000031,1.97e-12,33;CL:0000404,1.97e-12,33;CL:0000221,2.16e-11,44;CL:0000133,2.16e-11,44;CL:0002319,2.28e-11,43;CL:0000393,5.39e-09,39;CL:0000211,5.39e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.64e-30!73;UBERON:0005743!3.64e-30!73;UBERON:0000073!2.00e-28!75;UBERON:0001016!2.00e-28!75;UBERON:0002346!5.14e-28!71;UBERON:0003075!5.14e-28!71;UBERON:0007284!5.14e-28!71;UBERON:0004121!1.43e-26!102;UBERON:0000924!1.43e-26!102;UBERON:0006601!1.43e-26!102;UBERON:0001049!4.64e-26!52;UBERON:0005068!4.64e-26!52;UBERON:0006241!4.64e-26!52;UBERON:0007135!4.64e-26!52;UBERON:0000955!4.28e-25!50;UBERON:0006238!4.28e-25!50;UBERON:0002616!1.72e-24!49;UBERON:0000033!4.59e-24!63;UBERON:0003056!1.27e-20!49;UBERON:0003080!4.62e-20!40;UBERON:0002780!1.54e-19!39;UBERON:0001890!1.54e-19!39;UBERON:0006240!1.54e-19!39;UBERON:0002020!1.90e-19!34;UBERON:0000153!5.12e-19!94;UBERON:0007811!6.23e-18!86;UBERON:0002791!1.91e-16!29;UBERON:0003528!1.91e-16!29;UBERON:0001893!1.91e-16!29;UBERON:0000956!4.26e-12!21;UBERON:0001869!4.26e-12!21;UBERON:0000203!4.26e-12!21;UBERON:0002619!5.29e-10!17;UBERON:0000468!8.86e-09!333;UBERON:0000025!7.77e-08!114;UBERON:0002021!8.34e-08!10;UBERON:0000411!8.34e-08!10;UBERON:0001950!8.34e-08!10;UBERON:0004111!1.96e-07!122;UBERON:0000475!3.55e-07!200;UBERON:0000922!4.94e-07!328;UBERON:0000479!9.40e-07!349
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.53e-30,73;UBERON:0001016,1.94e-28,75;UBERON:0000073,9.23e-28,54;UBERON:0002346,2.02e-26,64;UBERON:0003075,2.02e-26,64;UBERON:0007284,2.02e-26,64;UBERON:0001049,4.53e-26,52;UBERON:0005068,4.53e-26,52;UBERON:0006241,4.53e-26,52;UBERON:0007135,4.53e-26,52;UBERON:0004121,1.35e-24,95;UBERON:0000924,1.35e-24,95;UBERON:0006601,1.35e-24,95;UBERON:0010371,4.61e-23,73;UBERON:0000955,6.79e-23,47;UBERON:0006238,6.79e-23,47;UBERON:0002616,2.66e-22,46;UBERON:0010314,8.07e-21,92;UBERON:0003056,1.24e-20,49;UBERON:0003080,4.54e-20,40;UBERON:0002780,1.51e-19,39;UBERON:0001890,1.51e-19,39;UBERON:0006240,1.51e-19,39;UBERON:0002020,1.87e-19,34;UBERON:0003528,1.89e-16,29;UBERON:0002791,1.89e-16,29;UBERON:0001893,1.89e-16,29;UBERON:0000956,4.21e-12,21;UBERON:0001869,4.21e-12,21;UBERON:0000203,4.21e-12,21;UBERON:0002619,5.24e-10,17;UBERON:0000025,7.93e-08,114;UBERON:0002021,8.28e-08,10;UBERON:0000411,8.28e-08,10;UBERON:0001950,8.28e-08,10;UBERON:0000922,1.56e-07,320;UBERON:0004111,2.00e-07,122
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.0208371527699,79.1642659851217,72.1432289648891,21.9841549951666,19.5860404255349,20.2247117202034,18.0425441608246,11.1954943309662,10.2637450152458,19.1558564364205,15.6958270277199,24.2794808030337,24.6641510381544,19.0826590401999,25.6816938427349,21.2743250638733,23.1949756160611,20.4931222693902,22.6741190232244,6.34845074122592,5.32766288097755,8.70224409111914,7.55480773638353,19.5121489972512,14.451550609741,19.0477689237956,9.4322086794789,26.0817494098389,114.644624051265,112.779682944258,107.131461013167,119.437961728863,83.5800674120184,102.733570044999,92.4780825317574,88.2629558319472,85.1907728890305,92.1613354918239,14.115079271448,30.3258903784784,30.2198482184817,26.0124187263075,22.8478347264501,20.4066294379516,28.0030877030035,24.7242068686673,26.6362943961207,24.2589323293246,28.1362022878166,29.802961939,23.3167353600007,25.3539603523282,27.3392832228719,27.6250340944183,19.8162197365703,20.6412865896164,18.5438655361488,24.1406229020412,26.0580631812916,18.4574838405711,22.1745656651008,20.0578054952613,21.2687199738647,18.5305991282772,20.3050049888778,16.8364615320219,22.1360705568755,19.6399795080208,25.7437989329458,22.9515443935063,24.5538625901814,21.0714104012914,24.3062329836238,50.711547321403,21.0538447600868,26.2142685938924,17.4072382182647,16.7649478530832,13.6802023016049
|phase1_expression=26.1042620780814,0,0,0,0,1.17515490338323,0.934450562382103,15.4947988129892,9.57363310631334,5.61754863172784,10.4442960617558,9.33334260245436,18.318478102639,17.2218192765425,0.333109761815663,1.61980213911861,1.39912375625629,0.946386496074713,1.91960207048034,3.81950686618227,38.1844372778303,7.4468213400664,6.26879493933445,0.799962113967033,0,0,0,0,0.570070258369122,0.504060259519861,0.886922042621219,6.35030673459631,12.916360539276,0,1.44425809875637,1.66234645358492,1.02084678131185,0.837063261473815,0,0,0,0,0,7.80560271448579,7.50189291024408,2.75320128242522,39.119567217402,18.3141131359575,24.1654801007919,28.3867652648454,11.7588594165305,12.9377307928474,1.34226084846189,18.1340535502836,18.821252751978,10.2903774414379,13.7536051170603,11.8604581223812,74.0478246746128,86.2255296213414,67.186128771655,11.5207140903505,16.8966011261116,2.6996991518442,2.96659908770092,4.2628806896766,43.1424159146503,54.1747810503392,77.3524507821243,61.4277019409192,55.7361147581162,83.4100874459106,82.1630972340002,52.7935344616452,36.900506342021,54.2339084099912,135.442533629248,100.489935073043,99.8442466165583,97.2001940571529,56.0819255282771,90.1180131063195,77.6128737223839,50.0858722928195,68.1480185084573,93.102633009679,79.7281412474976,73.2549822093431,6.13382165998791,7.3304413303582,12.4641730141721,2.58127163094416,0,1.07940638327563,0.649776417447669,0.448026887097336,11.0951091904084,1.70430322578058,1.55871602761721,0.70667914902068,22.8166340038222,8.98285341900225,5.09610479413291,7.11066703153331,1.29894624606728,2.02687892380079,1.51657333504435,7.53613606145796,5.17875767294343,33.3994812895856,23.9409750937267,32.273340701087,28.1350906652391,22.1562281612355,34.9238460193043,25.3846514485944,6.67426412882809,8.24216334443496,0.884610551949874,18.4414208940046,8.39197770149496,7.75800405016355,9.31958806090611,67.9251449066789,100.953312684085,3.32094171771169,2.75574786363617,0.599902730993408,1.39777249780371,67.2559970927654,83.7226103158087,76.6491547888473,103.946943474981,116.3505330853,72.725815595846,75.4421873265073,23.0156962301715,13.5603597965001,22.2396027421634,13.2578369208479,21.079511759958,20.2313851901456,27.3694437304131,26.0719334855787,36.1954175485064,31.515975190073,34.9507432607789,26.6464471861186,32.766334925792,40.0904889955777,34.31046921197,25.2075092291711,26.970583174883,27.5119211552512,17.6972637310831,27.0686602873151,1.40442637462647,0,0.568326998791185,17.8128164380532,18.2930326785255,13.1445304866541,25.3316867076175,15.7411385397923,15.1181770629631,14.8821724640261,13.9502168727802,14.3621371111618,14.1521470925593,12.9692296622485,11.0253580982364,10.2339991197733,9.22110484222413,8.72341721942416,87.0600387055487,65.2415242484663,3.63460661282178,5.02456076660734,22.1819780556643,27.4039272795317,22.4229382700442,17.3447831176075,15.5664630691409,9.51128130562796,8.0669940462567,8.07024878147653,9.29940272560997,13.131127154716,12.4777015756237,10.7858329038507,6.48414149624083,7.76650965692032,20.2944654019797,21.1359748327998,28.1769339182701,18.3286195060783,18.0375813065892,18.6561280908247,18.9709611372772,9.59465961867414,9.73392112616524,11.4759362447274,1.77871576252289,10.0107063429656,6.09332884850929,4.49724224769707,5.68008339887808,2.17059443777175,4.83789118384698,4.31544206176216,5.18832725680113,3.84385978463314,27.3159592401974,8.93138274404408,6.55279113540577,7.32478746046624,3.40855085691633,2.8946611281802,14.2259956428286,19.7071068241304,22.4891667489996,23.424821836976,17.6017686216377,28.141051250225,24.2804513703734,29.074913530812,32.9457451181939,25.2469746199603,36.8340515598795,19.3358711364571,20.3768278601757,21.8420078458082,0,0,2.95058563811422,6.07060841870411,52.9816946959713,54.3862225787823,10.8197063948606,21.4600288123717,17.9839685067266,19.5219372148319,26.4970779211343,18.6395662402991,18.2694912747563,28.0245765480944,18.6212922770451,27.7643065015746,26.8795689003636,76.4744733083901,38.8915833470656,26.531774946421,31.6000701145938,29.0347416431662,13.2745138339963,16.5090832585387,14.2092071773433,8.48722858901541,15.9463022155617,12.912276213645,10.8539883130653,16.7225515559653,17.1118741624666,12.3254335594968,5.27093042874994,10.3135543248187,25.1925308257803,30.9705081733854,28.2001930646405,30.4358589744861,36.0000674293815,36.2088699732203,27.15058839935,41.1027681304709,5.86679270159276,6.99045833850607,17.201215048287,12.366468970611,22.9279485908186,18.9985713523691,13.2503301843481,11.1615811826642,11.0762717919343,69.7199135559516,4.61351378154202,23.1153292118809,11.8524497516615,7.34636982318295,5.60446333656203,5.26189798375002,2.71965487990169,2.23922323717853,2.48759952847963,10.5013767981662,26.4140554640248,27.0414891278709,18.6849239621716,19.6542998253601,12.0099410060398,16.8580432981026,24.1348090717981,11.7790173892813,9.85073797017626,5.59205381778233,6.76431526421028,49.489976740557,38.7172867669608,52.6962720412369,39.0062666902748,48.4904080158533,63.0208371527699,79.1642659851217,72.1432289648891,21.9841549951666,19.5860404255349,20.2247117202034,18.0425441608246,11.1954943309662,10.2637450152458,19.1558564364205,15.6958270277199,24.2794808030337,24.6641510381544,19.0826590401999,25.6816938427349,21.2743250638733,23.1949756160611,20.4931222693902,22.6741190232244,6.34845074122592,5.32766288097755,8.70224409111914,7.55480773638353,19.5121489972512,14.451550609741,19.0477689237956,9.4322086794789,26.0817494098389,114.644624051265,112.779682944258,107.131461013167,119.437961728863,83.5800674120184,102.733570044999,92.4780825317574,88.2629558319472,85.1907728890305,92.1613354918239,14.115079271448,30.3258903784784,30.2198482184817,26.0124187263075,22.8478347264501,20.4066294379516,28.0030877030035,24.7242068686673,26.6362943961207,24.2589323293246,28.1362022878166,29.802961939,23.3167353600007,25.3539603523282,27.3392832228719,27.6250340944183,19.8162197365703,20.6412865896164,18.5438655361488,24.1406229020412,26.0580631812916,18.4574838405711,22.1745656651008,20.0578054952613,21.2687199738647,18.5305991282772,20.3050049888778,16.8364615320219,22.1360705568755,19.6399795080208,25.7437989329458,22.9515443935063,24.5538625901814,21.0714104012914,24.3062329836238,50.711547321403,21.0538447600868,26.2142685938924,17.4072382182647,16.7649478530832,13.6802023016049
|short_description=p1@Lphn1
|short_description=p1@Lphn1
}}
}}

Latest revision as of 20:53, 25 September 2015

Short description:p1@Lphn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lphn1_5end
Coexpression cluster:MCL_coexpression_mm9:1841
Association with transcript: 9bp_to_ENSMUST00000141158_5end
EntrezGene:Lphn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lphn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G726.10
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E915.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E79.57
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E610.44
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.33
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E418.32
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E817.22
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A338.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.27
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.81
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.50
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B739.12
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C218.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B824.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C328.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I918.13
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A118.82
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.75
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.86
Mouse Granule cells, donor1.CNhs12131.11713-123C374.05
Mouse Granule cells, donor2.CNhs12357.11731-123E386.23
Mouse Granule cells, donor3.CNhs12108.11636-122C767.19
Mouse Meningeal cells, donor1.CNhs12132.11716-123C611.52
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C843.14
Mouse Microglia, donor2.CNhs12634.11736-123E854.17
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D577.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F561.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D955.74
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F183.41
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D582.16
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D252.79
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F236.90
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D654.23
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3135.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3100.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D799.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D497.20
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F456.08
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D890.12
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E477.61
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E550.09
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I668.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D693.10
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F679.73
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E173.25
Mouse Schwann, donor1.CNhs12507.11728-123D96.13
Mouse Schwann, donor2.CNhs12573.11746-123F97.33
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.46
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G622.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.54
accessory axillary lymph node, adult.CNhs10475.1063-29H95.18
adrenal gland, adult.CNhs10508.49-24D733.40
adrenal gland, embryo E14.CNhs11038.406-44C523.94
adrenal gland, embryo E16.CNhs11004.1254-43D632.27
adrenal gland, embryo E17.CNhs11043.1263-45I128.14
adrenal gland, embryo E18.CNhs11026.1262-18F522.16
adrenal gland, neonate N00.CNhs11191.1311-23C134.92
adrenal gland, neonate N25.CNhs11223.1377-27I325.38
amnion, adult pregnant day17.5.CNhs10488.583-22A86.67
aorta, adult.CNhs10498.46-23H18.24
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F518.44
bone (os femoris), neonate N16.CNhs11225.1525-43A68.39
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B267.93
cerebellum, neonate N30.CNhs11135.1395-42I2100.95
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A467.26
corpus striatum, adult.CNhs10487.19-21D883.72
corpus striatum, neonate N00.CNhs11226.630-43F176.65
cortex, adult.CNhs10473.12-14D5103.95
cortex, neonate N30.CNhs11107.1392-42F2116.35
diencephalon, adult.CNhs10482.20-12F272.73
diencephalon, neonate N30.CNhs11201.1388-42B275.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B123.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.56
epididymis, adult.CNhs10490.58-23B222.24
eyeball, adult.CNhs10484.31-12G413.26
eyeball, embryo E12.CNhs11016.345-16C621.08
eyeball, embryo E14.CNhs10521.399-16E220.23
eyeball, embryo E15.CNhs10593.426-16C927.37
eyeball, embryo E17.CNhs11023.1261-18D426.07
eyeball, neonate N00.CNhs11207.633-15C636.20
eyeball, neonate N01.CNhs11140.1532-43E731.52
eyeball, neonate N02.CNhs11205.1551-44G834.95
eyeball, neonate N16.CNhs11188.777-19A226.65
forelimb, embryo E11.CNhs10596.335-25E232.77
forelimb, embryo E12.CNhs10600.359-14H240.09
forelimb, embryo E13.CNhs10589.384-1E234.31
forelimb, embryo E14.CNhs10577.413-26A825.21
forelimb, embryo E15.CNhs11007.437-20E726.97
forelimb, embryo E17.CNhs10598.1517-43C427.51
forelimb, embryo E18.CNhs11008.1520-43B517.70
gonad, embryo E13.CNhs11044.1564-45I627.07
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E917.81
heart, embryo E12.CNhs11015.353-12F518.29
heart, embryo E13.CNhs11013.376-3I913.14
heart, embryo E14.CNhs10597.403-26D425.33
heart, embryo E15.CNhs11017.431-16C815.74
heart, embryo E16.CNhs11021.457-17C615.12
heart, embryo E17.CNhs11025.479-18E514.88
heart, embryo E18.CNhs11030.1283-20G313.95
heart, neonate N00.CNhs11213.639-21E314.36
heart, neonate N03.CNhs11221.1349-25I214.15
heart, neonate N10.CNhs11118.749-24G112.97
heart, neonate N16.CNhs11209.782-15G111.03
heart, neonate N20.CNhs11127.821-26I610.23
heart, neonate N25.CNhs11196.1351-25D39.22
heart, neonate N30.CNhs11202.1390-42D28.72
hippocampus, adult.CNhs10478.13-16E887.06
hippocampus, neonate N00.CNhs11228.627-43G165.24
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A35.02
intestine, embryo E12.CNhs11019.1251-16I522.18
intestine, embryo E13.CNhs11010.381-16D527.40
intestine, embryo E15.CNhs10602.976-16D822.42
intestine, embryo E16.CNhs10585.463-22H417.34
intestine, embryo E17.CNhs10582.482-18D315.57
intestine, embryo E18.CNhs10526.1289-20F79.51
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E98.07
intestine, neonate N06.CNhs11102.688-20B89.30
intestine, neonate N07.CNhs11095.720-20F213.13
intestine, neonate N10.CNhs11098.755-23A512.48
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E36.48
intestine, neonate N30.CNhs11131.1384-42G17.77
kidney, embryo E14.CNhs10606.411-4I920.29
kidney, embryo E15.CNhs10997.434-16F821.14
kidney, embryo E16.CNhs10584.464-22A528.18
kidney, embryo E17.CNhs11028.483-18I218.33
kidney, embryo E18.CNhs11001.1288-20C718.04
kidney, neonate N00.CNhs11214.646-21G718.66
kidney, neonate N10.CNhs11206.758-6D518.97
kidney, neonate N20.CNhs11113.832-19I19.59
kidney, neonate N25.CNhs11122.1353-25F39.73
kidney, neonate N30.CNhs11203.1385-42H111.48
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F810.01
liver, embryo E13.CNhs10524.378-3H66.09
liver, embryo E14.CNhs10594.409-16E14.50
liver, embryo E15.CNhs10520.433-16D75.68
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A34.84
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F45.19
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A827.32
liver, neonate N07.CNhs11103.716-20H28.93
liver, neonate N10.CNhs11115.751-24B96.55
liver, neonate N20.CNhs11220.823-25A37.32
liver, neonate N25.CNhs11198.1368-26H13.41
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B114.23
lung, embryo E12.CNhs10522.354-16G219.71
lung, embryo E14.CNhs10604.404-26F822.49
lung, embryo E15.CNhs11020.432-17C523.42
lung, embryo E16.CNhs10998.458-17B617.60
lung, embryo E17.CNhs10605.480-44A628.14
lung, embryo E18.CNhs10583.1287-20I624.28
lung, neonate N00.CNhs11224.640-42C629.07
lung, neonate N06.CNhs11212.683-20E532.95
lung, neonate N07.CNhs11111.715-19A325.25
lung, neonate N10.CNhs11219.750-23E636.83
lung, neonate N20.CNhs11109.822-18A419.34
lung, neonate N25.CNhs11119.1359-25C720.38
lung, neonate N30.CNhs11133.1394-42H221.84
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H26.07
medulla oblongata, adult.CNhs10477.17-12C252.98
medulla oblongata, neonate N30.CNhs11200.1396-42A354.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C221.46
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.98
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E219.52
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E326.50
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D718.64
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D818.27
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D928.02
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D418.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D527.76
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D626.88
olfactory brain, adult.CNhs10489.18-22I976.47
ovary, adult.CNhs10507.91-2I738.89
ovary, embryo E18.CNhs11040.505-44H726.53
ovary, neonate N00.CNhs11217.1299-22I431.60
oviduct, adult pregnant day01.CNhs10500.988-6G629.03
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F416.51
pancreas, embryo E15.CNhs11042.1556-45F214.21
pancreas, embryo E16.CNhs11003.460-26E58.49
pancreas, embryo E17.CNhs10599.1558-45G315.95
pancreas, embryo E18.CNhs10580.1535-43I712.91
pancreas, neonate N00.CNhs11105.645-26G910.85
pancreas, neonate N01.CNhs11138.1531-43D716.72
pancreas, neonate N02.CNhs11139.1539-43D817.11
pancreas, neonate N16.CNhs11136.787-43B612.33
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G825.19
pituitary gland, embryo E12.CNhs11018.346-16E630.97
pituitary gland, embryo E13.CNhs11009.370-44C728.20
pituitary gland, embryo E14.CNhs11037.398-44A530.44
pituitary gland, embryo E15.CNhs10592.427-16B936.00
pituitary gland, embryo E16.CNhs11036.449-43F636.21
pituitary gland, embryo E17.CNhs11039.1265-44F527.15
pituitary gland, neonate N00.CNhs11190.1308-22E941.10
placenta, adult pregnant day10.CNhs10472.539-13I75.87
placenta, adult pregnant day17.CNhs10464.577-18G36.99
prostate, adult.CNhs10470.859-1F817.20
skin, adult.CNhs10492.30-1C312.37
skin, neonate N00.CNhs11124.650-25G422.93
skin, neonate N03.CNhs11215.662-22H319.00
skin, neonate N06.CNhs11097.693-20I513.25
skin, neonate N10.CNhs11108.762-6C411.16
small intestine, neonate N16.CNhs11114.790-21I111.08
spinal cord, adult.CNhs10505.24-13C969.72
spleen, adult.CNhs10465.25-2G24.61
spleen, embryo E16.CNhs11035.461-43C123.12
spleen, embryo E18.CNhs11011.1271-21F211.85
spleen, neonate N10.CNhs11116.752-24D17.35
spleen, neonate N20.CNhs11112.824-19H15.60
spleen, neonate N25.CNhs11099.1354-25G35.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.49
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E326.41
stomach, embryo E15.CNhs10603.1252-16G827.04
stomach, embryo E16.CNhs11022.459-17D418.68
stomach, embryo E17.CNhs11006.1035-18D519.65
stomach, embryo E18.CNhs10999.1286-20C612.01
stomach, neonate N03.CNhs11193.1340-24B816.86
stomach, neonate N07.CNhs11210.718-18A924.13
stomach, neonate N25.CNhs11104.1355-25E411.78
stomach, neonate N30.CNhs11134.1386-42I19.85
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G56.76
testis, embryo E13.CNhs11031.389-23F549.49
testis, embryo E15.CNhs11034.443-27C538.72
testis, embryo E16.CNhs11033.470-26G552.70
testis, embryo E17.CNhs11029.486-18I539.01
testis, embryo E18.CNhs11027.503-18G548.49
testis, neonate N00.CNhs11189.1300-22B763.02
testis, neonate N07.CNhs11222.726-26I479.16
testis, neonate N10.CNhs11204.763-44D972.14
testis, neonate N20.CNhs11110.839-18H321.98
testis, neonate N30.CNhs11130.1391-42E219.59
thymus, adult.CNhs10471.38-12B520.22
thymus, embryo E14.CNhs11041.402-44I418.04
thymus, embryo E15.CNhs11005.430-45I211.20
thymus, embryo E16.CNhs11002.456-26C510.26
thymus, embryo E17.CNhs10581.478-18C119.16
thymus, embryo E18.CNhs10595.1273-19G415.70
thymus, neonate N02.CNhs11181.1541-43F824.28
thymus, neonate N03.CNhs11137.2104-43C724.66
thymus, neonate N06.CNhs11197.681-26C419.08
thymus, neonate N07.CNhs11211.713-19D325.68
thymus, neonate N10.CNhs11194.748-24E421.27
thymus, neonate N20.CNhs11186.820-7A223.19
thymus, neonate N25.CNhs11125.1362-25G720.49
thymus, neonate N30.CNhs11132.1393-42G222.67
tongue, adult.CNhs10499.32-1B46.35
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.55
urinary bladder, adult.CNhs10481.879-12E419.51
uterus, adult pregnant day19.CNhs10497.590-15F514.45
uterus, adult.CNhs10509.92-27E519.05
vagina, adult.CNhs10502.89-27D59.43
vesicular gland, adult.CNhs10491.51-27F826.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1114.64
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2112.78
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3107.13
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7119.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A483.58
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5102.73
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A692.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A788.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A885.19
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A992.16
whole body, embryo E11.CNhs11014.324-5I814.12
whole body, embryo E12.CNhs10587.857-27C930.33
whole body, embryo E13.CNhs10512.372-23H230.22
whole body, embryo E14.5.CNhs10578.420-27D226.01
whole body, embryo E14.CNhs10519.395-14B122.85
whole body, embryo E16.CNhs10514.453-14F220.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G528.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G524.72
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G526.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G524.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G528.14
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G529.80
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G523.32
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G525.35
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G527.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G527.63
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G520.64
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G518.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G524.14
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G526.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.46
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G522.17
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G520.06
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G521.27
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.53
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G520.31
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G522.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G525.74
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G522.95
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G524.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G521.07
whole body, embryo E17.5.CNhs10513.490-9F924.31
whole body, embryo E17.CNhs10517.475-3I550.71
whole body, embryo E18.CNhs10516.493-3B321.05
whole body, neonate N00.CNhs10525.657-19C226.21
whole body, neonate N01.CNhs10576.659-23C617.41
whole body, neonate N06.CNhs10515.692-21D116.76
whole body, neonate N10.CNhs10518.761-6B413.68





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.19e-1323
neuroblast (sensu Vertebrata)2.19e-1323
neuron1.97e-1233
neuronal stem cell1.97e-1233
neuroblast1.97e-1233
electrically signaling cell1.97e-1233
ectodermal cell2.16e-1144
neurectodermal cell2.16e-1144
neural cell2.28e-1143
electrically responsive cell5.39e-0939
electrically active cell5.39e-0939

Uber anatomy
Ontology termp-valuen
central nervous system3.53e-3073
nervous system1.94e-2875
regional part of nervous system9.23e-2854
neurectoderm2.02e-2664
neural plate2.02e-2664
presumptive neural plate2.02e-2664
neural tube4.53e-2652
neural rod4.53e-2652
future spinal cord4.53e-2652
neural keel4.53e-2652
ectoderm-derived structure1.35e-2495
ectoderm1.35e-2495
presumptive ectoderm1.35e-2495
ecto-epithelium4.61e-2373
brain6.79e-2347
future brain6.79e-2347
regional part of brain2.66e-2246
structure with developmental contribution from neural crest8.07e-2192
pre-chordal neural plate1.24e-2049
anterior neural tube4.54e-2040
regional part of forebrain1.51e-1939
forebrain1.51e-1939
future forebrain1.51e-1939
gray matter1.87e-1934
brain grey matter1.89e-1629
regional part of telencephalon1.89e-1629
telencephalon1.89e-1629
cerebral cortex4.21e-1221
cerebral hemisphere4.21e-1221
pallium4.21e-1221
regional part of cerebral cortex5.24e-1017
tube7.93e-08114
occipital lobe8.28e-0810
visual cortex8.28e-0810
neocortex8.28e-0810
embryo1.56e-07320
anatomical conduit2.00e-07122
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