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FFCP PHASE1:Mm9::chr1:162282144..162282206,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=29809
|EntrezGene=29809
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=A6H6A9
|UniProt=A6H6A9
|association_with_transcript=-442bp_to_ENSMUST00000028052,NM_001038621,uc007deh.1_5end
|association_with_transcript=-442bp_to_ENSMUST00000028052,NM_001038621,uc007deh.1_5end
|cluster_id=chr1:162282144..162282206,-
|description=CAGE_peak_4_at_Rabgap1l_5end
|description=CAGE_peak_4_at_Rabgap1l_5end
|id=chr1:162282144..162282206,-
|id=chr1:162282144..162282206,-
|ontology_enrichment_celltype=CL:0000540!5.12e-15!33;CL:0000047!5.12e-15!33;CL:0000031!5.12e-15!33;CL:0000404!5.12e-15!33;CL:0000117!4.23e-14!23;CL:0000337!4.23e-14!23;CL:0000393!2.75e-11!39;CL:0000211!2.75e-11!39;CL:0000221!1.08e-10!44;CL:0000133!1.08e-10!44;CL:0002319!2.74e-10!43;CL:0000055!1.99e-07!50
|ontology_enrichment_celltype=CL:0000540!5.12e-15!33;CL:0000047!5.12e-15!33;CL:0000031!5.12e-15!33;CL:0000404!5.12e-15!33;CL:0000117!4.23e-14!23;CL:0000337!4.23e-14!23;CL:0000393!2.75e-11!39;CL:0000211!2.75e-11!39;CL:0000221!1.08e-10!44;CL:0000133!1.08e-10!44;CL:0002319!2.74e-10!43;CL:0000055!1.99e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000540,6.64e-18,33;CL:0000047,6.64e-18,33;CL:0000031,6.64e-18,33;CL:0000404,6.64e-18,33;CL:0000117,8.64e-17,23;CL:0000337,8.64e-17,23;CL:0000393,1.14e-13,39;CL:0000211,1.14e-13,39;CL:0000221,3.28e-12,44;CL:0000133,3.28e-12,44;CL:0002319,9.98e-12,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon=UBERON:0001017!7.15e-25!73;UBERON:0005743!7.15e-25!73;UBERON:0000073!2.13e-24!75;UBERON:0001016!2.13e-24!75;UBERON:0002346!3.81e-22!71;UBERON:0003075!3.81e-22!71;UBERON:0007284!3.81e-22!71;UBERON:0004121!5.56e-22!102;UBERON:0000924!5.56e-22!102;UBERON:0006601!5.56e-22!102;UBERON:0001049!2.38e-21!52;UBERON:0005068!2.38e-21!52;UBERON:0006241!2.38e-21!52;UBERON:0007135!2.38e-21!52;UBERON:0000955!7.55e-20!50;UBERON:0006238!7.55e-20!50;UBERON:0000033!9.89e-20!63;UBERON:0002616!2.54e-19!49;UBERON:0002020!7.52e-19!34;UBERON:0003056!2.66e-16!49;UBERON:0003080!3.02e-16!40;UBERON:0002780!1.16e-15!39;UBERON:0001890!1.16e-15!39;UBERON:0006240!1.16e-15!39;UBERON:0002791!1.53e-15!29;UBERON:0003528!1.53e-15!29;UBERON:0001893!1.53e-15!29;UBERON:0000956!1.56e-11!21;UBERON:0001869!1.56e-11!21;UBERON:0000203!1.56e-11!21;UBERON:0000153!3.07e-09!94;UBERON:0007811!4.81e-09!86;UBERON:0002619!6.93e-09!17;UBERON:0002021!8.55e-08!10;UBERON:0000411!8.55e-08!10;UBERON:0001950!8.55e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.56e-28,73;UBERON:0001016,8.72e-28,75;UBERON:0000073,5.36e-26,54;UBERON:0002346,4.43e-25,64;UBERON:0003075,4.43e-25,64;UBERON:0007284,4.43e-25,64;UBERON:0001049,2.29e-24,52;UBERON:0005068,2.29e-24,52;UBERON:0006241,2.29e-24,52;UBERON:0007135,2.29e-24,52;UBERON:0004121,8.08e-24,95;UBERON:0000924,8.08e-24,95;UBERON:0006601,8.08e-24,95;UBERON:0010371,1.46e-22,73;UBERON:0002020,6.25e-22,34;UBERON:0000955,2.94e-20,47;UBERON:0006238,2.94e-20,47;UBERON:0002616,1.22e-19,46;UBERON:0003528,6.29e-18,29;UBERON:0002791,6.29e-18,29;UBERON:0001893,6.29e-18,29;UBERON:0003080,7.44e-18,40;UBERON:0003056,1.84e-17,49;UBERON:0002780,3.70e-17,39;UBERON:0001890,3.70e-17,39;UBERON:0006240,3.70e-17,39;UBERON:0010314,1.10e-14,92;UBERON:0000956,4.54e-13,21;UBERON:0001869,4.54e-13,21;UBERON:0000203,4.54e-13,21;UBERON:0002619,6.88e-10,17;UBERON:0002021,3.91e-09,10;UBERON:0000411,3.91e-09,10;UBERON:0001950,3.91e-09,10;UBERON:0003076,4.07e-07,12;UBERON:0003057,4.07e-07,12
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|phase1_expression=4.48416771893423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,0.506884656097573,0,0,1.30815093828268,0.219686182734472,0.388859798148567,0,0,0.167782606057736,0,0,0.257259436035947,0,0,16.9945827122062,22.2176211294254,22.8179305262225,0.677689064138264,0,0.449949858640699,0,0,0.299600110518405,0.768436610643109,37.6393292679774,33.4814727062593,33.021018932167,22.8520787523043,22.307722636113,14.0864419097197,8.24271050756833,19.3035945188104,33.0347642998166,23.7498448838449,30.4140935847362,16.353899678544,19.3038928001084,24.4829284161677,14.7966989470732,18.0084035210138,26.7396933609418,71.5947462701013,58.9418758508286,33.5519002485541,0.227178579999552,1.20914496170857,0,0,0,0,0,0,0.983110940922263,0.852151612890289,0,0.35333957451034,8.59144860637751,0,0,0,0,0,0.505524445014783,0.45673551887624,2.07150306917737,1.03909497345377,0.520455980298408,2.43572382649713,1.15307748628029,2.56228488939458,3.17489509266403,0.251333182659351,0,2.02439099687876,0,0.485300549842228,0.220841518460394,0.484875253135222,0,26.9358333250623,19.4785437336513,0,0,0.599902730993408,0.127070227073065,24.5656648623909,19.2150253183823,10.3036568732549,37.1984045211472,31.1972857943003,24.103413168909,22.5515355664183,7.43427356107309,0.622034853050465,1.0108910337347,0.210441855886474,0.520481771850815,1.14951052216736,2.34080768746954,2.86339153887859,3.6739709541717,3.71529788826064,2.81105173679186,2.58703370739016,0.646703978798527,1.13463648100692,0.527853372491847,0.657587197282725,2.50242524303038,0.348252166522167,1.85203922767149,2.58744546864041,0,0,0.284163499395593,0,0.234526059981096,0.720248245844059,0.946978942340841,0.983821158737019,0.462801338662135,0.232533944750408,0.268273401399619,0.583826711835847,0.329119699826961,0.32833492815819,0.648550476366846,0.146199987425332,0.219550115291051,0.536825675041487,64.5590142091871,26.1377715443382,0,0,0.853153002140936,1.16118335930219,2.19074684247559,1.4117846723634,2.00140239460383,0.760902504450237,0.474529061544512,0.823494773620054,0.754005626400808,0.994782360205754,0.974820435595601,0.898819408654221,0,0,0.189667900953082,0.456994050438915,1.1270773567308,0.203651327845314,0.969762435838129,0.420814919341911,0,0,0,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0,0.325929952884052,0.848725428875941,0.704070744865506,0.670025029767263,0,0.195133647857799,0.472905432318573,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,22.6376331882787,19.9259867206745,0.163934945376675,0.504941854408746,2.83957397474631,3.51394869866975,8.40151251157916,1.43381278771531,1.33679204449436,3.39691836946599,1.61924280669958,2.63030272120181,4.34816555741176,18.315315036043,4.25820255624806,3.02711526234334,5.86393053672874,5.93892442701128,0,6.79785781233948,3.93020624054176,4.71512699389745,0.885905678642318,1.84461088766356,1.55056975900933,3.27180356529755,1.78248689192361,0.316036757935816,1.05418608574999,0,1.70219802876894,1.08036656418786,0.905510786479282,1.07168517515796,0.354680467284547,1.96205699362278,2.63278432963394,1.522324745573,0,0,2.64634077665954,1.48397627647332,1.61464426695906,0.603129249281559,0.238744688006273,0.492422699235184,0,26.8866687915239,0.170870880797853,0.619160603889667,0.740778109478847,0,0,0,0,0.139951452323658,0,0,0.158167996790568,3.25311147402958,1.94409613479242,1.67270636811575,1.09181281873089,1.88810084938749,1.1571483801547,0,0.518459893167171,0,0,0.149516546043979,0,0.972255941720238,0.904118764344118,1.68956125490778,2.46450201156083,1.5624526181274,1.04859344425711,0,0.288030006257865,0,0.405450430580328,0.718976700153791,0.389762468933385,0.358053391334963,0.198681354781265,0.240390899039938,0.147689527174577,0.201932899896295,0.15241361331,0,0,0.288635524920988,0.467507608726276,0.906921534460845,0,0,0.671538465456314,0.772758376128762,0.187682475451182,0.183151624267265,0.428736758158132,0.501572104035363,34.4498623996411,40.5086208126316,44.6858500482729,32.1365450982696,29.4585483501376,29.4603619981983,28.3509450097358,30.1715206160228,28.5479717660049,32.6188996403647,1.55681021376265,5.1873233542134,2.90247129782028,6.80698807791223,7.54607385460736,6.80220981265052,8.22312892865976,9.88968274746692,12.194929964489,12.1294661646623,8.11133759648767,8.48818536237343,7.67860361253036,8.1311943554184,6.31790158511746,5.71552429539688,6.37363792696705,5.59436739344745,6.1812885120496,8.39033844766065,4.80016953339582,7.45398385869217,7.15308569841963,8.57543858130738,7.81107857447244,7.78454392603424,4.75612729469209,7.62902163169744,7.4692262615224,11.2228454331548,7.94854621431967,5.41774653065599,7.7753898202241,6.66228417099654,4.24394544158511,8.24374907195222,5.6143586026898,5.37177635120746,5.16478496585877,2.42650561031467,3.47801753430632
|short_description=p4@Rabgap1l
|short_description=p4@Rabgap1l
}}
}}

Latest revision as of 15:41, 26 September 2015

Short description:p4@Rabgap1l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rabgap1l_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -442bp_to_ENSMUST00000028052, NM_001038621, uc007deh.1_5end
EntrezGene:Rabgap1l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Rabgap1l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C316.99
Mouse Granule cells, donor2.CNhs12357.11731-123E322.22
Mouse Granule cells, donor3.CNhs12108.11636-122C722.82
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D537.64
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F533.48
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D933.02
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F122.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D522.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D214.09
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.24
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D619.30
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D333.03
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F323.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D730.41
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.35
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.30
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D824.48
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E414.80
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I626.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D671.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F658.94
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E133.55
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.59
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F52.56
adrenal gland, neonate N00.CNhs11191.1311-23C13.17
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B226.94
cerebellum, neonate N30.CNhs11135.1395-42I219.48
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A424.57
corpus striatum, adult.CNhs10487.19-21D819.22
corpus striatum, neonate N00.CNhs11226.630-43F110.30
cortex, adult.CNhs10473.12-14D537.20
cortex, neonate N30.CNhs11107.1392-42F231.20
diencephalon, adult.CNhs10482.20-12F224.10
diencephalon, neonate N30.CNhs11201.1388-42B222.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C63.67
eyeball, neonate N01.CNhs11140.1532-43E73.72
eyeball, neonate N02.CNhs11205.1551-44G82.81
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E864.56
hippocampus, neonate N00.CNhs11228.627-43G126.14
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C222.64
medulla oblongata, neonate N30.CNhs11200.1396-42A319.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.40
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I918.32
ovary, adult.CNhs10507.91-2I74.26
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I45.86
oviduct, adult pregnant day01.CNhs10500.988-6G65.94
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F46.80
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E54.72
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C926.89
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D41.94
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A134.45
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A240.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A344.69
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D732.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A429.46
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A529.46
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A628.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A730.17
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A828.55
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A932.62
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D26.81
whole body, embryo E14.CNhs10519.395-14B17.55
whole body, embryo E16.CNhs10514.453-14F26.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.19
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.13
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.45
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.81
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.42
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.66
whole body, embryo E17.5.CNhs10513.490-9F94.24
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B35.61
whole body, neonate N00.CNhs10525.657-19C25.37
whole body, neonate N01.CNhs10576.659-23C65.16
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron6.64e-1833
neuronal stem cell6.64e-1833
neuroblast6.64e-1833
electrically signaling cell6.64e-1833
CNS neuron (sensu Vertebrata)8.64e-1723
neuroblast (sensu Vertebrata)8.64e-1723
electrically responsive cell1.14e-1339
electrically active cell1.14e-1339
ectodermal cell3.28e-1244
neurectodermal cell3.28e-1244
neural cell9.98e-1243

Uber anatomy
Ontology termp-valuen
central nervous system1.56e-2873
nervous system8.72e-2875
regional part of nervous system5.36e-2654
neurectoderm4.43e-2564
neural plate4.43e-2564
presumptive neural plate4.43e-2564
neural tube2.29e-2452
neural rod2.29e-2452
future spinal cord2.29e-2452
neural keel2.29e-2452
ectoderm-derived structure8.08e-2495
ectoderm8.08e-2495
presumptive ectoderm8.08e-2495
ecto-epithelium1.46e-2273
gray matter6.25e-2234
brain2.94e-2047
future brain2.94e-2047
regional part of brain1.22e-1946
brain grey matter6.29e-1829
regional part of telencephalon6.29e-1829
telencephalon6.29e-1829
anterior neural tube7.44e-1840
pre-chordal neural plate1.84e-1749
regional part of forebrain3.70e-1739
forebrain3.70e-1739
future forebrain3.70e-1739
structure with developmental contribution from neural crest1.10e-1492
cerebral cortex4.54e-1321
cerebral hemisphere4.54e-1321
pallium4.54e-1321
regional part of cerebral cortex6.88e-1017
occipital lobe3.91e-0910
visual cortex3.91e-0910
neocortex3.91e-0910
posterior neural tube4.07e-0712
chordal neural plate4.07e-0712
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