FFCP PHASE1:Mm9::chr1:145586681..145586696,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69367 | |EntrezGene=69367 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q923X4 | |UniProt=Q923X4 | ||
|association_with_transcript=0bp_to_ENSMUST00000050491,ENSMUST00000126514,ENSMUST00000148600_5end | |association_with_transcript=0bp_to_ENSMUST00000050491,ENSMUST00000126514,ENSMUST00000148600_5end | ||
|cluster_id=chr1:145586681..145586696,+ | |||
|description=CAGE_peak_3_at_Glrx2_5end | |description=CAGE_peak_3_at_Glrx2_5end | ||
|id=chr1:145586681..145586696,+ | |id=chr1:145586681..145586696,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.24e-14!23;CL:0000337!2.24e-14!23;CL:0000221!6.39e-11!44;CL:0000133!6.39e-11!44;CL:0002319!1.48e-10!43;CL:0000055!4.13e-09!50;CL:0000540!5.38e-09!33;CL:0000047!5.38e-09!33;CL:0000031!5.38e-09!33;CL:0000404!5.38e-09!33;CL:0000393!3.23e-08!39;CL:0000211!3.23e-08!39 | |ontology_enrichment_celltype=CL:0000117!2.24e-14!23;CL:0000337!2.24e-14!23;CL:0000221!6.39e-11!44;CL:0000133!6.39e-11!44;CL:0002319!1.48e-10!43;CL:0000055!4.13e-09!50;CL:0000540!5.38e-09!33;CL:0000047!5.38e-09!33;CL:0000031!5.38e-09!33;CL:0000404!5.38e-09!33;CL:0000393!3.23e-08!39;CL:0000211!3.23e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.47e-21,23;CL:0000337,7.47e-21,23;CL:0000221,1.18e-15,44;CL:0000133,1.18e-15,44;CL:0002319,4.19e-15,43;CL:0000540,4.54e-13,33;CL:0000047,4.54e-13,33;CL:0000031,4.54e-13,33;CL:0000404,4.54e-13,33;CL:0000393,3.52e-11,39;CL:0000211,3.52e-11,39;CL:0002321,4.75e-09,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.15e-19!52;UBERON:0005068!2.15e-19!52;UBERON:0006241!2.15e-19!52;UBERON:0007135!2.15e-19!52;UBERON:0001017!2.28e-19!73;UBERON:0005743!2.28e-19!73;UBERON:0000073!6.64e-19!75;UBERON:0001016!6.64e-19!75;UBERON:0000033!2.79e-18!63;UBERON:0002020!3.18e-18!34;UBERON:0000955!3.71e-18!50;UBERON:0006238!3.71e-18!50;UBERON:0004121!7.71e-18!102;UBERON:0000924!7.71e-18!102;UBERON:0006601!7.71e-18!102;UBERON:0002616!8.70e-18!49;UBERON:0002346!6.13e-17!71;UBERON:0003075!6.13e-17!71;UBERON:0007284!6.13e-17!71;UBERON:0002791!2.84e-15!29;UBERON:0003528!2.84e-15!29;UBERON:0001893!2.84e-15!29;UBERON:0003056!3.49e-15!49;UBERON:0003080!4.79e-14!40;UBERON:0002780!1.39e-13!39;UBERON:0001890!1.39e-13!39;UBERON:0006240!1.39e-13!39;UBERON:0007811!6.83e-12!86;UBERON:0000956!1.24e-10!21;UBERON:0001869!1.24e-10!21;UBERON:0000203!1.24e-10!21;UBERON:0000153!2.30e-10!94;UBERON:0002619!1.45e-08!17 | |ontology_enrichment_uberon=UBERON:0001049!2.15e-19!52;UBERON:0005068!2.15e-19!52;UBERON:0006241!2.15e-19!52;UBERON:0007135!2.15e-19!52;UBERON:0001017!2.28e-19!73;UBERON:0005743!2.28e-19!73;UBERON:0000073!6.64e-19!75;UBERON:0001016!6.64e-19!75;UBERON:0000033!2.79e-18!63;UBERON:0002020!3.18e-18!34;UBERON:0000955!3.71e-18!50;UBERON:0006238!3.71e-18!50;UBERON:0004121!7.71e-18!102;UBERON:0000924!7.71e-18!102;UBERON:0006601!7.71e-18!102;UBERON:0002616!8.70e-18!49;UBERON:0002346!6.13e-17!71;UBERON:0003075!6.13e-17!71;UBERON:0007284!6.13e-17!71;UBERON:0002791!2.84e-15!29;UBERON:0003528!2.84e-15!29;UBERON:0001893!2.84e-15!29;UBERON:0003056!3.49e-15!49;UBERON:0003080!4.79e-14!40;UBERON:0002780!1.39e-13!39;UBERON:0001890!1.39e-13!39;UBERON:0006240!1.39e-13!39;UBERON:0007811!6.83e-12!86;UBERON:0000956!1.24e-10!21;UBERON:0001869!1.24e-10!21;UBERON:0000203!1.24e-10!21;UBERON:0000153!2.30e-10!94;UBERON:0002619!1.45e-08!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.03e-30,54;UBERON:0001017,3.45e-29,73;UBERON:0001049,1.35e-28,52;UBERON:0005068,1.35e-28,52;UBERON:0006241,1.35e-28,52;UBERON:0007135,1.35e-28,52;UBERON:0001016,7.68e-28,75;UBERON:0004121,4.60e-27,95;UBERON:0000924,4.60e-27,95;UBERON:0006601,4.60e-27,95;UBERON:0010371,9.18e-27,73;UBERON:0002346,1.19e-26,64;UBERON:0003075,1.19e-26,64;UBERON:0007284,1.19e-26,64;UBERON:0002020,1.33e-25,34;UBERON:0000955,2.23e-24,47;UBERON:0006238,2.23e-24,47;UBERON:0002616,7.86e-24,46;UBERON:0003528,3.54e-21,29;UBERON:0002791,3.54e-21,29;UBERON:0001893,3.54e-21,29;UBERON:0003056,5.13e-21,49;UBERON:0003080,9.39e-21,40;UBERON:0002780,4.68e-20,39;UBERON:0001890,4.68e-20,39;UBERON:0006240,4.68e-20,39;UBERON:0010314,2.41e-19,92;UBERON:0000956,3.26e-15,21;UBERON:0001869,3.26e-15,21;UBERON:0000203,3.26e-15,21;UBERON:0002619,4.20e-12,17;UBERON:0000025,6.83e-10,114;UBERON:0004111,2.02e-09,122;UBERON:0003076,2.88e-08,12;UBERON:0003057,2.88e-08,12;UBERON:0002021,1.92e-07,10;UBERON:0000411,1.92e-07,10;UBERON:0001950,1.92e-07,10;UBERON:0002420,4.01e-07,8;UBERON:0007245,4.01e-07,8;UBERON:0010009,4.01e-07,8;UBERON:0010011,4.01e-07,8;UBERON:0000454,4.01e-07,8 | |||
|phase1_expression=2.40223270657191,0,0,0.30246421130683,1.00179145989269,0.503637815735669,0.233612640595526,0.774739940649458,0.140788722151667,0.234064526321993,0,0.239316476986009,0.513602189793617,0.524522414513984,0.333109761815663,0.404950534779652,0.699561878128147,0,0.274228867211478,0.42438965179803,0.850432901510698,0.397163804803541,0,0.639969691173627,0.22940928106717,0.57423196411502,1.29228598847722,0.215471232685889,0.950117097281869,0.504060259519861,0.886922042621219,0.635030673459631,0,0,0,0.498703936075477,0.204169356262369,0.418531630736908,0.7813353445238,0.523523743973798,0,0,0.485510353031154,0.629484089877886,0.506884656097573,0.734187008646726,3.12956537739216,1.30815093828268,1.97717564461025,2.13872888981712,2.65974201088189,1.43752564364972,0.167782606057736,0.725362142011344,0.672187598284928,1.02903774414379,1.14613375975503,0.515672092277442,2.22548106945558,3.1739458756322,3.1691570175309,1.69422266034566,0.889294796111139,0.899899717281399,0.988866362566974,0,0.299600110518405,1.15265491596466,2.48855069540346,2.29510095163874,2.73422449756797,3.99911378165325,2.65042249141936,2.08234358665422,2.01275489138296,3.67687514644008,1.10115880999389,3.57524546638526,5.22262213071228,3.29715719325485,3.38504281328916,7.29278718779464,4.4669279840221,3.93933827022176,4.27835093775068,2.35702868378934,2.13557521198654,3.16879057903011,0.757261933331841,0.529000920747499,0.289864488701678,0,0,0.539703191637817,0,1.34408066129201,0.140444420131752,1.1930122580464,0.779358013808606,0.70667914902068,1.69012103732017,0,2.54805239706646,0,1.08245520505607,0.760079596425296,0,0.79928715803342,0.517875767294343,0.29688427812965,0.693941307064543,0.304465478312141,0.691846491768175,0.904335843315735,0.470354828542819,0.753999547978053,0.741584903203122,0.144599356919912,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0.585561594023094,2.30391377494801,0.510914110417183,0.718890747035522,0,0.381210681219194,2.09706895166752,0.915001205637253,5.27748278874031,2.25971616249959,4.34716277461562,1.87009240103604,1.94689515681309,1.42575109390443,0.124406970610093,0.758168275301024,0.841767423545896,1.43132487258974,0.689706313300419,1.0803727788321,1.65775299619287,0.680364991513279,1.66547836370305,1.59292931751539,1.03481348295606,0.862271971731369,0.567318240503458,1.93546236580344,0.219195732427575,0,0.348252166522167,0.61734640922383,0.995171334092466,0.702213187313235,1.02939162845886,0.568326998791185,0.414251545071004,0.703578179943289,0.36012412292203,0.710234206755631,0,1.3884040159864,0.232533944750408,0.268273401399619,1.05088808130453,1.6455984991348,0.820837320395476,0.972825714550269,1.16959989940266,0.658650345873152,0.671032093801859,2.10289948564127,1.85228302282712,0,0,0.853153002140936,0.464473343720877,0.38660238396628,0.201683524623343,0,0.190225626112559,0.949058123089023,0.823494773620054,0.502670417600539,1.1937388322469,1.36474860983384,0,0.216138049874694,0.199141273254367,0.569003702859245,0.799739588268102,2.25415471346161,0,0.193952487167626,0.561086559122548,0.69560190836683,0.442830443938806,0.156998727841375,0.863780147452604,0,0.166845105716094,1.37591296579242,0.899448449539415,0.202860121388503,0.72353147925725,0,0.575392274901621,1.62135226775035,0.274561413188081,0,0,0.624075346229121,0,0.358794827043824,0.482443521363367,0,0.568474235311454,0.162964976442026,0.339490171550376,1.40814148973101,0.837531287209079,0.238043640886014,0.975668239288994,0.315270288212382,0.664394068946325,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0.54390568381871,0.491764273019036,0.551873492609465,3.53211297973142,2.57865710502847,0.983609672260053,0.504941854408746,0,0.780877488593277,0.646270193198397,0.955875191810208,0,0.566153061577665,0,0.584511715822624,0.395287777946524,1.60660658210904,0.283880170416537,0.890328018336276,0.651547837414304,0.659880491890142,1.32745138339963,0.242780636154981,0,0.565815239267694,1.18120757152309,1.22974059177571,0.258428293168221,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,1.08036656418786,1.29358683782755,0.214337035031592,1.41872186913819,0.535106452806212,0.493647061806363,1.522324745573,0.704015124191131,0.847328283455281,0.661585194164886,0.98931751764888,1.13025098687134,1.08563264870681,1.90995750405018,0.656563598980245,0.582961673259701,1.11255181206306,0,0.412773735926445,0.185194527369712,0.376736914009382,0.136694227721025,0.228778173206523,0.849892149969277,0.559805809294632,0.829199842826543,0.954670618015114,0.790839983952838,0.813277868507395,0.648032044930808,0.418176592028937,0.218362563746178,1.07891477107857,0.661227645802687,0,0.388844919875379,0,2.81846469342095,0.747582730219894,2.48187735685646,0.388902376688095,1.03327858782185,1.18269287843545,0.938857909166032,0.911430693907651,0.629156066554265,1.44950472495604,2.01621004380506,0.316011120628178,0.810900861160657,0.410843828659309,0.51968329191118,0.716106782669926,1.39076948346885,0.721172697119813,0.295379054349154,0.706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| ||
|short_description=p3@Glrx2 | |short_description=p3@Glrx2 | ||
}} | }} |
Latest revision as of 12:24, 26 September 2015
Short description: | p3@Glrx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Glrx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000050491, ENSMUST00000126514, ENSMUST00000148600_5end |
EntrezGene: | Glrx2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.47e-21 | 23 |
neuroblast (sensu Vertebrata) | 7.47e-21 | 23 |
ectodermal cell | 1.18e-15 | 44 |
neurectodermal cell | 1.18e-15 | 44 |
neural cell | 4.19e-15 | 43 |
neuron | 4.54e-13 | 33 |
neuronal stem cell | 4.54e-13 | 33 |
neuroblast | 4.54e-13 | 33 |
electrically signaling cell | 4.54e-13 | 33 |
electrically responsive cell | 3.52e-11 | 39 |
electrically active cell | 3.52e-11 | 39 |
embryonic cell | 4.75e-09 | 70 |