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FFCP PHASE1:Mm9::chrX:7524945..7524958,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=15185
|EntrezGene=15185
|HGNC=
|HGNC=
|MCL_coexpression_id=3762
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=5bp_to_ENSMUST00000137499_5end
|association_with_transcript=5bp_to_ENSMUST00000137499_5end
|cluster_id=chrX:7524945..7524958,-
|description=CAGE_peak_2_at_Hdac6_5end
|description=CAGE_peak_2_at_Hdac6_5end
|id=chrX:7524945..7524958,-
|id=chrX:7524945..7524958,-
|ontology_enrichment_celltype=CL:0000117!2.75e-08!23;CL:0000337!2.75e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.96e-09,23;CL:0000337,1.96e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!6.02e-11!52;UBERON:0005068!6.02e-11!52;UBERON:0006241!6.02e-11!52;UBERON:0007135!6.02e-11!52;UBERON:0000033!6.33e-10!63;UBERON:0001017!8.34e-10!73;UBERON:0005743!8.34e-10!73;UBERON:0002346!8.71e-10!71;UBERON:0003075!8.71e-10!71;UBERON:0007284!8.71e-10!71;UBERON:0000073!2.66e-09!75;UBERON:0001016!2.66e-09!75;UBERON:0003056!3.62e-09!49;UBERON:0000955!4.14e-09!50;UBERON:0006238!4.14e-09!50;UBERON:0002616!1.27e-08!49;UBERON:0004121!2.38e-08!102;UBERON:0000924!2.38e-08!102;UBERON:0006601!2.38e-08!102;UBERON:0003080!2.76e-08!40;UBERON:0002780!6.15e-08!39;UBERON:0001890!6.15e-08!39;UBERON:0006240!6.15e-08!39;UBERON:0000991!1.99e-07!18;UBERON:0005564!1.99e-07!18;UBERON:0002020!2.12e-07!34;UBERON:0003135!3.82e-07!15;UBERON:0004176!6.41e-07!17;UBERON:0009196!6.41e-07!17;UBERON:0009117!6.41e-07!17;UBERON:0000489!9.26e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.34e-09,54;UBERON:0001049,1.63e-09,52;UBERON:0005068,1.63e-09,52;UBERON:0006241,1.63e-09,52;UBERON:0007135,1.63e-09,52;UBERON:0010314,2.09e-09,92;UBERON:0003135,3.04e-09,15;UBERON:0000991,4.23e-09,18;UBERON:0005564,4.23e-09,18;UBERON:0002346,5.23e-09,64;UBERON:0003075,5.23e-09,64;UBERON:0007284,5.23e-09,64;UBERON:0000489,1.41e-08,21;UBERON:0003133,1.79e-08,24;UBERON:0004176,1.87e-08,17;UBERON:0009196,1.87e-08,17;UBERON:0009117,1.87e-08,17;UBERON:0000473,2.12e-08,14;UBERON:0003101,2.66e-08,16;UBERON:0000079,2.66e-08,16;UBERON:0010371,5.17e-08,73;UBERON:0001017,6.72e-08,73;UBERON:0000955,1.19e-07,47;UBERON:0006238,1.19e-07,47;UBERON:0001016,2.58e-07,75;UBERON:0005156,2.94e-07,26;UBERON:0000990,2.94e-07,26;UBERON:0002616,4.02e-07,46;UBERON:0003056,4.10e-07,49;UBERON:0003103,4.61e-07,43
|phase1_expression=1.60148847104794,0,0,0,0,0.671517087647559,0,0.258246646883153,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0.174840804837995,0,0,0,0,0.137114433605739,0,1.7008658030214,0.198581902401771,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.760093677825496,0,0.443461021310609,0,1.23012957516914,0,0.577703239502549,0.332469290716985,0.204169356262369,0,0,0,0,0.683045484958446,0.485510353031154,0.251793635951155,0.202753862439029,0.550640256485045,0,0.872100625521786,1.09843091367236,0.388859798148567,0.979904951377538,0,0.838913030288682,0.725362142011344,0,0.257259436035947,0.573066879877513,0,5.66486090406874,1.5869729378161,2.53532561402472,1.35537812827653,0,0,0,0,0.299600110518405,1.15265491596466,2.28117147078651,1.75507719831198,0.841299845405528,3.14216082844184,1.98781686856452,2.20483438586917,1.15014565221884,0.919218786610021,0,1.40456071893706,1.68967186581868,3.16527090552465,3.11057988248193,3.64639359389732,2.79182999001381,1.12552522006336,2.44477196442896,1.47314292736834,1.99320353118744,2.60959224155421,0.151452386666368,0.755715601067855,0,0.860423876981386,0,0,0,0,0.280888840263504,0.170430322578058,0.519572009205738,0.70667914902068,1.83096445709685,0,0,0,0,0.506719730950197,1.01104889002957,0.34255163915718,0.258937883647172,0.445326417194474,1.38788261412909,0.608930956624282,1.38369298353635,0.301445281105245,0.470354828542819,0.502666365318702,0.494389935468748,0.578397427679647,0,0.970601099684455,0.441683036920787,0,0,1.46390398505774,1.8850203613211,0.510914110417183,0.359445373517761,0,0.381210681219194,1.79748767285787,1.37250180845588,2.63874139437015,1.21677024134594,1.79000820131231,1.45451631191692,1.78465389374533,1.52759045775474,1.7416975885413,7.32895999457657,0.631325567659422,1.95180664444056,2.29902104433473,0.360124259610698,1.05493372485001,1.83698547708585,1.0249097622788,1.59292931751539,0.776110112217047,0.646703978798527,1.32374256117473,2.28736461413134,1.09597866213787,2.22437799380478,1.0447564995665,0.205782136407943,2.38841120182192,0,0,0.568326998791185,1.24275463521301,1.64168241986767,1.62055855314913,0.710234206755631,2.16440654922144,1.07986979021165,2.32533944750408,2.68273401399619,1.28441876603886,1.97471819896177,1.31333971263276,1.37816976227955,0.877199924551994,0.878200461164203,0.805238512562231,0.630869845692382,2.36680608472354,0,0.264450566663544,2.13288250535234,1.39342003116263,0.644337306610467,0.403367049246685,0.22237804384487,0,0,0.329397909448022,0.251335208800269,0,0.58489226135736,0,0,0.398282546508734,1.13800740571849,3.54170389090159,3.38123207019241,2.44381593414377,2.90928730751439,2.24434623649019,1.51767689098217,1.47610147979602,1.41298855057237,1.23397163921801,0,0.333690211432188,1.37591296579242,0.899448449539415,0.608580364165509,0.482354319504834,1.2731292589071,1.43848068725405,0.324270453550071,0.549122826376163,0,1.11642284300551,0,0.505157755894224,0.179397413521912,0.482443521363367,0,1.13694847062291,0.651859905768103,1.01847051465113,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0.630540576424764,0.44292937929755,1.11618338060241,0.327726629431476,0.172684981865896,0.144649058581512,1.50791283939272,0,1.47529281905711,0.275936746304732,1.9266070798535,1.52375192569864,0.983609672260053,0.757412781613119,0.315508219416257,0.390438744296638,0.215423397732799,0.955875191810208,0.445597348164788,0.849229592366497,0,0.876767573733936,0.790575555893047,2.89189184779626,0.709700426041343,1.78065603667255,1.95464351224291,0.824850614862677,1.32745138339963,1.45668381692989,1.81394134178851,1.50884063804718,0.590603785761546,1.84461088766356,0.516856586336442,1.09060118843252,1.06949213515416,0,0,0,1.02131881726136,3.06103859853227,2.32845630808958,1.71469628025274,1.41872186913819,0.891844088010353,1.48094118541909,1.522324745573,2.11204537257339,1.48282449604674,0.220528398054962,0.49465875882444,0.161464426695906,0.542816324353403,0.596861720015682,0.492422699235184,0.582961673259701,1.11255181206306,0.170870880797853,1.03193433981611,0.555583582109135,0.376736914009382,0.136694227721025,0,0.849892149969277,0.139951452323658,0.829199842826543,0,1.42351197111511,1.01659733563424,0.86404272657441,0.836353184057875,0.218362563746178,0.809186078308924,0.578574190077352,0.523511883968059,0.129614973291793,0.621339313086926,1.69107881605257,1.94371509857172,1.48912641411388,2.91676782516071,2.45403664607689,2.36538575687089,2.46450201156083,3.51551839078665,9.22762230946256,3.38217769156408,4.32045009386798,0.316011120628178,1.41907650703115,1.54066435747241,0.77952493786677,0.716106782669926,0.596044064343795,0.120195449519969,0.147689527174577,0.504832249740738,0.685861259894999,0.201652370273681,0.292373642219257,0.0962118416403295,0.701261413089414,0,3.99574716073316,5.65197296639697,2.85403847818933,0.386379188064381,0,0.549454872801795,0,0,1.12950368523413,0.920650473014354,1.14579102687879,1.03111909406213,0.685082519770642,0.755393897389701,2.02506750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|phase1_expression=1.60148847104794,0,0,0,0,0.671517087647559,0,0.258246646883153,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0.174840804837995,0,0,0,0,0.137114433605739,0,1.7008658030214,0.198581902401771,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.760093677825496,0,0.443461021310609,0,1.23012957516914,0,0.577703239502549,0.332469290716985,0.204169356262369,0,0,0,0,0.683045484958446,0.485510353031154,0.251793635951155,0.202753862439029,0.550640256485045,0,0.872100625521786,1.09843091367236,0.388859798148567,0.979904951377538,0,0.838913030288682,0.725362142011344,0,0.257259436035947,0.573066879877513,0,5.66486090406874,1.5869729378161,2.53532561402472,1.35537812827653,0,0,0,0,0.299600110518405,1.15265491596466,2.28117147078651,1.75507719831198,0.841299845405528,3.14216082844184,1.98781686856452,2.20483438586917,1.15014565221884,0.919218786610021,0,1.40456071893706,1.68967186581868,3.16527090552465,3.11057988248193,3.64639359389732,2.79182999001381,1.12552522006336,2.44477196442896,1.47314292736834,1.99320353118744,2.60959224155421,0.151452386666368,0.755715601067855,0,0.860423876981386,0,0,0,0,0.280888840263504,0.170430322578058,0.519572009205738,0.70667914902068,1.83096445709685,0,0,0,0,0.506719730950197,1.01104889002957,0.34255163915718,0.258937883647172,0.445326417194474,1.38788261412909,0.608930956624282,1.38369298353635,0.301445281105245,0.470354828542819,0.502666365318702,0.494389935468748,0.578397427679647,0,0.970601099684455,0.441683036920787,0,0,1.46390398505774,1.8850203613211,0.510914110417183,0.359445373517761,0,0.381210681219194,1.79748767285787,1.37250180845588,2.63874139437015,1.21677024134594,1.79000820131231,1.45451631191692,1.78465389374533,1.52759045775474,1.7416975885413,7.32895999457657,0.631325567659422,1.95180664444056,2.29902104433473,0.360124259610698,1.05493372485001,1.83698547708585,1.0249097622788,1.59292931751539,0.776110112217047,0.646703978798527,1.32374256117473,2.28736461413134,1.09597866213787,2.22437799380478,1.0447564995665,0.205782136407943,2.38841120182192,0,0,0.568326998791185,1.24275463521301,1.64168241986767,1.62055855314913,0.710234206755631,2.16440654922144,1.07986979021165,2.32533944750408,2.68273401399619,1.28441876603886,1.97471819896177,1.31333971263276,1.37816976227955,0.877199924551994,0.878200461164203,0.805238512562231,0.630869845692382,2.36680608472354,0,0.264450566663544,2.13288250535234,1.39342003116263,0.644337306610467,0.403367049246685,0.22237804384487,0,0,0.329397909448022,0.251335208800269,0,0.58489226135736,0,0,0.398282546508734,1.13800740571849,3.54170389090159,3.38123207019241,2.44381593414377,2.90928730751439,2.24434623649019,1.51767689098217,1.47610147979602,1.41298855057237,1.23397163921801,0,0.333690211432188,1.37591296579242,0.899448449539415,0.608580364165509,0.482354319504834,1.2731292589071,1.43848068725405,0.324270453550071,0.549122826376163,0,1.11642284300551,0,0.505157755894224,0.179397413521912,0.482443521363367,0,1.13694847062291,0.651859905768103,1.01847051465113,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0.630540576424764,0.44292937929755,1.11618338060241,0.327726629431476,0.172684981865896,0.144649058581512,1.50791283939272,0,1.47529281905711,0.275936746304732,1.9266070798535,1.52375192569864,0.983609672260053,0.757412781613119,0.315508219416257,0.390438744296638,0.215423397732799,0.955875191810208,0.445597348164788,0.849229592366497,0,0.876767573733936,0.790575555893047,2.89189184779626,0.709700426041343,1.78065603667255,1.95464351224291,0.824850614862677,1.32745138339963,1.45668381692989,1.81394134178851,1.50884063804718,0.590603785761546,1.84461088766356,0.516856586336442,1.09060118843252,1.06949213515416,0,0,0,1.02131881726136,3.06103859853227,2.32845630808958,1.71469628025274,1.41872186913819,0.891844088010353,1.48094118541909,1.522324745573,2.11204537257339,1.48282449604674,0.220528398054962,0.49465875882444,0.161464426695906,0.542816324353403,0.596861720015682,0.492422699235184,0.582961673259701,1.11255181206306,0.170870880797853,1.03193433981611,0.555583582109135,0.376736914009382,0.136694227721025,0,0.849892149969277,0.139951452323658,0.829199842826543,0,1.42351197111511,1.01659733563424,0.86404272657441,0.836353184057875,0.218362563746178,0.809186078308924,0.578574190077352,0.523511883968059,0.129614973291793,0.621339313086926,1.69107881605257,1.94371509857172,1.48912641411388,2.91676782516071,2.45403664607689,2.36538575687089,2.46450201156083,3.51551839078665,9.22762230946256,3.38217769156408,4.32045009386798,0.316011120628178,1.41907650703115,1.54066435747241,0.77952493786677,0.716106782669926,0.596044064343795,0.120195449519969,0.147689527174577,0.504832249740738,0.685861259894999,0.201652370273681,0.292373642219257,0.0962118416403295,0.701261413089414,0,3.99574716073316,5.65197296639697,2.85403847818933,0.386379188064381,0,0.549454872801795,0,0,1.12950368523413,0.920650473014354,1.14579102687879,1.03111909406213,0.685082519770642,0.755393897389701,2.02506750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|short_description=p2@Hdac6
|short_description=p2@Hdac6
}}
}}

Latest revision as of 00:36, 2 October 2015

Short description:p2@Hdac6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Hdac6_5end
Coexpression cluster:MCL_coexpression_mm9:3762
Association with transcript: 5bp_to_ENSMUST00000137499_5end
EntrezGene:Hdac6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Hdac6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.76
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B27.33
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.84
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G11.38
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F83.54
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C72.91
kidney, neonate N00.CNhs11214.646-21G72.24
kidney, neonate N10.CNhs11206.758-6D51.52
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I43.52
testis, neonate N10.CNhs11204.763-44D99.23
testis, neonate N20.CNhs11110.839-18H33.38
testis, neonate N30.CNhs11130.1391-42E24.32
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.65
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.96e-0923
neuroblast (sensu Vertebrata)1.96e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.34e-0954
neural tube1.63e-0952
neural rod1.63e-0952
future spinal cord1.63e-0952
neural keel1.63e-0952
structure with developmental contribution from neural crest2.09e-0992
male reproductive organ3.04e-0915
gonad4.23e-0918
gonad primordium4.23e-0918
neurectoderm5.23e-0964
neural plate5.23e-0964
presumptive neural plate5.23e-0964
cavitated compound organ1.41e-0821
reproductive organ1.79e-0824
external genitalia1.87e-0817
indifferent external genitalia1.87e-0817
indifferent gonad1.87e-0817
testis2.12e-0814
male organism2.66e-0816
male reproductive system2.66e-0816
ecto-epithelium5.17e-0873
central nervous system6.72e-0873
brain1.19e-0747
future brain1.19e-0747
nervous system2.58e-0775
reproductive structure2.94e-0726
reproductive system2.94e-0726
regional part of brain4.02e-0746
pre-chordal neural plate4.10e-0749
compound organ4.61e-0743
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