FFCP PHASE1:Mm9::chr8:106966901..106966925,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=234663 | |EntrezGene=234663 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PDL0 | |UniProt=Q6PDL0 | ||
|association_with_transcript=21bp_to_ENSMUST00000041769,NM_001013380,uc009nao.2,uc009nap.2,uc012giy.1_5end | |association_with_transcript=21bp_to_ENSMUST00000041769,NM_001013380,uc009nao.2,uc009nap.2,uc012giy.1_5end | ||
|cluster_id=chr8:106966901..106966925,- | |||
|description=CAGE_peak_2_at_Dync1li2_5end | |description=CAGE_peak_2_at_Dync1li2_5end | ||
|id=chr8:106966901..106966925,- | |id=chr8:106966901..106966925,- | ||
|ontology_enrichment_celltype=CL:0000393!3.37e-16!39;CL:0000211!3.37e-16!39;CL:0000540!4.77e-16!33;CL:0000047!4.77e-16!33;CL:0000031!4.77e-16!33;CL:0000404!4.77e-16!33;CL:0000221!2.73e-13!44;CL:0000133!2.73e-13!44;CL:0002319!4.94e-13!43;CL:0000055!8.37e-13!50;CL:0000117!1.46e-12!23;CL:0000337!1.46e-12!23;CL:0002321!1.07e-09!70;CL:0000220!1.07e-09!70 | |ontology_enrichment_celltype=CL:0000393!3.37e-16!39;CL:0000211!3.37e-16!39;CL:0000540!4.77e-16!33;CL:0000047!4.77e-16!33;CL:0000031!4.77e-16!33;CL:0000404!4.77e-16!33;CL:0000221!2.73e-13!44;CL:0000133!2.73e-13!44;CL:0002319!4.94e-13!43;CL:0000055!8.37e-13!50;CL:0000117!1.46e-12!23;CL:0000337!1.46e-12!23;CL:0002321!1.07e-09!70;CL:0000220!1.07e-09!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,3.37e-16,39;CL:0000211,3.37e-16,39;CL:0000540,4.77e-16,33;CL:0000047,4.77e-16,33;CL:0000031,4.77e-16,33;CL:0000404,4.77e-16,33;CL:0000221,2.73e-13,44;CL:0000133,2.73e-13,44;CL:0002319,4.94e-13,43;CL:0000117,1.46e-12,23;CL:0000337,1.46e-12,23;CL:0002321,1.07e-09,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.29e-26!102;UBERON:0000924!1.29e-26!102;UBERON:0006601!1.29e-26!102;UBERON:0000073!1.24e-24!75;UBERON:0001016!1.24e-24!75;UBERON:0001017!3.36e-24!73;UBERON:0005743!3.36e-24!73;UBERON:0000033!1.14e-21!63;UBERON:0002346!2.46e-21!71;UBERON:0003075!2.46e-21!71;UBERON:0007284!2.46e-21!71;UBERON:0001049!4.22e-17!52;UBERON:0005068!4.22e-17!52;UBERON:0006241!4.22e-17!52;UBERON:0007135!4.22e-17!52;UBERON:0000955!6.90e-17!50;UBERON:0006238!6.90e-17!50;UBERON:0003056!8.11e-17!49;UBERON:0002616!1.81e-16!49;UBERON:0002020!4.13e-15!34;UBERON:0002791!2.13e-13!29;UBERON:0003528!2.13e-13!29;UBERON:0001893!2.13e-13!29;UBERON:0003080!3.75e-13!40;UBERON:0002780!1.53e-12!39;UBERON:0001890!1.53e-12!39;UBERON:0006240!1.53e-12!39;UBERON:0007811!8.07e-10!86;UBERON:0000956!9.68e-10!21;UBERON:0001869!9.68e-10!21;UBERON:0000203!9.68e-10!21;UBERON:0004111!1.31e-08!122;UBERON:0000153!2.12e-08!94;UBERON:0000025!9.67e-08!114;UBERON:0002619!1.13e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.31e-26,95;UBERON:0000924,1.31e-26,95;UBERON:0006601,1.31e-26,95;UBERON:0001016,1.24e-24,75;UBERON:0001017,3.36e-24,73;UBERON:0010314,9.17e-23,92;UBERON:0002346,9.48e-22,64;UBERON:0003075,9.48e-22,64;UBERON:0007284,9.48e-22,64;UBERON:0010371,9.16e-20,73;UBERON:0000073,2.40e-18,54;UBERON:0001049,4.22e-17,52;UBERON:0005068,4.22e-17,52;UBERON:0006241,4.22e-17,52;UBERON:0007135,4.22e-17,52;UBERON:0003056,8.11e-17,49;UBERON:0002020,4.13e-15,34;UBERON:0000955,5.41e-15,47;UBERON:0006238,5.41e-15,47;UBERON:0002616,1.38e-14,46;UBERON:0003528,2.13e-13,29;UBERON:0002791,2.13e-13,29;UBERON:0001893,2.13e-13,29;UBERON:0003080,3.75e-13,40;UBERON:0002780,1.53e-12,39;UBERON:0001890,1.53e-12,39;UBERON:0006240,1.53e-12,39;UBERON:0000956,9.68e-10,21;UBERON:0001869,9.68e-10,21;UBERON:0000203,9.68e-10,21;UBERON:0004111,1.31e-08,122;UBERON:0000025,9.69e-08,114;UBERON:0002619,1.13e-07,17 | |||
|phase1_expression=8.80818659076367,4.88565570695105,11.3749809847384,11.1911758183527,10.5188103288733,9.23335995515394,8.87728034262997,2.06597317506522,2.956563165185,1.87251621057595,1.88339765048055,1.67521533890206,1.54080656938085,2.62261207256992,3.66420737997229,5.06188168474565,5.59649502502517,4.10100814965709,3.56497527374921,4.66828616977833,9.69493507722195,4.76596565764249,3.39559725880616,6.23970448894286,4.81759490241057,5.16808767703518,10.3382879078178,6.24866574789078,1.71021077510736,4.78857246543868,2.66076612786366,2.54012269383853,3.69038872550742,0,6.06588401477677,5.15327400611326,5.9209113316087,3.76678467663217,2.3440060335714,2.09409497589519,4.70585190424811,8.19654581950135,2.42755176515577,11.4566104357775,10.5432008468295,9.72797786456912,2.34717403304412,8.06693078607652,5.93152693383074,8.36048566019419,6.99932108126813,8.62515386189829,1.67782606057736,4.35217285206807,1.68046899571232,6.94600477297057,6.87680255853016,11.3447860301037,19.4223802425214,19.5726662330652,17.1134478946668,6.77689064138264,5.33576877666684,5.84934816232909,2.96659908770092,7.104801149461,6.5912024314049,6.14749288514487,17.7309237047497,20.3858966880853,22.7150958259493,12.8542942981712,10.8225585066291,16.046294697159,18.3064849644831,21.1420320920305,23.1243350098716,28.4742763929969,35.4831091821922,25.4540535319274,23.0548861878072,23.4411016750542,28.4766658981409,18.0084035210138,27.0452898564954,12.9636577608414,11.2473627831291,18.0807462450542,8.78423842664935,11.260162455911,7.8263411949453,4.30211938490693,2.719885334831,4.31762553310254,1.29955283489534,5.37632264516803,6.46044332606059,4.94247935476367,4.67614808285164,5.65343319216544,10.563256483251,6.41632387071589,20.3844191765317,14.2213340630666,4.97929394325792,6.33399663687746,4.54972000513305,4.33898742932428,4.40194402200192,9.64873903921361,5.72501578328248,9.43842982767638,8.76338889573022,10.2491395575783,8.70156432804216,5.6549966098354,2.22475470960936,7.66376591675532,6.19227386364912,5.82360659810673,9.49618529379692,10.1823803158397,1.86391761218122,31.3275452802355,31.6264527288317,6.38642638021478,6.11057134980193,5.39912457894067,6.35351135365323,28.1606402081067,20.5875271268382,7.16229807043327,23.4662832259573,29.6629930503183,26.3890816590641,24.3361894601636,3.97173519016234,6.59356944233493,2.0217820674694,10.5220927943237,14.1831282829347,14.9436367881757,13.6847218652065,14.7690721479001,17.6894897793452,26.3914263786791,21.2702914750584,9.57202471734358,6.68260778091811,7.94245536704841,6.33424046990216,5.47989331068937,5.83899223373756,5.57203466435466,7.61393904709391,9.35461054046918,4.91549231119264,3.08817488537658,3.40996199274711,9.11353399156208,8.67746421930056,9.7233513188948,11.6004920436753,8.65762619688577,8.4846912088058,9.53389173476672,7.77992864058896,6.07179780309281,6.91151369636618,9.35754545250843,8.431156192769,9.21059920779594,9.22110484222413,9.5286557319864,14.7202963994889,12.1427442607556,4.62586296177317,5.55346189993443,10.2378360256912,10.2184135618593,6.31450560478257,5.84882221407693,6.0042071838115,6.27744566171445,5.21981967698963,3.45867804920423,5.52937459360593,5.57078121715222,6.23885078781184,5.39291645192533,4.97117514711797,8.76221602319216,4.55202962287396,9.48262654660749,4.50830942692322,8.5533557695032,6.7883370508669,6.24208797023835,6.38689024954999,7.52811754695971,9.41992367048249,5.67626954040282,6.22550516883013,3.33690211432188,2.94838492669805,3.14806957338795,2.63718157805054,4.10001171579109,5.60176873919124,4.31544206176216,1.62135226775035,1.64736847912849,5.75072826109418,0.744281895337007,5.30464044294753,4.79899868099512,3.58794827043824,5.78932225636041,12.7479701214957,8.52711352967181,9.28900365719548,8.48725428875941,8.91822943496308,7.53778158488171,5.71304738126433,6.43941037930736,9.77337893458384,8.63712289630222,11.0023790373666,8.84861899464985,11.3972088031491,11.4272756279394,3.01582567878545,6.52686820582452,7.37646409528554,6.34654516500885,36.9266356971921,38.4454332022426,3.11476396215683,16.1581393410799,11.3582958989852,8.19921363022941,16.8030250231583,19.1175038362042,19.8290819933331,21.5138163399513,17.4068601720205,19.2888866221466,19.7643888973262,14.4594592389813,7.09700426041343,4.80777129901589,5.21238269931443,7.25868541079156,5.30980553359851,6.06951590387454,8.46505959501303,4.71512699389745,5.02013217897314,3.99665692327106,4.39328098385976,3.99887102425256,4.9909632973861,6.63677191665214,8.4334886859999,15.470331487228,5.10659408630682,12.2441543941291,8.5376731296618,11.574199891706,6.38424841112185,7.13475270408282,8.22745103010605,4.26250928760439,2.11204537257339,3.1774810629573,5.73373834942901,6.92522262354216,5.00539722757307,6.09160541774374,6.44610657616937,8.042904087508,5.24665505933731,37.6413363081335,4.78438466233988,4.54051109519089,5.74103034846106,4.33247451110789,6.56132293060921,3.43167259809784,7.30907248973578,5.73800954526998,7.04819866402561,7.63736494412091,7.43389584915668,5.692945079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| |phase1_expression=8.80818659076367,4.88565570695105,11.3749809847384,11.1911758183527,10.5188103288733,9.23335995515394,8.87728034262997,2.06597317506522,2.956563165185,1.87251621057595,1.88339765048055,1.67521533890206,1.54080656938085,2.62261207256992,3.66420737997229,5.06188168474565,5.59649502502517,4.10100814965709,3.56497527374921,4.66828616977833,9.69493507722195,4.76596565764249,3.39559725880616,6.23970448894286,4.81759490241057,5.16808767703518,10.3382879078178,6.24866574789078,1.71021077510736,4.78857246543868,2.66076612786366,2.54012269383853,3.69038872550742,0,6.06588401477677,5.15327400611326,5.9209113316087,3.76678467663217,2.3440060335714,2.09409497589519,4.70585190424811,8.19654581950135,2.42755176515577,11.4566104357775,10.5432008468295,9.72797786456912,2.34717403304412,8.06693078607652,5.93152693383074,8.36048566019419,6.99932108126813,8.62515386189829,1.67782606057736,4.35217285206807,1.68046899571232,6.94600477297057,6.87680255853016,11.3447860301037,19.4223802425214,19.5726662330652,17.1134478946668,6.77689064138264,5.33576877666684,5.84934816232909,2.96659908770092,7.104801149461,6.5912024314049,6.14749288514487,17.7309237047497,20.3858966880853,22.7150958259493,12.8542942981712,10.8225585066291,16.046294697159,18.3064849644831,21.1420320920305,23.1243350098716,28.4742763929969,35.4831091821922,25.4540535319274,23.0548861878072,23.4411016750542,28.4766658981409,18.0084035210138,27.0452898564954,12.9636577608414,11.2473627831291,18.0807462450542,8.78423842664935,11.260162455911,7.8263411949453,4.30211938490693,2.719885334831,4.31762553310254,1.29955283489534,5.37632264516803,6.46044332606059,4.94247935476367,4.67614808285164,5.65343319216544,10.563256483251,6.41632387071589,20.3844191765317,14.2213340630666,4.97929394325792,6.33399663687746,4.54972000513305,4.33898742932428,4.40194402200192,9.64873903921361,5.72501578328248,9.43842982767638,8.76338889573022,10.2491395575783,8.70156432804216,5.6549966098354,2.22475470960936,7.66376591675532,6.19227386364912,5.82360659810673,9.49618529379692,10.1823803158397,1.86391761218122,31.3275452802355,31.6264527288317,6.38642638021478,6.11057134980193,5.39912457894067,6.35351135365323,28.1606402081067,20.5875271268382,7.16229807043327,23.4662832259573,29.6629930503183,26.3890816590641,24.3361894601636,3.97173519016234,6.59356944233493,2.0217820674694,10.5220927943237,14.1831282829347,14.9436367881757,13.6847218652065,14.7690721479001,17.6894897793452,26.3914263786791,21.2702914750584,9.57202471734358,6.68260778091811,7.94245536704841,6.33424046990216,5.47989331068937,5.83899223373756,5.57203466435466,7.61393904709391,9.35461054046918,4.91549231119264,3.08817488537658,3.40996199274711,9.11353399156208,8.67746421930056,9.7233513188948,11.6004920436753,8.65762619688577,8.4846912088058,9.53389173476672,7.77992864058896,6.07179780309281,6.91151369636618,9.35754545250843,8.431156192769,9.21059920779594,9.22110484222413,9.5286557319864,14.7202963994889,12.1427442607556,4.62586296177317,5.55346189993443,10.2378360256912,10.2184135618593,6.31450560478257,5.84882221407693,6.0042071838115,6.27744566171445,5.21981967698963,3.45867804920423,5.52937459360593,5.57078121715222,6.23885078781184,5.39291645192533,4.97117514711797,8.76221602319216,4.55202962287396,9.48262654660749,4.50830942692322,8.5533557695032,6.7883370508669,6.24208797023835,6.38689024954999,7.52811754695971,9.41992367048249,5.67626954040282,6.22550516883013,3.33690211432188,2.94838492669805,3.14806957338795,2.63718157805054,4.10001171579109,5.60176873919124,4.31544206176216,1.62135226775035,1.64736847912849,5.75072826109418,0.744281895337007,5.30464044294753,4.79899868099512,3.58794827043824,5.78932225636041,12.7479701214957,8.52711352967181,9.28900365719548,8.48725428875941,8.91822943496308,7.53778158488171,5.71304738126433,6.43941037930736,9.77337893458384,8.63712289630222,11.0023790373666,8.84861899464985,11.3972088031491,11.4272756279394,3.01582567878545,6.52686820582452,7.37646409528554,6.34654516500885,36.9266356971921,38.4454332022426,3.11476396215683,16.1581393410799,11.3582958989852,8.19921363022941,16.8030250231583,19.1175038362042,19.8290819933331,21.5138163399513,17.4068601720205,19.2888866221466,19.7643888973262,14.4594592389813,7.09700426041343,4.80777129901589,5.21238269931443,7.25868541079156,5.30980553359851,6.06951590387454,8.46505959501303,4.71512699389745,5.02013217897314,3.99665692327106,4.39328098385976,3.99887102425256,4.9909632973861,6.63677191665214,8.4334886859999,15.470331487228,5.10659408630682,12.2441543941291,8.5376731296618,11.574199891706,6.38424841112185,7.13475270408282,8.22745103010605,4.26250928760439,2.11204537257339,3.1774810629573,5.73373834942901,6.92522262354216,5.00539722757307,6.09160541774374,6.44610657616937,8.042904087508,5.24665505933731,37.6413363081335,4.78438466233988,4.54051109519089,5.74103034846106,4.33247451110789,6.56132293060921,3.43167259809784,7.30907248973578,5.73800954526998,7.04819866402561,7.63736494412091,7.43389584915668,5.692945079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| ||
|short_description=p2@Dync1li2 | |short_description=p2@Dync1li2 | ||
}} | }} |
Latest revision as of 06:46, 27 September 2015
Short description: | p2@Dync1li2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dync1li2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 21bp_to_ENSMUST00000041769, NM_001013380, uc009nao.2, uc009nap.2, uc012giy.1_5end |
EntrezGene: | Dync1li2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 3.37e-16 | 39 |
electrically active cell | 3.37e-16 | 39 |
neuron | 4.77e-16 | 33 |
neuronal stem cell | 4.77e-16 | 33 |
neuroblast | 4.77e-16 | 33 |
electrically signaling cell | 4.77e-16 | 33 |
ectodermal cell | 2.73e-13 | 44 |
neurectodermal cell | 2.73e-13 | 44 |
neural cell | 4.94e-13 | 43 |
CNS neuron (sensu Vertebrata) | 1.46e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.46e-12 | 23 |
embryonic cell | 1.07e-09 | 70 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.31e-26 | 95 |
ectoderm | 1.31e-26 | 95 |
presumptive ectoderm | 1.31e-26 | 95 |
nervous system | 1.24e-24 | 75 |
central nervous system | 3.36e-24 | 73 |
structure with developmental contribution from neural crest | 9.17e-23 | 92 |
neurectoderm | 9.48e-22 | 64 |
neural plate | 9.48e-22 | 64 |
presumptive neural plate | 9.48e-22 | 64 |
ecto-epithelium | 9.16e-20 | 73 |
regional part of nervous system | 2.40e-18 | 54 |
neural tube | 4.22e-17 | 52 |
neural rod | 4.22e-17 | 52 |
future spinal cord | 4.22e-17 | 52 |
neural keel | 4.22e-17 | 52 |
pre-chordal neural plate | 8.11e-17 | 49 |
gray matter | 4.13e-15 | 34 |
brain | 5.41e-15 | 47 |
future brain | 5.41e-15 | 47 |
regional part of brain | 1.38e-14 | 46 |
brain grey matter | 2.13e-13 | 29 |
regional part of telencephalon | 2.13e-13 | 29 |
telencephalon | 2.13e-13 | 29 |
anterior neural tube | 3.75e-13 | 40 |
regional part of forebrain | 1.53e-12 | 39 |
forebrain | 1.53e-12 | 39 |
future forebrain | 1.53e-12 | 39 |
cerebral cortex | 9.68e-10 | 21 |
cerebral hemisphere | 9.68e-10 | 21 |
pallium | 9.68e-10 | 21 |
anatomical conduit | 1.31e-08 | 122 |
tube | 9.69e-08 | 114 |
regional part of cerebral cortex | 1.13e-07 | 17 |