FFCP PHASE1:Mm9::chr8:106966844..106966855,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=234663 | |EntrezGene=234663 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PDL0 | |UniProt=Q6PDL0 | ||
|association_with_transcript=91bp_to_ENSMUST00000041769,NM_001013380,uc009nao.2,uc009nap.2,uc012giy.1_5end | |association_with_transcript=91bp_to_ENSMUST00000041769,NM_001013380,uc009nao.2,uc009nap.2,uc012giy.1_5end | ||
|cluster_id=chr8:106966844..106966855,- | |||
|description=CAGE_peak_3_at_Dync1li2_5end | |description=CAGE_peak_3_at_Dync1li2_5end | ||
|id=chr8:106966844..106966855,- | |id=chr8:106966844..106966855,- | ||
|ontology_enrichment_celltype=CL:0000055!2.21e-13!50;CL:0002321!1.64e-11!70;CL:0000220!1.64e-11!70;CL:0002319!2.90e-11!43;CL:0000393!4.25e-11!39;CL:0000211!4.25e-11!39;CL:0000221!4.53e-11!44;CL:0000133!4.53e-11!44;CL:0000540!1.72e-09!33;CL:0000047!1.72e-09!33;CL:0000031!1.72e-09!33;CL:0000404!1.72e-09!33 | |ontology_enrichment_celltype=CL:0000055!2.21e-13!50;CL:0002321!1.64e-11!70;CL:0000220!1.64e-11!70;CL:0002319!2.90e-11!43;CL:0000393!4.25e-11!39;CL:0000211!4.25e-11!39;CL:0000221!4.53e-11!44;CL:0000133!4.53e-11!44;CL:0000540!1.72e-09!33;CL:0000047!1.72e-09!33;CL:0000031!1.72e-09!33;CL:0000404!1.72e-09!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.24e-13,70;CL:0002319,7.25e-13,43;CL:0000221,2.13e-12,44;CL:0000133,2.13e-12,44;CL:0000393,2.89e-10,39;CL:0000211,2.89e-10,39;CL:0000540,9.66e-10,33;CL:0000047,9.66e-10,33;CL:0000031,9.66e-10,33;CL:0000404,9.66e-10,33;CL:0000117,1.07e-08,23;CL:0000337,1.07e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.53e-20!75;UBERON:0001016!5.53e-20!75;UBERON:0001017!3.78e-19!73;UBERON:0005743!3.78e-19!73;UBERON:0004121!9.90e-17!102;UBERON:0000924!9.90e-17!102;UBERON:0006601!9.90e-17!102;UBERON:0000033!2.02e-13!63;UBERON:0001049!3.36e-13!52;UBERON:0005068!3.36e-13!52;UBERON:0006241!3.36e-13!52;UBERON:0007135!3.36e-13!52;UBERON:0000955!1.00e-12!50;UBERON:0006238!1.00e-12!50;UBERON:0002346!2.14e-12!71;UBERON:0003075!2.14e-12!71;UBERON:0007284!2.14e-12!71;UBERON:0002616!3.23e-12!49;UBERON:0002020!9.20e-12!34;UBERON:0002791!1.31e-09!29;UBERON:0003528!1.31e-09!29;UBERON:0001893!1.31e-09!29;UBERON:0003056!7.15e-09!49;UBERON:0003080!1.21e-08!40;UBERON:0002780!3.93e-08!39;UBERON:0001890!3.93e-08!39;UBERON:0006240!3.93e-08!39;UBERON:0000956!4.18e-08!21;UBERON:0001869!4.18e-08!21;UBERON:0000203!4.18e-08!21;UBERON:0002619!6.29e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.23e-27,75;UBERON:0001017,3.85e-26,73;UBERON:0000073,3.03e-22,54;UBERON:0004121,3.53e-22,95;UBERON:0000924,3.53e-22,95;UBERON:0006601,3.53e-22,95;UBERON:0001049,5.09e-20,52;UBERON:0005068,5.09e-20,52;UBERON:0006241,5.09e-20,52;UBERON:0007135,5.09e-20,52;UBERON:0002346,2.12e-16,64;UBERON:0003075,2.12e-16,64;UBERON:0007284,2.12e-16,64;UBERON:0002020,2.98e-16,34;UBERON:0000955,6.97e-16,47;UBERON:0006238,6.97e-16,47;UBERON:0002616,5.27e-15,46;UBERON:0010371,4.77e-13,73;UBERON:0003528,2.50e-12,29;UBERON:0002791,2.50e-12,29;UBERON:0001893,2.50e-12,29;UBERON:0003076,3.35e-11,12;UBERON:0003057,3.35e-11,12;UBERON:0003080,5.09e-11,40;UBERON:0002780,3.76e-10,39;UBERON:0001890,3.76e-10,39;UBERON:0006240,3.76e-10,39;UBERON:0002021,9.84e-10,10;UBERON:0000411,9.84e-10,10;UBERON:0001950,9.84e-10,10;UBERON:0000956,1.15e-09,21;UBERON:0001869,1.15e-09,21;UBERON:0000203,1.15e-09,21;UBERON:0003056,1.69e-09,49;UBERON:0011216,2.23e-09,194;UBERON:0010314,5.33e-09,92;UBERON:0002619,3.36e-08,17;UBERON:0004111,4.42e-07,122;UBERON:0000025,4.84e-07,114;UBERON:0002240,6.85e-07,6;UBERON:0005174,6.85e-07,6;UBERON:0001137,6.85e-07,6 | |||
|phase1_expression=0.80074423552397,1.04692622291808,0.454999239389536,1.81478526784098,0,0.503637815735669,0.233612640595526,0.129123323441576,0.563154888606667,0,0,0.0797721589953364,0,0,1.33243904726265,0.607425802169478,0.699561878128147,0,0.274228867211478,0,3.31668831589172,0.0992909512008853,0,0.319984845586813,0.22940928106717,0.57423196411502,0.430761996159075,0.430942465371778,0.190023419456374,0.756090389279792,0.221730510655305,0.635030673459631,0,0,0.577703239502549,0,0.816677425049476,0,0,0,0,0,0,1.1330713617802,1.21652317463417,0.917733760808408,0,1.09012578190223,0.659058548203415,1.1665793944457,0.419959264876088,1.43752564364972,0.167782606057736,0,0.672187598284928,0.514518872071894,0.85960031981627,2.06268836910977,0.202316460859598,0,0.633831403506179,0.677689064138264,0,0.449949858640699,0,0,2.09720077362883,2.68952813725088,1.14058573539325,1.08004750665353,0.630974884054146,2.85650984403804,1.10434270475807,0.734944795289724,0.287536413054709,1.83843757322004,8.8092704799511,14.4286692036262,11.2132769277058,1.45074916503213,0.548925861614458,0.52091337055676,10.6089539620525,3.93933827022176,7.02871939773326,2.06240009831567,1.70846016958924,1.67759501242771,1.51452386666368,1.058001841495,3.76823835312181,1.72084775396277,1.3599426674155,0,0,0.448026887097336,1.26399978118577,0.511290967734173,0.519572009205738,0.70667914902068,0.422530259330042,1.28326477414318,0,21.3320010945999,1.08245520505607,1.01343946190039,0,0.79928715803342,0.258937883647172,0.445326417194474,0.346970653532272,0.608930956624282,0,0.301445281105245,0.352766121407114,0.376999773989026,0,0,1.76922110389975,0.647067399789637,1.76673214768315,0.969750506270444,0,7.31951992528868,7.33063473847093,0.510914110417183,1.1981512450592,0.599902730993408,0.381210681219194,5.99162557619291,2.74500361691176,0,4.86708096538374,4.34716277461562,8.3115217823824,8.92326946872667,0.407357455401265,0.248813941220186,0,0.631325567659422,0.650602214813519,0.229902104433473,0.720248519221397,0.452114453507145,0.816437989815934,1.2811372028485,1.40552586839593,0,0,0.378212160335639,0,0,0,0,0.205782136407943,0.199034266818493,0,0.257347907114715,0.852490498186778,0.828503090142008,0,0.36012412292203,0.473489471170421,0.787056926989615,0.617068451549513,0.232533944750408,0,0,0.658239399653922,0.164167464079095,0.486412857275134,0.438599962275997,0.658650345873152,0.671032093801859,1.05144974282064,0.720332286654991,0,0,0.426576501070468,0.696710015581316,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0,0.387904974335251,0,0.189709611372772,0.295220295959204,0,0.370191491765402,0.592905254174298,0.500535317148282,0.196558995113203,0,0.202860121388503,0,0.50925170356284,0,0,0.549122826376163,0,0.372140947668503,0,0.252578877947112,0.538192240565737,0,0.369506380333209,0.37898282354097,0.488894929326078,0.169745085775188,0.469380496577004,0,0.238043640886014,0.390267295715598,0.157635144106191,0.44292937929755,0.956728611944923,0,0.345369963731791,0,0,0,0.491764273019036,0.551873492609465,15.8945084087914,17.5817529888305,0.163934945376675,0.504941854408746,0.631016438832513,0.780877488593277,0.861693590931196,0.716906393857656,2.00518806674155,1.69845918473299,1.61924280669958,1.16902343164525,4.34816555741176,3.21321316421807,0.425820255624806,0.890328018336276,0.162886959353576,0.329940245945071,0,0,0.604647113929502,0.188605079755898,0,0,0.516856586336442,0,0,0,0,1.03135543248187,0.340439605753788,0.18006109403131,0,0,0.709360934569094,0.178368817602071,0.658196082408484,0.608929898229199,0.469343416127421,0.63549621259146,0.441056796109924,0.32977250588296,0.322928853391811,0.120625849856312,0.119372344003136,0.328281799490123,0.291480836629851,22.6218868452822,0.341741761595705,0.206386867963223,0,0,0.410082683163076,0.228778173206523,0.169978429993855,0.69975726161829,0.690999869022119,1.90934123603023,0.158167996790568,0.813277868507395,0.432021363287205,0,0.218362563746178,0.539457385539283,0.661227645802687,0.523511883968059,0.388844919875379,4.34937519160848,11.837551712368,0.149516546043979,0,0.388902376688095,0.129159823477731,0.337912250981556,0.469428954583016,1.17183946359555,0.629156066554265,2.41584120826006,4.32045009386798,0,0,0.205421914329655,0,0,0,0,0,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0.288635524920988,0,0.453460767230423,0.443971906748129,0.179427713218951,0.167884616364078,0.772758376128762,0.187682475451182,0.36630324853453,1.50057865355346,0.501572104035363,0.564751842617067,2.30162618253588,2.29158205375759,3.26521046453006,4.11049511862385,3.0215755895588,3.37511250115903,5.85417564191487,4.53142408984205,6.21312374102184,0.62272408550506,0.798049746802062,0.853668028770671,0.972426868273176,0.209613162627982,0.367687016900028,0.44449345560323,0.618105171716683,0.320919209591815,1.26348605881899,0.50695859978048,0.188626341386076,0.655490552289177,0.512201219238954,0.689225627467359,0,0.579421629724277,0.964546102318525,1.23625770240992,0.294397840268795,0.342869252385415,0.70990322463735,0.238436189947321,0,0.846984423737976,0.676916863133412,0.73171189149109,0.789209134313529,0.271608227691724,0,0.355905054372522,0.492522411877817,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0,0.661774257358546,0.463735671240843 | |phase1_expression=0.80074423552397,1.04692622291808,0.454999239389536,1.81478526784098,0,0.503637815735669,0.233612640595526,0.129123323441576,0.563154888606667,0,0,0.0797721589953364,0,0,1.33243904726265,0.607425802169478,0.699561878128147,0,0.274228867211478,0,3.31668831589172,0.0992909512008853,0,0.319984845586813,0.22940928106717,0.57423196411502,0.430761996159075,0.430942465371778,0.190023419456374,0.756090389279792,0.221730510655305,0.635030673459631,0,0,0.577703239502549,0,0.816677425049476,0,0,0,0,0,0,1.1330713617802,1.21652317463417,0.917733760808408,0,1.09012578190223,0.659058548203415,1.1665793944457,0.419959264876088,1.43752564364972,0.167782606057736,0,0.672187598284928,0.514518872071894,0.85960031981627,2.06268836910977,0.202316460859598,0,0.633831403506179,0.677689064138264,0,0.449949858640699,0,0,2.09720077362883,2.68952813725088,1.14058573539325,1.08004750665353,0.630974884054146,2.85650984403804,1.10434270475807,0.734944795289724,0.287536413054709,1.83843757322004,8.8092704799511,14.4286692036262,11.2132769277058,1.45074916503213,0.548925861614458,0.52091337055676,10.6089539620525,3.93933827022176,7.02871939773326,2.06240009831567,1.70846016958924,1.67759501242771,1.51452386666368,1.058001841495,3.76823835312181,1.72084775396277,1.3599426674155,0,0,0.448026887097336,1.26399978118577,0.511290967734173,0.519572009205738,0.70667914902068,0.422530259330042,1.28326477414318,0,21.3320010945999,1.08245520505607,1.01343946190039,0,0.79928715803342,0.258937883647172,0.445326417194474,0.346970653532272,0.608930956624282,0,0.301445281105245,0.352766121407114,0.376999773989026,0,0,1.76922110389975,0.647067399789637,1.76673214768315,0.969750506270444,0,7.31951992528868,7.33063473847093,0.510914110417183,1.1981512450592,0.599902730993408,0.381210681219194,5.99162557619291,2.74500361691176,0,4.86708096538374,4.34716277461562,8.3115217823824,8.92326946872667,0.407357455401265,0.248813941220186,0,0.631325567659422,0.650602214813519,0.229902104433473,0.720248519221397,0.452114453507145,0.816437989815934,1.2811372028485,1.40552586839593,0,0,0.378212160335639,0,0,0,0,0.205782136407943,0.199034266818493,0,0.257347907114715,0.852490498186778,0.828503090142008,0,0.36012412292203,0.473489471170421,0.787056926989615,0.617068451549513,0.232533944750408,0,0,0.658239399653922,0.164167464079095,0.486412857275134,0.438599962275997,0.658650345873152,0.671032093801859,1.05144974282064,0.720332286654991,0,0,0.426576501070468,0.696710015581316,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0,0.387904974335251,0,0.189709611372772,0.295220295959204,0,0.370191491765402,0.592905254174298,0.500535317148282,0.196558995113203,0,0.202860121388503,0,0.50925170356284,0,0,0.549122826376163,0,0.372140947668503,0,0.252578877947112,0.538192240565737,0,0.369506380333209,0.37898282354097,0.488894929326078,0.169745085775188,0.469380496577004,0,0.238043640886014,0.390267295715598,0.157635144106191,0.44292937929755,0.956728611944923,0,0.345369963731791,0,0,0,0.491764273019036,0.551873492609465,15.8945084087914,17.5817529888305,0.163934945376675,0.504941854408746,0.631016438832513,0.780877488593277,0.861693590931196,0.716906393857656,2.00518806674155,1.69845918473299,1.61924280669958,1.16902343164525,4.34816555741176,3.21321316421807,0.425820255624806,0.890328018336276,0.162886959353576,0.329940245945071,0,0,0.604647113929502,0.188605079755898,0,0,0.516856586336442,0,0,0,0,1.03135543248187,0.340439605753788,0.18006109403131,0,0,0.709360934569094,0.178368817602071,0.658196082408484,0.608929898229199,0.469343416127421,0.63549621259146,0.441056796109924,0.32977250588296,0.322928853391811,0.120625849856312,0.119372344003136,0.328281799490123,0.291480836629851,22.6218868452822,0.341741761595705,0.206386867963223,0,0,0.410082683163076,0.228778173206523,0.169978429993855,0.69975726161829,0.690999869022119,1.90934123603023,0.158167996790568,0.813277868507395,0.432021363287205,0,0.218362563746178,0.539457385539283,0.661227645802687,0.523511883968059,0.388844919875379,4.34937519160848,11.837551712368,0.149516546043979,0,0.388902376688095,0.129159823477731,0.337912250981556,0.469428954583016,1.17183946359555,0.629156066554265,2.41584120826006,4.32045009386798,0,0,0.205421914329655,0,0,0,0,0,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0.288635524920988,0,0.453460767230423,0.443971906748129,0.179427713218951,0.167884616364078,0.772758376128762,0.187682475451182,0.36630324853453,1.50057865355346,0.501572104035363,0.564751842617067,2.30162618253588,2.29158205375759,3.26521046453006,4.11049511862385,3.0215755895588,3.37511250115903,5.85417564191487,4.53142408984205,6.21312374102184,0.62272408550506,0.798049746802062,0.853668028770671,0.972426868273176,0.209613162627982,0.367687016900028,0.44449345560323,0.618105171716683,0.320919209591815,1.26348605881899,0.50695859978048,0.188626341386076,0.655490552289177,0.512201219238954,0.689225627467359,0,0.579421629724277,0.964546102318525,1.23625770240992,0.294397840268795,0.342869252385415,0.70990322463735,0.238436189947321,0,0.846984423737976,0.676916863133412,0.73171189149109,0.789209134313529,0.271608227691724,0,0.355905054372522,0.492522411877817,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0,0.661774257358546,0.463735671240843 | ||
|short_description=p3@Dync1li2 | |short_description=p3@Dync1li2 | ||
}} | }} |
Latest revision as of 06:45, 27 September 2015
Short description: | p3@Dync1li2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dync1li2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 91bp_to_ENSMUST00000041769, NM_001013380, uc009nao.2, uc009nap.2, uc012giy.1_5end |
EntrezGene: | Dync1li2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.24e-13 | 70 |
neural cell | 7.25e-13 | 43 |
ectodermal cell | 2.13e-12 | 44 |
neurectodermal cell | 2.13e-12 | 44 |
electrically responsive cell | 2.89e-10 | 39 |
electrically active cell | 2.89e-10 | 39 |
neuron | 9.66e-10 | 33 |
neuronal stem cell | 9.66e-10 | 33 |
neuroblast | 9.66e-10 | 33 |
electrically signaling cell | 9.66e-10 | 33 |
CNS neuron (sensu Vertebrata) | 1.07e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.07e-08 | 23 |