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FFCP PHASE1:Mm9::chrX:56387598..56387622,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14168
|EntrezGene=14168
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8VCY9
|UniProt=Q8VCY9
|association_with_transcript=0bp_to_ENSMUST00000033473,NM_010200,uc009tht.1_5end
|association_with_transcript=0bp_to_ENSMUST00000033473,NM_010200,uc009tht.1_5end
|cluster_id=chrX:56387598..56387622,-
|description=CAGE_peak_5_at_Fgf13_5end
|description=CAGE_peak_5_at_Fgf13_5end
|id=chrX:56387598..56387622,-
|id=chrX:56387598..56387622,-
|ontology_enrichment_celltype=CL:0000117!5.91e-14!23;CL:0000337!5.91e-14!23;CL:0000540!9.44e-09!33;CL:0000047!9.44e-09!33;CL:0000031!9.44e-09!33;CL:0000404!9.44e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,3.98e-18,23;CL:0000337,3.98e-18,23;CL:0000540,1.07e-11,33;CL:0000047,1.07e-11,33;CL:0000031,1.07e-11,33;CL:0000404,1.07e-11,33;CL:0000393,1.38e-08,39;CL:0000211,1.38e-08,39;CL:0002319,6.90e-08,43;CL:0000221,1.60e-07,44;CL:0000133,1.60e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!5.22e-21!52;UBERON:0005068!5.22e-21!52;UBERON:0006241!5.22e-21!52;UBERON:0007135!5.22e-21!52;UBERON:0003056!9.38e-21!49;UBERON:0002346!1.46e-20!71;UBERON:0003075!1.46e-20!71;UBERON:0007284!1.46e-20!71;UBERON:0002616!7.47e-19!49;UBERON:0001017!9.19e-19!73;UBERON:0005743!9.19e-19!73;UBERON:0000033!1.09e-18!63;UBERON:0000955!1.84e-18!50;UBERON:0006238!1.84e-18!50;UBERON:0002020!3.18e-18!34;UBERON:0003080!4.85e-18!40;UBERON:0000073!1.23e-17!75;UBERON:0001016!1.23e-17!75;UBERON:0002780!2.39e-17!39;UBERON:0001890!2.39e-17!39;UBERON:0006240!2.39e-17!39;UBERON:0004121!1.19e-16!102;UBERON:0000924!1.19e-16!102;UBERON:0006601!1.19e-16!102;UBERON:0002791!1.27e-14!29;UBERON:0003528!1.27e-14!29;UBERON:0001893!1.27e-14!29;UBERON:0000153!3.73e-14!94;UBERON:0007811!1.73e-13!86;UBERON:0000956!4.73e-10!21;UBERON:0001869!4.73e-10!21;UBERON:0000203!4.73e-10!21;UBERON:0002619!2.40e-08!17;UBERON:0002021!7.77e-07!10;UBERON:0000411!7.77e-07!10;UBERON:0001950!7.77e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.03e-30,64;UBERON:0003075,8.03e-30,64;UBERON:0007284,8.03e-30,64;UBERON:0000073,3.49e-29,54;UBERON:0001049,4.54e-27,52;UBERON:0005068,4.54e-27,52;UBERON:0006241,4.54e-27,52;UBERON:0007135,4.54e-27,52;UBERON:0003056,6.12e-25,49;UBERON:0001017,8.68e-24,73;UBERON:0010371,1.20e-23,73;UBERON:0002020,8.39e-23,34;UBERON:0001016,1.27e-22,75;UBERON:0003080,3.34e-21,40;UBERON:0002616,3.38e-21,46;UBERON:0004121,3.82e-21,95;UBERON:0000924,3.82e-21,95;UBERON:0006601,3.82e-21,95;UBERON:0000955,1.97e-20,47;UBERON:0006238,1.97e-20,47;UBERON:0002780,2.95e-20,39;UBERON:0001890,2.95e-20,39;UBERON:0006240,2.95e-20,39;UBERON:0010314,5.36e-20,92;UBERON:0003528,8.89e-18,29;UBERON:0002791,8.89e-18,29;UBERON:0001893,8.89e-18,29;UBERON:0000956,2.01e-11,21;UBERON:0001869,2.01e-11,21;UBERON:0000203,2.01e-11,21;UBERON:0002021,4.10e-09,10;UBERON:0000411,4.10e-09,10;UBERON:0001950,4.10e-09,10;UBERON:0002619,4.89e-09,17;UBERON:0000025,8.45e-08,114;UBERON:0002420,8.56e-08,8;UBERON:0007245,8.56e-08,8;UBERON:0010009,8.56e-08,8;UBERON:0010011,8.56e-08,8;UBERON:0000454,8.56e-08,8;UBERON:0002240,2.82e-07,6;UBERON:0005174,2.82e-07,6;UBERON:0001137,2.82e-07,6
|phase1_expression=0,0,0,0,0,0,0,0.903863264091034,0.140788722151667,0.70219357896598,0.171217968225505,0.0797721589953364,0.856003649656029,0.786783621770977,0.333109761815663,0.202475267389826,0,0.315462165358238,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61630187656536,0.439372365468944,0.777719596297134,0.419959264876088,0,0.167782606057736,0,1.00828139742739,0,0,0,4.04632921719196,6.87688273053643,3.80298842103708,0.338844532069132,0,0,0,0,0.599200221036809,0.384218305321555,2.38486108309499,2.56511282830212,1.68259969081106,9.14083150092171,12.1477697523387,3.06226998037385,2.20444583341944,0.919218786610021,6.60695285996332,10.9811110753261,10.4452442614246,4.2203612073662,4.84884511092771,3.64639359389732,7.81712397203867,8.4414391504752,8.55670187550137,14.4368006882097,10.9626194215309,7.64237727883732,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,2.16491041011214,2.28023878927589,1.51657333504435,0.45673551887624,0.258937883647172,0,0.346970653532272,0.608930956624282,0.461230994512117,0.301445281105245,0.23517741427141,0,0,0.289198713839823,0.884610551949874,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0,0,0,0,0,8.53806644607489,3.20250421973039,2.63874139437015,6.77914848749878,7.41574826257959,10.5971902725376,5.02947915510049,0.712875546952214,0.497627882440372,0,0.210441855886474,2.99277018814219,2.06911893990126,2.16074555766419,2.10986744970001,2.4493139694478,2.17793324484245,1.40552586839593,1.81092359517311,0.431135985865684,1.89106080167819,0.879755620819744,0.219195732427575,2.22437799380478,0.696504333044333,1.23469281844766,1.19420560091096,0,0,0,0.828503090142008,1.40715635988658,0.540186184383045,1.89395788468168,1.37734962223183,2.1597395804233,2.09280550275367,1.87791380979733,0.583826711835847,0.987359099480883,0.164167464079095,0.0810688095458557,0.292399974850665,0,0.268412837520744,10.0939175310781,6.17427674275707,0.330418782983798,0,0.213288250535234,0.928946687441754,0.515469845288373,0.80673409849337,0.444756087689741,1.14135375667535,0.474529061544512,0.329397909448022,1.00534083520108,0.198956472041151,0.58489226135736,0,0,0,0.379335801906163,0.799739588268102,0,0.610953983535943,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,1.00107063429656,1.96558995113203,0.899448449539415,0.811440485554012,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.568474235311454,0.488894929326078,0.339490171550376,0.704070744865506,0.335012514883631,0,0,0,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0.827810238914197,7.38532713943843,7.03270119553219,0,0,1.26203287766503,0.390438744296638,0.430846795465598,0,0,0,0.809621403349789,0,1.18586333383957,0.321321316421807,0.283880170416537,0.534196811001766,1.62886959353576,0,0,0,0,0,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,3.74483566329167,1.08036656418786,1.4229455216103,0.857348140126369,0.532020700926821,2.31879462882692,1.64549020602121,1.2178597964584,0,0,0,0.49465875882444,0.322928853391811,0.965006798850494,0.358117032009409,0.656563598980245,0,6.48988557036784,0,0.412773735926445,0.185194527369712,0.376736914009382,0.27338845544205,0.686334519619568,0,0,0,0,1.26534397432454,2.03319467126849,0.432021363287205,1.25452977608681,0.87345025498471,0.539457385539283,0.578574190077352,0.26175594198403,0.129614973291793,0,0.56369293868419,2.39226473670366,1.98550188548517,2.52786544847262,3.22899558694328,3.8859908862879,2.58185925020659,2.73429208172295,3.14578033277133,0,0.864090018773596,1.89606672376907,0.202725215290164,0.513554785824136,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0.605798699688886,0.0762068066549998,0.302478555410522,2.14407337627455,1.34696578296461,0.818138315270983,0,0,0,0.167884616364078,0.19318959403219,0.187682475451182,0,0,0,6.21227026878773,4.60325236507177,8.02053718815155,6.53042092906013,6.16574267793578,4.5323633843382,2.70009000092722,4.05289082901798,1.81256963593682,10.8729665467882,1.55681021376265,1.59609949360412,0.682934423016537,0.486213434136588,1.25767897576789,1.65459157605013,1.77797382241292,1.64828045791115,1.28367683836726,0.505394423527595,1.77435509923168,1.32038438970253,1.12369808963859,1.08842759088278,0.804096565378586,0.476293691283074,1.27472758539341,1.15745532278223,1.23625770240992,1.76638704161277,0.342869252385415,0.70990322463735,1.1921809497366,1.30811774969096,1.12931256498397,0.930760686808441,0.73171189149109,0.789209134313529,1.49384525230448,1.12228454331548,1.77952527186261,1.28055827088233,0.409231043169689,0.929621047115796,1.15743966588685,2.74791635731741,0.935726433781634,0.859484216193193,0.765153328275374,0.882365676478062,0.695603506861264
|phase1_expression=0,0,0,0,0,0,0,0.903863264091034,0.140788722151667,0.70219357896598,0.171217968225505,0.0797721589953364,0.856003649656029,0.786783621770977,0.333109761815663,0.202475267389826,0,0.315462165358238,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61630187656536,0.439372365468944,0.777719596297134,0.419959264876088,0,0.167782606057736,0,1.00828139742739,0,0,0,4.04632921719196,6.87688273053643,3.80298842103708,0.338844532069132,0,0,0,0,0.599200221036809,0.384218305321555,2.38486108309499,2.56511282830212,1.68259969081106,9.14083150092171,12.1477697523387,3.06226998037385,2.20444583341944,0.919218786610021,6.60695285996332,10.9811110753261,10.4452442614246,4.2203612073662,4.84884511092771,3.64639359389732,7.81712397203867,8.4414391504752,8.55670187550137,14.4368006882097,10.9626194215309,7.64237727883732,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0.704217098883403,0,0,0,2.16491041011214,2.28023878927589,1.51657333504435,0.45673551887624,0.258937883647172,0,0.346970653532272,0.608930956624282,0.461230994512117,0.301445281105245,0.23517741427141,0,0,0.289198713839823,0.884610551949874,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0,0,0,0,0,8.53806644607489,3.20250421973039,2.63874139437015,6.77914848749878,7.41574826257959,10.5971902725376,5.02947915510049,0.712875546952214,0.497627882440372,0,0.210441855886474,2.99277018814219,2.06911893990126,2.16074555766419,2.10986744970001,2.4493139694478,2.17793324484245,1.40552586839593,1.81092359517311,0.431135985865684,1.89106080167819,0.879755620819744,0.219195732427575,2.22437799380478,0.696504333044333,1.23469281844766,1.19420560091096,0,0,0,0.828503090142008,1.40715635988658,0.540186184383045,1.89395788468168,1.37734962223183,2.1597395804233,2.09280550275367,1.87791380979733,0.583826711835847,0.987359099480883,0.164167464079095,0.0810688095458557,0.292399974850665,0,0.268412837520744,10.0939175310781,6.17427674275707,0.330418782983798,0,0.213288250535234,0.928946687441754,0.515469845288373,0.80673409849337,0.444756087689741,1.14135375667535,0.474529061544512,0.329397909448022,1.00534083520108,0.198956472041151,0.58489226135736,0,0,0,0.379335801906163,0.799739588268102,0,0.610953983535943,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,1.00107063429656,1.96558995113203,0.899448449539415,0.811440485554012,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.568474235311454,0.488894929326078,0.339490171550376,0.704070744865506,0.335012514883631,0,0,0,0,0,0.163863314715738,0,0,0,0,0.491764273019036,0.827810238914197,7.38532713943843,7.03270119553219,0,0,1.26203287766503,0.390438744296638,0.430846795465598,0,0,0,0.809621403349789,0,1.18586333383957,0.321321316421807,0.283880170416537,0.534196811001766,1.62886959353576,0,0,0,0,0,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,3.74483566329167,1.08036656418786,1.4229455216103,0.857348140126369,0.532020700926821,2.31879462882692,1.64549020602121,1.2178597964584,0,0,0,0.49465875882444,0.322928853391811,0.965006798850494,0.358117032009409,0.656563598980245,0,6.48988557036784,0,0.412773735926445,0.185194527369712,0.376736914009382,0.27338845544205,0.686334519619568,0,0,0,0,1.26534397432454,2.03319467126849,0.432021363287205,1.25452977608681,0.87345025498471,0.539457385539283,0.578574190077352,0.26175594198403,0.129614973291793,0,0.56369293868419,2.39226473670366,1.98550188548517,2.52786544847262,3.22899558694328,3.8859908862879,2.58185925020659,2.73429208172295,3.14578033277133,0,0.864090018773596,1.89606672376907,0.202725215290164,0.513554785824136,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0.605798699688886,0.0762068066549998,0.302478555410522,2.14407337627455,1.34696578296461,0.818138315270983,0,0,0,0.167884616364078,0.19318959403219,0.187682475451182,0,0,0,6.21227026878773,4.60325236507177,8.02053718815155,6.53042092906013,6.16574267793578,4.5323633843382,2.70009000092722,4.05289082901798,1.81256963593682,10.8729665467882,1.55681021376265,1.59609949360412,0.682934423016537,0.486213434136588,1.25767897576789,1.65459157605013,1.77797382241292,1.64828045791115,1.28367683836726,0.505394423527595,1.77435509923168,1.32038438970253,1.12369808963859,1.08842759088278,0.804096565378586,0.476293691283074,1.27472758539341,1.15745532278223,1.23625770240992,1.76638704161277,0.342869252385415,0.70990322463735,1.1921809497366,1.30811774969096,1.12931256498397,0.930760686808441,0.73171189149109,0.789209134313529,1.49384525230448,1.12228454331548,1.77952527186261,1.28055827088233,0.409231043169689,0.929621047115796,1.15743966588685,2.74791635731741,0.935726433781634,0.859484216193193,0.765153328275374,0.882365676478062,0.695603506861264
|short_description=p5@Fgf13
|short_description=p5@Fgf13
}}
}}

Latest revision as of 22:26, 1 October 2015

Short description:p5@Fgf13
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Fgf13_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000033473, NM_010200, uc009tht.1_5end
EntrezGene:Fgf13
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Fgf13

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.79
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.15
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.85
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.56
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.44
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.64
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.54
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D56.78
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F210.60
diencephalon, neonate N30.CNhs11201.1388-42B25.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C62.99
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C62.45
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E810.09
hippocampus, neonate N00.CNhs11228.627-43G16.17
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C27.39
medulla oblongata, neonate N30.CNhs11200.1396-42A37.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.97
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C96.49
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.39
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I53.23
testis, embryo E18.CNhs11027.503-18G53.89
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D93.15
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A22.14
thymus, neonate N25.CNhs11125.1362-25G71.35
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.98e-1823
neuroblast (sensu Vertebrata)3.98e-1823
neuron1.07e-1133
neuronal stem cell1.07e-1133
neuroblast1.07e-1133
electrically signaling cell1.07e-1133
electrically responsive cell1.38e-0839
electrically active cell1.38e-0839
neural cell6.90e-0843
ectodermal cell1.60e-0744
neurectodermal cell1.60e-0744

Uber anatomy
Ontology termp-valuen
neurectoderm8.03e-3064
neural plate8.03e-3064
presumptive neural plate8.03e-3064
regional part of nervous system3.49e-2954
neural tube4.54e-2752
neural rod4.54e-2752
future spinal cord4.54e-2752
neural keel4.54e-2752
pre-chordal neural plate6.12e-2549
central nervous system8.68e-2473
ecto-epithelium1.20e-2373
gray matter8.39e-2334
nervous system1.27e-2275
anterior neural tube3.34e-2140
regional part of brain3.38e-2146
ectoderm-derived structure3.82e-2195
ectoderm3.82e-2195
presumptive ectoderm3.82e-2195
brain1.97e-2047
future brain1.97e-2047
regional part of forebrain2.95e-2039
forebrain2.95e-2039
future forebrain2.95e-2039
structure with developmental contribution from neural crest5.36e-2092
brain grey matter8.89e-1829
regional part of telencephalon8.89e-1829
telencephalon8.89e-1829
cerebral cortex2.01e-1121
cerebral hemisphere2.01e-1121
pallium2.01e-1121
occipital lobe4.10e-0910
visual cortex4.10e-0910
neocortex4.10e-0910
regional part of cerebral cortex4.89e-0917
tube8.45e-08114
basal ganglion8.56e-088
nuclear complex of neuraxis8.56e-088
aggregate regional part of brain8.56e-088
collection of basal ganglia8.56e-088
cerebral subcortex8.56e-088
spinal cord2.82e-076
dorsal region element2.82e-076
dorsum2.82e-076
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