FFCP PHASE1:Mm9::chr19:44407808..44407823,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=329065 | |EntrezGene=329065 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=10 | |||
|TSSclassifier=NA | |||
|UniProt=Q6T707 | |UniProt=Q6T707 | ||
|association_with_transcript=0bp_to_NM_183216,uc008hpq.1_5end | |association_with_transcript=0bp_to_NM_183216,uc008hpq.1_5end | ||
|cluster_id=chr19:44407808..44407823,+ | |||
|description=CAGE_peak_1_at_Scd4_5end | |description=CAGE_peak_1_at_Scd4_5end | ||
|id=chr19:44407808..44407823,+ | |id=chr19:44407808..44407823,+ | ||
|ontology_enrichment_celltype=CL:0002453!1.94e-10!8;CL:0000333!4.37e-08!10;CL:0000095!4.37e-08!10;CL:0000243!4.37e-08!10;CL:0000123!4.37e-08!10;CL:0000125!4.37e-08!10;CL:0000030!4.37e-08!10;CL:0000339!4.37e-08!10;CL:0000128!7.46e-08!6;CL:0000126!7.46e-08!6;CL:0000127!7.46e-08!6 | |ontology_enrichment_celltype=CL:0002453!1.94e-10!8;CL:0000333!4.37e-08!10;CL:0000095!4.37e-08!10;CL:0000243!4.37e-08!10;CL:0000123!4.37e-08!10;CL:0000125!4.37e-08!10;CL:0000030!4.37e-08!10;CL:0000339!4.37e-08!10;CL:0000128!7.46e-08!6;CL:0000126!7.46e-08!6;CL:0000127!7.46e-08!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.10e-15,6;CL:0000126,2.10e-15,6;CL:0000127,2.10e-15,6;CL:0002605,2.80e-12,2;CL:0002604,2.80e-12,2;CL:0002453,1.26e-11,8;CL:0000333,2.38e-09,10;CL:0000095,2.38e-09,10;CL:0000243,2.38e-09,10;CL:0000123,2.38e-09,10;CL:0000125,2.38e-09,10;CL:0000030,2.38e-09,10;CL:0000339,2.38e-09,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.95e-13!18;UBERON:0000948!2.95e-13!18;UBERON:0005498!2.95e-13!18;UBERON:0004140!2.95e-13!18;UBERON:0009881!2.95e-13!18;UBERON:0004141!2.95e-13!18;UBERON:0003084!2.95e-13!18;UBERON:0007005!2.95e-13!18;UBERON:0004139!2.95e-13!18;UBERON:0004291!2.95e-13!18;UBERON:0004535!1.14e-09!23;UBERON:0001009!1.14e-09!23;UBERON:0003103!6.05e-07!43 | |ontology_enrichment_uberon=UBERON:0007100!2.95e-13!18;UBERON:0000948!2.95e-13!18;UBERON:0005498!2.95e-13!18;UBERON:0004140!2.95e-13!18;UBERON:0009881!2.95e-13!18;UBERON:0004141!2.95e-13!18;UBERON:0003084!2.95e-13!18;UBERON:0007005!2.95e-13!18;UBERON:0004139!2.95e-13!18;UBERON:0004291!2.95e-13!18;UBERON:0004535!1.14e-09!23;UBERON:0001009!1.14e-09!23;UBERON:0003103!6.05e-07!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.02e-26,18;UBERON:0000948,3.02e-26,18;UBERON:0005498,3.02e-26,18;UBERON:0004140,3.02e-26,18;UBERON:0009881,3.02e-26,18;UBERON:0004141,3.02e-26,18;UBERON:0003084,3.02e-26,18;UBERON:0007005,3.02e-26,18;UBERON:0004139,3.02e-26,18;UBERON:0004291,3.02e-26,18;UBERON:0004535,2.43e-20,23;UBERON:0001009,2.43e-20,23;UBERON:0004872,7.02e-14,33;UBERON:0003103,2.07e-10,43;UBERON:0003914,1.96e-09,47;UBERON:0010314,6.96e-08,92;UBERON:0000305,3.20e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.19483016055474,1.75748946187577,2.72201858703997,0.55994568650145,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.91023896749996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0.787056926989615,0.771335564436891,2.55787339225449,3.75582761959467,8.52386999280337,25.013097186849,55.9811052509715,17.5108628619048,32.7487971832744,12.953456802172,17.0442151825672,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0.234690248288502,0,0,0.390267295715598,0.788175720530955,0.44292937929755,0.318909537314974,0,0.518054945597687,0.723245292907558,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0.238744688006273,0.492422699235184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.58678619322877,0.39061315453185,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.436039249896986,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.19483016055474,1.75748946187577,2.72201858703997,0.55994568650145,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,1.82577746171277,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.91023896749996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0.787056926989615,0.771335564436891,2.55787339225449,3.75582761959467,8.52386999280337,25.013097186849,55.9811052509715,17.5108628619048,32.7487971832744,12.953456802172,17.0442151825672,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0.234690248288502,0,0,0.390267295715598,0.788175720530955,0.44292937929755,0.318909537314974,0,0.518054945597687,0.723245292907558,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0.238744688006273,0.492422699235184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.58678619322877,0.39061315453185,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.436039249896986,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p1@Scd4 | |short_description=p1@Scd4 | ||
}} | }} |
Latest revision as of 19:57, 25 September 2015
Short description: | p1@Scd4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Scd4_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 0bp_to_NM_183216, uc008hpq.1_5end |
EntrezGene: | Scd4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.10e-15 | 6 |
macroglial cell | 2.10e-15 | 6 |
astrocyte | 2.10e-15 | 6 |
astrocyte of the cerebral cortex | 2.80e-12 | 2 |
astrocyte of the hippocampus | 2.80e-12 | 2 |
oligodendrocyte precursor cell | 1.26e-11 | 8 |
migratory neural crest cell | 2.38e-09 | 10 |
neuron associated cell | 2.38e-09 | 10 |
glial cell (sensu Vertebrata) | 2.38e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 2.38e-09 | 10 |
glial cell | 2.38e-09 | 10 |
glioblast | 2.38e-09 | 10 |
glioblast (sensu Vertebrata) | 2.38e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.02e-26 | 18 |
heart | 3.02e-26 | 18 |
primitive heart tube | 3.02e-26 | 18 |
primary heart field | 3.02e-26 | 18 |
anterior lateral plate mesoderm | 3.02e-26 | 18 |
heart tube | 3.02e-26 | 18 |
heart primordium | 3.02e-26 | 18 |
cardiac mesoderm | 3.02e-26 | 18 |
cardiogenic plate | 3.02e-26 | 18 |
heart rudiment | 3.02e-26 | 18 |
cardiovascular system | 2.43e-20 | 23 |
circulatory system | 2.43e-20 | 23 |
splanchnic layer of lateral plate mesoderm | 7.02e-14 | 33 |
compound organ | 2.07e-10 | 43 |
epithelial tube | 1.96e-09 | 47 |
structure with developmental contribution from neural crest | 6.96e-08 | 92 |
amnion | 3.20e-07 | 1 |