Personal tools

FFCP PHASE1:Mm9::chr7:71646536..71646569,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=11784
|EntrezGene=11784
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=P98084
|UniProt=P98084
|association_with_transcript=-22bp_to_ENSMUST00000032732,NM_007461,uc009hgj.2_5end
|association_with_transcript=-22bp_to_ENSMUST00000032732,NM_007461,uc009hgj.2_5end
|cluster_id=chr7:71646536..71646569,+
|description=CAGE_peak_2_at_Apba2_5end
|description=CAGE_peak_2_at_Apba2_5end
|id=chr7:71646536..71646569,+
|id=chr7:71646536..71646569,+
|ontology_enrichment_celltype=CL:0000540!4.19e-18!33;CL:0000047!4.19e-18!33;CL:0000031!4.19e-18!33;CL:0000404!4.19e-18!33;CL:0000221!7.35e-16!44;CL:0000133!7.35e-16!44;CL:0002319!8.66e-16!43;CL:0000117!5.28e-15!23;CL:0000337!5.28e-15!23;CL:0000393!1.77e-12!39;CL:0000211!1.77e-12!39;CL:0000055!8.28e-11!50
|ontology_enrichment_celltype=CL:0000540!4.19e-18!33;CL:0000047!4.19e-18!33;CL:0000031!4.19e-18!33;CL:0000404!4.19e-18!33;CL:0000221!7.35e-16!44;CL:0000133!7.35e-16!44;CL:0002319!8.66e-16!43;CL:0000117!5.28e-15!23;CL:0000337!5.28e-15!23;CL:0000393!1.77e-12!39;CL:0000211!1.77e-12!39;CL:0000055!8.28e-11!50
|ontology_enrichment_celltype_v019_2=CL:0000540,5.81e-22,33;CL:0000047,5.81e-22,33;CL:0000031,5.81e-22,33;CL:0000404,5.81e-22,33;CL:0000117,5.86e-19,23;CL:0000337,5.86e-19,23;CL:0000221,1.09e-18,44;CL:0000133,1.09e-18,44;CL:0002319,1.39e-18,43;CL:0000393,1.46e-16,39;CL:0000211,1.46e-16,39;CL:0002321,5.83e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.81e-33!75;UBERON:0001016!1.81e-33!75;UBERON:0001017!3.70e-33!73;UBERON:0005743!3.70e-33!73;UBERON:0004121!1.80e-31!102;UBERON:0000924!1.80e-31!102;UBERON:0006601!1.80e-31!102;UBERON:0002346!7.59e-28!71;UBERON:0003075!7.59e-28!71;UBERON:0007284!7.59e-28!71;UBERON:0000033!3.48e-25!63;UBERON:0001049!5.73e-24!52;UBERON:0005068!5.73e-24!52;UBERON:0006241!5.73e-24!52;UBERON:0007135!5.73e-24!52;UBERON:0003056!1.12e-22!49;UBERON:0000955!2.48e-22!50;UBERON:0006238!2.48e-22!50;UBERON:0002616!5.77e-22!49;UBERON:0002020!2.13e-19!34;UBERON:0003080!4.46e-19!40;UBERON:0002780!1.58e-18!39;UBERON:0001890!1.58e-18!39;UBERON:0006240!1.58e-18!39;UBERON:0002791!2.06e-16!29;UBERON:0003528!2.06e-16!29;UBERON:0001893!2.06e-16!29;UBERON:0007811!3.41e-16!86;UBERON:0000153!1.27e-15!94;UBERON:0000956!1.21e-11!21;UBERON:0001869!1.21e-11!21;UBERON:0000203!1.21e-11!21;UBERON:0002619!3.73e-09!17;UBERON:0002021!1.90e-08!10;UBERON:0000411!1.90e-08!10;UBERON:0001950!1.90e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.31e-40,75;UBERON:0001017,3.40e-40,73;UBERON:0004121,1.04e-37,95;UBERON:0000924,1.04e-37,95;UBERON:0006601,1.04e-37,95;UBERON:0002346,2.17e-35,64;UBERON:0003075,2.17e-35,64;UBERON:0007284,2.17e-35,64;UBERON:0000073,1.52e-31,54;UBERON:0001049,4.92e-30,52;UBERON:0005068,4.92e-30,52;UBERON:0006241,4.92e-30,52;UBERON:0007135,4.92e-30,52;UBERON:0010371,5.19e-29,73;UBERON:0003056,4.02e-28,49;UBERON:0000955,8.98e-26,47;UBERON:0006238,8.98e-26,47;UBERON:0002020,2.12e-25,34;UBERON:0002616,2.63e-25,46;UBERON:0003080,2.69e-24,40;UBERON:0002780,1.39e-23,39;UBERON:0001890,1.39e-23,39;UBERON:0006240,1.39e-23,39;UBERON:0003528,1.62e-21,29;UBERON:0002791,1.62e-21,29;UBERON:0001893,1.62e-21,29;UBERON:0010314,1.86e-20,92;UBERON:0000956,2.58e-15,21;UBERON:0001869,2.58e-15,21;UBERON:0000203,2.58e-15,21;UBERON:0002619,4.55e-12,17;UBERON:0002021,1.78e-10,10;UBERON:0000411,1.78e-10,10;UBERON:0001950,1.78e-10,10;UBERON:0002420,2.33e-07,8;UBERON:0007245,2.33e-07,8;UBERON:0010009,2.33e-07,8;UBERON:0010011,2.33e-07,8;UBERON:0000454,2.33e-07,8
|phase1_expression=0.80074423552397,0.348975407639361,0,0,0,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0.799962113967033,1.14704640533585,0,0,0.430942465371778,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.419959264876088,4.31257693094915,0,0,0,0,0,0,20.2316460859598,21.1596391708813,23.4517619297286,0,0,0,0,0,2.69640099466564,2.30530983192933,17.1087860308988,23.4910332697142,19.7705463670299,11.1403883917483,8.61387309711293,21.313399063402,19.6483215587385,22.0612508786405,16.5173821499083,7.66124028511126,10.4452442614246,30.597618753405,29.6419965271807,29.1711487511786,12.5632349550621,5.6276261003168,10.5430790965999,18.8562294703147,15.3761415263031,27.0279196446686,1.8931548333296,1.20914496170857,0,0,0,0,0,0,0.702222100658759,0,0,0,1.12674735821344,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,1.73485326766136,0.608930956624282,0.922461989024234,1.80867168663147,1.17588707135705,0,0,0,0,0,0,0,0,14.3462590535658,14.2423760633149,0,0,0,0,10.7849260371472,5.94750783664214,20.8586224507355,20.8589184230732,20.4572365864264,11.6361304953354,12.6548185192851,0,0,0,0.631325567659422,3.3831315170303,5.28774840196988,9.00310649026746,9.0422890701429,14.8319568149895,18.9608306021578,18.7403449119458,1.55222022443409,1.29340795759705,0.756424320671277,0.703804496655795,0.43839146485515,0.834141747676794,0,0.411564272815887,0.398068533636986,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.329119699826961,0,0.162137619091711,0.146199987425332,0,0,15.9820360908737,25.2116300329247,0,0.528901133327089,1.06644125267617,0.696710015581316,0.38660238396628,0.201683524623343,0.889512175379481,0.760902504450237,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.779856348476481,0,0,0,0.948339504765408,0.799739588268102,2.25415471346161,0,0.387904974335251,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.339490171550376,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,10.7568895291821,10.5490517932983,0,0,4.41711507182759,2.73307121007647,3.01592756825919,8.60287672629187,9.13474563737816,8.49229592366497,6.8817819284732,5.26060544240361,4.34816555741176,4.17717711348349,0.283880170416537,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0.340439605753788,3.96134406868882,1.81102157295856,1.50035924522115,2.83744373827638,4.45922044005176,3.62007845324666,2.13125464380219,0.23467170806371,0,0,0.16488625294148,0,0.120625849856312,0,0.328281799490123,0,9.08583979851498,0,0,0,0,0,0,0,0,0,0,1.26534397432454,1.62655573701479,0.648032044930808,0.627264888043406,1.31017538247707,0.944050424693745,0.661227645802687,0,0.259229946583586,0,0,0,0,0.583353565032143,0.129159823477731,0,0.234714477291508,0,0.209718688851422,0,0,0.948033361884535,0.405450430580328,1.33524244314275,0.25984164595559,0.358053391334963,0,0,0.147689527174577,0.403865799792591,0.15241361331,0.100826185136841,0.38983152295901,0.577271049841977,0.350630706544707,0.453460767230423,0,0,0,0.386379188064381,0.750729901804728,0.549454872801795,0.428736758158132,0,40.6621326684288,23.9369122983732,27.498984645091,32.995811009988,21.9226406326606,24.1726047164704,19.5756525067224,23.4167025676595,22.203978040226,33.1366599521165,3.73634451303036,5.58634822761443,5.12200817262403,3.16038732188782,5.03071590307158,3.49302666055027,2.889207461421,3.09052585858341,4.1719497246936,4.29585259998456,3.8021894983536,4.14977951049368,3.83930180626518,4.1616349063165,3.67587001315925,2.38146845641537,3.82418275618023,2.70072908649187,3.70877310722976,4.26876868389752,4.80016953339582,3.72699192934609,4.5302876089991,5.0871245821315,3.19971893412124,3.72304274723377,3.65855945745545,2.36762740294059,3.39510284614654,4.48913817326191,3.2031454893527,4.13718825977367,2.04615521584845,4.95797891795091,4.43685205256625,6.49507502638659,2.57324769289949,3.22306581072447,0.765153328275374,0.441182838239031,1.39120701372253
|phase1_expression=0.80074423552397,0.348975407639361,0,0,0,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0.799962113967033,1.14704640533585,0,0,0.430942465371778,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.419959264876088,4.31257693094915,0,0,0,0,0,0,20.2316460859598,21.1596391708813,23.4517619297286,0,0,0,0,0,2.69640099466564,2.30530983192933,17.1087860308988,23.4910332697142,19.7705463670299,11.1403883917483,8.61387309711293,21.313399063402,19.6483215587385,22.0612508786405,16.5173821499083,7.66124028511126,10.4452442614246,30.597618753405,29.6419965271807,29.1711487511786,12.5632349550621,5.6276261003168,10.5430790965999,18.8562294703147,15.3761415263031,27.0279196446686,1.8931548333296,1.20914496170857,0,0,0,0,0,0,0.702222100658759,0,0,0,1.12674735821344,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,1.73485326766136,0.608930956624282,0.922461989024234,1.80867168663147,1.17588707135705,0,0,0,0,0,0,0,0,14.3462590535658,14.2423760633149,0,0,0,0,10.7849260371472,5.94750783664214,20.8586224507355,20.8589184230732,20.4572365864264,11.6361304953354,12.6548185192851,0,0,0,0.631325567659422,3.3831315170303,5.28774840196988,9.00310649026746,9.0422890701429,14.8319568149895,18.9608306021578,18.7403449119458,1.55222022443409,1.29340795759705,0.756424320671277,0.703804496655795,0.43839146485515,0.834141747676794,0,0.411564272815887,0.398068533636986,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.329119699826961,0,0.162137619091711,0.146199987425332,0,0,15.9820360908737,25.2116300329247,0,0.528901133327089,1.06644125267617,0.696710015581316,0.38660238396628,0.201683524623343,0.889512175379481,0.760902504450237,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.779856348476481,0,0,0,0.948339504765408,0.799739588268102,2.25415471346161,0,0.387904974335251,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.339490171550376,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,10.7568895291821,10.5490517932983,0,0,4.41711507182759,2.73307121007647,3.01592756825919,8.60287672629187,9.13474563737816,8.49229592366497,6.8817819284732,5.26060544240361,4.34816555741176,4.17717711348349,0.283880170416537,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0.340439605753788,3.96134406868882,1.81102157295856,1.50035924522115,2.83744373827638,4.45922044005176,3.62007845324666,2.13125464380219,0.23467170806371,0,0,0.16488625294148,0,0.120625849856312,0,0.328281799490123,0,9.08583979851498,0,0,0,0,0,0,0,0,0,0,1.26534397432454,1.62655573701479,0.648032044930808,0.627264888043406,1.31017538247707,0.944050424693745,0.661227645802687,0,0.259229946583586,0,0,0,0,0.583353565032143,0.129159823477731,0,0.234714477291508,0,0.209718688851422,0,0,0.948033361884535,0.405450430580328,1.33524244314275,0.25984164595559,0.358053391334963,0,0,0.147689527174577,0.403865799792591,0.15241361331,0.100826185136841,0.38983152295901,0.577271049841977,0.350630706544707,0.453460767230423,0,0,0,0.386379188064381,0.750729901804728,0.549454872801795,0.428736758158132,0,40.6621326684288,23.9369122983732,27.498984645091,32.995811009988,21.9226406326606,24.1726047164704,19.5756525067224,23.4167025676595,22.203978040226,33.1366599521165,3.73634451303036,5.58634822761443,5.12200817262403,3.16038732188782,5.03071590307158,3.49302666055027,2.889207461421,3.09052585858341,4.1719497246936,4.29585259998456,3.8021894983536,4.14977951049368,3.83930180626518,4.1616349063165,3.67587001315925,2.38146845641537,3.82418275618023,2.70072908649187,3.70877310722976,4.26876868389752,4.80016953339582,3.72699192934609,4.5302876089991,5.0871245821315,3.19971893412124,3.72304274723377,3.65855945745545,2.36762740294059,3.39510284614654,4.48913817326191,3.2031454893527,4.13718825977367,2.04615521584845,4.95797891795091,4.43685205256625,6.49507502638659,2.57324769289949,3.22306581072447,0.765153328275374,0.441182838239031,1.39120701372253
|short_description=p2@Apba2
|short_description=p2@Apba2
}}
}}

Latest revision as of 00:40, 27 September 2015

Short description:p2@Apba2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Apba2_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -22bp_to_ENSMUST00000032732, NM_007461, uc009hgj.2_5end
EntrezGene:Apba2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Apba2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C320.23
Mouse Granule cells, donor2.CNhs12357.11731-123E321.16
Mouse Granule cells, donor3.CNhs12108.11636-122C723.45
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D517.11
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F523.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D919.77
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.61
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D221.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.06
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D430.60
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F429.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D829.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.54
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.86
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.38
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E127.03
Mouse Schwann, donor1.CNhs12507.11728-123D91.89
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B214.35
cerebellum, neonate N30.CNhs11135.1395-42I214.24
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.78
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F120.86
cortex, adult.CNhs10473.12-14D520.86
cortex, neonate N30.CNhs11107.1392-42F220.46
diencephalon, adult.CNhs10482.20-12F211.64
diencephalon, neonate N30.CNhs11201.1388-42B212.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C63.38
eyeball, embryo E14.CNhs10521.399-16E25.29
eyeball, embryo E15.CNhs10593.426-16C99.00
eyeball, embryo E17.CNhs11023.1261-18D49.04
eyeball, neonate N00.CNhs11207.633-15C614.83
eyeball, neonate N01.CNhs11140.1532-43E718.96
eyeball, neonate N02.CNhs11205.1551-44G818.74
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E815.98
hippocampus, neonate N00.CNhs11228.627-43G125.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C210.76
medulla oblongata, neonate N30.CNhs11200.1396-42A310.55
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.60
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.49
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E63.96
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F64.46
pituitary gland, embryo E17.CNhs11039.1265-44F53.62
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C99.09
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A140.66
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.94
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A327.50
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D733.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.92
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.17
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A619.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A723.42
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A822.20
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A933.14
whole body, embryo E11.CNhs11014.324-5I83.74
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H25.12
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.16
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron5.81e-2233
neuronal stem cell5.81e-2233
neuroblast5.81e-2233
electrically signaling cell5.81e-2233
CNS neuron (sensu Vertebrata)5.86e-1923
neuroblast (sensu Vertebrata)5.86e-1923
ectodermal cell1.09e-1844
neurectodermal cell1.09e-1844
neural cell1.39e-1843
electrically responsive cell1.46e-1639
electrically active cell1.46e-1639
embryonic cell5.83e-0770

Uber anatomy
Ontology termp-valuen
nervous system1.31e-4075
central nervous system3.40e-4073
ectoderm-derived structure1.04e-3795
ectoderm1.04e-3795
presumptive ectoderm1.04e-3795
neurectoderm2.17e-3564
neural plate2.17e-3564
presumptive neural plate2.17e-3564
regional part of nervous system1.52e-3154
neural tube4.92e-3052
neural rod4.92e-3052
future spinal cord4.92e-3052
neural keel4.92e-3052
ecto-epithelium5.19e-2973
pre-chordal neural plate4.02e-2849
brain8.98e-2647
future brain8.98e-2647
gray matter2.12e-2534
regional part of brain2.63e-2546
anterior neural tube2.69e-2440
regional part of forebrain1.39e-2339
forebrain1.39e-2339
future forebrain1.39e-2339
brain grey matter1.62e-2129
regional part of telencephalon1.62e-2129
telencephalon1.62e-2129
structure with developmental contribution from neural crest1.86e-2092
cerebral cortex2.58e-1521
cerebral hemisphere2.58e-1521
pallium2.58e-1521
regional part of cerebral cortex4.55e-1217
occipital lobe1.78e-1010
visual cortex1.78e-1010
neocortex1.78e-1010
basal ganglion2.33e-078
nuclear complex of neuraxis2.33e-078
aggregate regional part of brain2.33e-078
collection of basal ganglia2.33e-078
cerebral subcortex2.33e-078
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:71646536..71646569,%2B&oldid=4283211"