FFCP PHASE1:Mm9::chr7:53652031..53652039,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16502 | |EntrezGene=16502 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=P15388,E9PVV3,Q3TR92,Q3UHB6 | |UniProt=P15388,E9PVV3,Q3TR92,Q3UHB6 | ||
|association_with_transcript=164bp_to_ENSMUST00000025202,NM_001112739_5end | |association_with_transcript=164bp_to_ENSMUST00000025202,NM_001112739_5end | ||
|cluster_id=chr7:53652031..53652039,+ | |||
|description=CAGE_peak_19_at_Kcnc1_5end | |description=CAGE_peak_19_at_Kcnc1_5end | ||
|id=chr7:53652031..53652039,+ | |id=chr7:53652031..53652039,+ | ||
|ontology_enrichment_celltype=CL:0000117!8.03e-12!23;CL:0000337!8.03e-12!23;CL:0000540!1.73e-09!33;CL:0000047!1.73e-09!33;CL:0000031!1.73e-09!33;CL:0000404!1.73e-09!33;CL:0000393!1.03e-07!39;CL:0000211!1.03e-07!39;CL:0002611!1.95e-07!2;CL:0002319!8.26e-07!43 | |ontology_enrichment_celltype=CL:0000117!8.03e-12!23;CL:0000337!8.03e-12!23;CL:0000540!1.73e-09!33;CL:0000047!1.73e-09!33;CL:0000031!1.73e-09!33;CL:0000404!1.73e-09!33;CL:0000393!1.03e-07!39;CL:0000211!1.03e-07!39;CL:0002611!1.95e-07!2;CL:0002319!8.26e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.12e-15,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.45e-20!52;UBERON:0005068!5.45e-20!52;UBERON:0006241!5.45e-20!52;UBERON:0007135!5.45e-20!52;UBERON:0001017!1.70e-18!73;UBERON:0005743!1.70e-18!73;UBERON:0000073!7.00e-18!75;UBERON:0001016!7.00e-18!75;UBERON:0002616!4.08e-17!49;UBERON:0002346!4.97e-17!71;UBERON:0003075!4.97e-17!71;UBERON:0007284!4.97e-17!71;UBERON:0000955!1.07e-16!50;UBERON:0006238!1.07e-16!50;UBERON:0002020!3.79e-15!34;UBERON:0000033!3.91e-14!63;UBERON:0004121!2.85e-13!102;UBERON:0000924!2.85e-13!102;UBERON:0006601!2.85e-13!102;UBERON:0003076!4.91e-12!12;UBERON:0003057!4.91e-12!12;UBERON:0002791!6.10e-11!29;UBERON:0003528!6.10e-11!29;UBERON:0001893!6.10e-11!29;UBERON:0002780!7.09e-11!39;UBERON:0001890!7.09e-11!39;UBERON:0006240!7.09e-11!39;UBERON:0003080!1.54e-10!40;UBERON:0003056!1.36e-09!49;UBERON:0007811!2.63e-09!86;UBERON:0002240!1.09e-08!6;UBERON:0005174!1.09e-08!6;UBERON:0001137!1.09e-08!6;UBERON:0000153!3.49e-08!94;UBERON:0002298!3.74e-08!6;UBERON:0000025!8.29e-08!114;UBERON:0002256!1.95e-07!2;UBERON:0004111!5.11e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.12e-15,3;UBERON:0002275,1.12e-15,3;UBERON:0002037,3.12e-12,4;UBERON:0002680,3.12e-12,4;UBERON:0001895,3.12e-12,4;UBERON:0010092,3.12e-12,4;UBERON:0006215,3.12e-12,4;UBERON:0004733,1.29e-08,6;UBERON:0004732,1.29e-08,6;UBERON:0002028,1.29e-08,6;UBERON:0007277,1.29e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0.122490799214954,0,0,2.20231761998777,0,0.46081959976873,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.33063473847093,0,0,0,0,0,0,0.125654352112864,0.347648640384553,0.511430914660661,0.20778804455956,0.162241263067758,0,0.124406970610093,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0.430846795465598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0.900642406448441,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0.122490799214954,0,0,2.20231761998777,0,0.46081959976873,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.33063473847093,0,0,0,0,0,0,0.125654352112864,0.347648640384553,0.511430914660661,0.20778804455956,0.162241263067758,0,0.124406970610093,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0.430846795465598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0.900642406448441,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p19@Kcnc1 | |short_description=p19@Kcnc1 | ||
}} | }} |
Latest revision as of 22:21, 26 September 2015
Short description: | p19@Kcnc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_Kcnc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | 164bp_to_ENSMUST00000025202, NM_001112739_5end |
EntrezGene: | Kcnc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.12e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.12e-15 | 3 |
reticular formation | 1.12e-15 | 3 |
cerebellum | 3.12e-12 | 4 |
regional part of metencephalon | 3.12e-12 | 4 |
metencephalon | 3.12e-12 | 4 |
future metencephalon | 3.12e-12 | 4 |
rhombic lip | 3.12e-12 | 4 |
segmental subdivision of hindbrain | 1.29e-08 | 6 |
segmental subdivision of nervous system | 1.29e-08 | 6 |
hindbrain | 1.29e-08 | 6 |
presumptive hindbrain | 1.29e-08 | 6 |