FFCP PHASE1:Mm9::chrX:148776976..148777000,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=52808 | |EntrezGene=52808 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2616 | |||
|TSSclassifier=NA | |||
|UniProt=Q7TQI8 | |UniProt=Q7TQI8 | ||
|association_with_transcript=-8bp_to_ENSMUST00000044509,ENSMUST00000138918,ENSMUST00000149685_5end | |association_with_transcript=-8bp_to_ENSMUST00000044509,ENSMUST00000138918,ENSMUST00000149685_5end | ||
|cluster_id=chrX:148776976..148777000,- | |||
|description=CAGE_peak_1_at_Tspyl2_5end | |description=CAGE_peak_1_at_Tspyl2_5end | ||
|id=chrX:148776976..148777000,- | |id=chrX:148776976..148777000,- | ||
|ontology_enrichment_celltype=CL:0000393!4.54e-14!39;CL:0000211!4.54e-14!39;CL:0000540!6.14e-12!33;CL:0000047!6.14e-12!33;CL:0000031!6.14e-12!33;CL:0000404!6.14e-12!33;CL:0000055!1.07e-10!50;CL:0000221!7.84e-10!44;CL:0000133!7.84e-10!44;CL:0002319!1.65e-09!43;CL:0000117!2.08e-08!23;CL:0000337!2.08e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,4.54e-14,39;CL:0000211,4.54e-14,39;CL:0000540,6.14e-12,33;CL:0000047,6.14e-12,33;CL:0000031,6.14e-12,33;CL:0000404,6.14e-12,33;CL:0000221,7.84e-10,44;CL:0000133,7.84e-10,44;CL:0002319,1.65e-09,43;CL:0000117,2.08e-08,23;CL:0000337,2.08e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.86e-26!73;UBERON:0005743!5.86e-26!73;UBERON:0000073!2.48e-25!75;UBERON:0001016!2.48e-25!75;UBERON:0004121!8.57e-21!102;UBERON:0000924!8.57e-21!102;UBERON:0006601!8.57e-21!102;UBERON:0000955!1.52e-19!50;UBERON:0006238!1.52e-19!50;UBERON:0001049!1.57e-19!52;UBERON:0005068!1.57e-19!52;UBERON:0006241!1.57e-19!52;UBERON:0007135!1.57e-19!52;UBERON:0002616!6.05e-19!49;UBERON:0002346!9.91e-19!71;UBERON:0003075!9.91e-19!71;UBERON:0007284!9.91e-19!71;UBERON:0000033!2.09e-18!63;UBERON:0003080!2.37e-15!40;UBERON:0002780!1.14e-14!39;UBERON:0001890!1.14e-14!39;UBERON:0006240!1.14e-14!39;UBERON:0003056!3.07e-14!49;UBERON:0002020!3.94e-13!34;UBERON:0007811!1.59e-12!86;UBERON:0000153!2.24e-12!94;UBERON:0002791!2.28e-11!29;UBERON:0003528!2.28e-11!29;UBERON:0001893!2.28e-11!29;UBERON:0004111!1.84e-08!122;UBERON:0000025!1.21e-07!114;UBERON:0000956!2.06e-07!21;UBERON:0001869!2.06e-07!21;UBERON:0000203!2.06e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.86e-26,73;UBERON:0001016,2.48e-25,75;UBERON:0004121,4.07e-21,95;UBERON:0000924,4.07e-21,95;UBERON:0006601,4.07e-21,95;UBERON:0000073,6.55e-21,54;UBERON:0001049,1.57e-19,52;UBERON:0005068,1.57e-19,52;UBERON:0006241,1.57e-19,52;UBERON:0007135,1.57e-19,52;UBERON:0002346,1.61e-19,64;UBERON:0003075,1.61e-19,64;UBERON:0007284,1.61e-19,64;UBERON:0000955,1.58e-17,47;UBERON:0006238,1.58e-17,47;UBERON:0010371,2.02e-17,73;UBERON:0002616,6.07e-17,46;UBERON:0003080,2.37e-15,40;UBERON:0002780,1.14e-14,39;UBERON:0001890,1.14e-14,39;UBERON:0006240,1.14e-14,39;UBERON:0003056,3.07e-14,49;UBERON:0010314,1.89e-13,92;UBERON:0002020,3.94e-13,34;UBERON:0003528,2.28e-11,29;UBERON:0002791,2.28e-11,29;UBERON:0001893,2.28e-11,29;UBERON:0004111,1.84e-08,122;UBERON:0000025,1.21e-07,114;UBERON:0000956,2.06e-07,21;UBERON:0001869,2.06e-07,21;UBERON:0000203,2.06e-07,21 | |||
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| ||
|short_description=p1@Tspyl2 | |short_description=p1@Tspyl2 | ||
}} | }} |
Latest revision as of 16:50, 1 October 2015
Short description: | p1@Tspyl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tspyl2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2616 |
Association with transcript: | -8bp_to_ENSMUST00000044509, ENSMUST00000138918, ENSMUST00000149685_5end |
EntrezGene: | Tspyl2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 4.54e-14 | 39 |
electrically active cell | 4.54e-14 | 39 |
neuron | 6.14e-12 | 33 |
neuronal stem cell | 6.14e-12 | 33 |
neuroblast | 6.14e-12 | 33 |
electrically signaling cell | 6.14e-12 | 33 |
ectodermal cell | 7.84e-10 | 44 |
neurectodermal cell | 7.84e-10 | 44 |
neural cell | 1.65e-09 | 43 |
CNS neuron (sensu Vertebrata) | 2.08e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.08e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.86e-26 | 73 |
nervous system | 2.48e-25 | 75 |
ectoderm-derived structure | 4.07e-21 | 95 |
ectoderm | 4.07e-21 | 95 |
presumptive ectoderm | 4.07e-21 | 95 |
regional part of nervous system | 6.55e-21 | 54 |
neural tube | 1.57e-19 | 52 |
neural rod | 1.57e-19 | 52 |
future spinal cord | 1.57e-19 | 52 |
neural keel | 1.57e-19 | 52 |
neurectoderm | 1.61e-19 | 64 |
neural plate | 1.61e-19 | 64 |
presumptive neural plate | 1.61e-19 | 64 |
brain | 1.58e-17 | 47 |
future brain | 1.58e-17 | 47 |
ecto-epithelium | 2.02e-17 | 73 |
regional part of brain | 6.07e-17 | 46 |
anterior neural tube | 2.37e-15 | 40 |
regional part of forebrain | 1.14e-14 | 39 |
forebrain | 1.14e-14 | 39 |
future forebrain | 1.14e-14 | 39 |
pre-chordal neural plate | 3.07e-14 | 49 |
structure with developmental contribution from neural crest | 1.89e-13 | 92 |
gray matter | 3.94e-13 | 34 |
brain grey matter | 2.28e-11 | 29 |
regional part of telencephalon | 2.28e-11 | 29 |
telencephalon | 2.28e-11 | 29 |
anatomical conduit | 1.84e-08 | 122 |
tube | 1.21e-07 | 114 |
cerebral cortex | 2.06e-07 | 21 |
cerebral hemisphere | 2.06e-07 | 21 |
pallium | 2.06e-07 | 21 |