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FFCP PHASE1:Mm9::chr7:51684187..51684207,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=272381
|EntrezGene=272381
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=D3YZP3
|UniProt=D3YZP3
|association_with_transcript=-180bp_to_ENSMUST00000127790_5end
|association_with_transcript=-180bp_to_ENSMUST00000127790_5end
|cluster_id=chr7:51684187..51684207,+
|description=CAGE_peak_3_at_Lrrc4b_5end
|description=CAGE_peak_3_at_Lrrc4b_5end
|id=chr7:51684187..51684207,+
|id=chr7:51684187..51684207,+
|ontology_enrichment_celltype=CL:0000221!2.74e-16!44;CL:0000133!2.74e-16!44;CL:0002319!2.81e-16!43;CL:0000117!1.50e-15!23;CL:0000337!1.50e-15!23;CL:0000540!1.17e-14!33;CL:0000047!1.17e-14!33;CL:0000031!1.17e-14!33;CL:0000404!1.17e-14!33;CL:0000055!8.37e-12!50;CL:0000393!1.57e-10!39;CL:0000211!1.57e-10!39
|ontology_enrichment_celltype=CL:0000221!2.74e-16!44;CL:0000133!2.74e-16!44;CL:0002319!2.81e-16!43;CL:0000117!1.50e-15!23;CL:0000337!1.50e-15!23;CL:0000540!1.17e-14!33;CL:0000047!1.17e-14!33;CL:0000031!1.17e-14!33;CL:0000404!1.17e-14!33;CL:0000055!8.37e-12!50;CL:0000393!1.57e-10!39;CL:0000211!1.57e-10!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.33e-20,23;CL:0000337,1.33e-20,23;CL:0002319,3.10e-15,43;CL:0000221,1.28e-14,44;CL:0000133,1.28e-14,44;CL:0000540,1.89e-14,33;CL:0000047,1.89e-14,33;CL:0000031,1.89e-14,33;CL:0000404,1.89e-14,33;CL:0000393,9.33e-11,39;CL:0000211,9.33e-11,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.48e-35!73;UBERON:0005743!1.48e-35!73;UBERON:0000073!4.04e-34!75;UBERON:0001016!4.04e-34!75;UBERON:0002346!2.06e-29!71;UBERON:0003075!2.06e-29!71;UBERON:0007284!2.06e-29!71;UBERON:0001049!1.29e-28!52;UBERON:0005068!1.29e-28!52;UBERON:0006241!1.29e-28!52;UBERON:0007135!1.29e-28!52;UBERON:0004121!2.80e-28!102;UBERON:0000924!2.80e-28!102;UBERON:0006601!2.80e-28!102;UBERON:0000033!2.38e-27!63;UBERON:0000955!7.46e-27!50;UBERON:0006238!7.46e-27!50;UBERON:0002616!5.38e-26!49;UBERON:0003056!2.45e-23!49;UBERON:0002020!2.31e-22!34;UBERON:0003080!2.80e-21!40;UBERON:0002780!1.60e-20!39;UBERON:0001890!1.60e-20!39;UBERON:0006240!1.60e-20!39;UBERON:0002791!1.09e-18!29;UBERON:0003528!1.09e-18!29;UBERON:0001893!1.09e-18!29;UBERON:0000956!4.25e-13!21;UBERON:0001869!4.25e-13!21;UBERON:0000203!4.25e-13!21;UBERON:0000153!7.94e-13!94;UBERON:0007811!9.44e-13!86;UBERON:0002619!7.48e-11!17;UBERON:0003076!9.40e-08!12;UBERON:0003057!9.40e-08!12;UBERON:0002021!3.41e-07!10;UBERON:0000411!3.41e-07!10;UBERON:0001950!3.41e-07!10;UBERON:0002420!7.99e-07!8;UBERON:0007245!7.99e-07!8;UBERON:0010009!7.99e-07!8;UBERON:0010011!7.99e-07!8;UBERON:0000454!7.99e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.34e-39,73;UBERON:0000073,2.41e-38,54;UBERON:0001016,1.62e-37,75;UBERON:0002346,2.66e-37,64;UBERON:0003075,2.66e-37,64;UBERON:0007284,2.66e-37,64;UBERON:0001049,1.33e-36,52;UBERON:0005068,1.33e-36,52;UBERON:0006241,1.33e-36,52;UBERON:0007135,1.33e-36,52;UBERON:0004121,6.37e-33,95;UBERON:0000924,6.37e-33,95;UBERON:0006601,6.37e-33,95;UBERON:0000955,1.15e-31,47;UBERON:0006238,1.15e-31,47;UBERON:0010371,4.18e-31,73;UBERON:0002616,1.57e-30,46;UBERON:0002020,6.72e-30,34;UBERON:0003056,1.01e-29,49;UBERON:0003080,9.09e-28,40;UBERON:0002780,9.65e-27,39;UBERON:0001890,9.65e-27,39;UBERON:0006240,9.65e-27,39;UBERON:0003528,6.92e-25,29;UBERON:0002791,6.92e-25,29;UBERON:0001893,6.92e-25,29;UBERON:0010314,2.88e-20,92;UBERON:0000956,2.91e-17,21;UBERON:0001869,2.91e-17,21;UBERON:0000203,2.91e-17,21;UBERON:0002619,3.32e-14,17;UBERON:0002021,3.11e-09,10;UBERON:0000411,3.11e-09,10;UBERON:0001950,3.11e-09,10;UBERON:0003076,6.47e-09,12;UBERON:0003057,6.47e-09,12;UBERON:0002420,9.87e-09,8;UBERON:0007245,9.87e-09,8;UBERON:0010009,9.87e-09,8;UBERON:0010011,9.87e-09,8;UBERON:0000454,9.87e-09,8;UBERON:0000025,1.30e-07,114;UBERON:0002240,7.70e-07,6;UBERON:0005174,7.70e-07,6;UBERON:0001137,7.70e-07,6
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,2.8343270329458,4.83309602015838,2.91644848611425,0.979904951377538,1.43752564364972,0,0,0,0.257259436035947,0,0,11.3297218081375,16.398720357433,9.50747105259269,0.338844532069132,0,0,0,0,5.09320187881288,10.7581125490035,7.46565208621039,7.56033254657468,6.94072372459561,12.5686433137674,13.4729809980484,7.22695715368229,6.22995561618536,5.51531271966013,3.30347642998166,8.55505165170758,10.2916377281683,14.6393779380515,15.4614117688072,8.85552729946492,12.5632349550621,5.06486349028512,10.0846843532695,10.0173719061047,11.10499110233,9.87917062874093,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.693941307064543,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0,0,0.161766849947409,0.220841518460394,0,0,7.90508151931177,5.02672096352292,0,0,0,0,11.9832511523858,12.3525162761029,16.3350657746724,9.56033761057521,5.62574006126727,8.72709787150152,8.59878694259116,1.12023300235348,0,0,0.420883711772948,2.73252930221678,2.5289231487682,1.26043490863744,1.20563854268572,1.7009124787832,1.5373646434182,2.06143794031403,1.03481348295606,0.431135985865684,1.13463648100692,1.05570674498369,1.31517439456545,0.834141747676794,0,0.411564272815887,0.199034266818493,0,0,0,0,0.703578179943289,0.180062061461015,0,0,0.462801338662135,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0.324275238183423,0.146199987425332,0,0,14.7202963994889,9.8788427884113,0,0,0.213288250535234,0.232236671860439,0.644337306610467,0.403367049246685,0.444756087689741,0.190225626112559,0,0.494096864172033,0,0.198956472041151,0.38992817423824,0,0,0,0.569003702859245,0.799739588268102,1.1270773567308,0.407302655690628,0.387904974335251,0.420814919341911,0.0632365371242573,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.488894929326078,0.339490171550376,0.469380496577004,0,0,0,0.157635144106191,0,0,0,0.345369963731791,0.144649058581512,0,0,0,0,8.83028244932856,6.68106613575558,0,0,0.94652465824877,0.390438744296638,1.50796378412959,0.716906393857656,0.668396022247182,0,1.21443210502468,0.584511715822624,0.790575555893047,21.2072068838393,0.141940085208269,3.5613120733451,1.62886959353576,0.329940245945071,0,1.21390318077491,0,0.188605079755898,0,0,0,0,0,0,0,2.06271086496374,0,3.06103859853227,3.23396709456886,1.28602221018955,1.59606210278046,1.96205699362278,0.658196082408484,1.8267896946876,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0.291480836629851,8.52956389248344,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,1.01659733563424,0.216010681643603,0.418176592028937,0.218362563746178,0.134864346384821,0.165306911450672,0,0.259229946583586,0,0,0,0,0.194451188344048,0.387479470433193,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0,0,0.965947970160952,0.375364950902364,0.183151624267265,0,0,11.2950368523413,10.5874804396651,11.4579102687879,7.38968684077857,8.90607275701835,4.5323633843382,8.77529250301348,6.75481804836331,6.34399372577886,9.31968561153276,0.518936737920883,1.99512436700516,2.56100408631201,2.67417388775123,1.25767897576789,1.83843508450014,2.889207461421,2.47242068686673,1.60459604795908,1.76888048234658,1.01391719956096,2.82939512079114,1.31098110457835,2.30490548657529,1.49332219284595,3.33405583898152,2.20180219295225,2.31491064556446,2.06042950401653,1.61918812147837,1.71434626192708,0.887379030796687,0.715308569841963,1.45346416632329,1.88218760830661,1.94613598150856,1.82927972872773,1.05227884575137,2.03706170768793,4.48913817326191,2.60997039873183,1.47756723563345,1.22769312950907,1.39443157067369,1.73615949883027,6.99469618226249,2.8071793013449,2.36358159453128,0.956441660344217,0.441182838239031,0.231867835620421
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,2.8343270329458,4.83309602015838,2.91644848611425,0.979904951377538,1.43752564364972,0,0,0,0.257259436035947,0,0,11.3297218081375,16.398720357433,9.50747105259269,0.338844532069132,0,0,0,0,5.09320187881288,10.7581125490035,7.46565208621039,7.56033254657468,6.94072372459561,12.5686433137674,13.4729809980484,7.22695715368229,6.22995561618536,5.51531271966013,3.30347642998166,8.55505165170758,10.2916377281683,14.6393779380515,15.4614117688072,8.85552729946492,12.5632349550621,5.06486349028512,10.0846843532695,10.0173719061047,11.10499110233,9.87917062874093,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.693941307064543,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0,0,0.161766849947409,0.220841518460394,0,0,7.90508151931177,5.02672096352292,0,0,0,0,11.9832511523858,12.3525162761029,16.3350657746724,9.56033761057521,5.62574006126727,8.72709787150152,8.59878694259116,1.12023300235348,0,0,0.420883711772948,2.73252930221678,2.5289231487682,1.26043490863744,1.20563854268572,1.7009124787832,1.5373646434182,2.06143794031403,1.03481348295606,0.431135985865684,1.13463648100692,1.05570674498369,1.31517439456545,0.834141747676794,0,0.411564272815887,0.199034266818493,0,0,0,0,0.703578179943289,0.180062061461015,0,0,0.462801338662135,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0.324275238183423,0.146199987425332,0,0,14.7202963994889,9.8788427884113,0,0,0.213288250535234,0.232236671860439,0.644337306610467,0.403367049246685,0.444756087689741,0.190225626112559,0,0.494096864172033,0,0.198956472041151,0.38992817423824,0,0,0,0.569003702859245,0.799739588268102,1.1270773567308,0.407302655690628,0.387904974335251,0.420814919341911,0.0632365371242573,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.488894929326078,0.339490171550376,0.469380496577004,0,0,0,0.157635144106191,0,0,0,0.345369963731791,0.144649058581512,0,0,0,0,8.83028244932856,6.68106613575558,0,0,0.94652465824877,0.390438744296638,1.50796378412959,0.716906393857656,0.668396022247182,0,1.21443210502468,0.584511715822624,0.790575555893047,21.2072068838393,0.141940085208269,3.5613120733451,1.62886959353576,0.329940245945071,0,1.21390318077491,0,0.188605079755898,0,0,0,0,0,0,0,2.06271086496374,0,3.06103859853227,3.23396709456886,1.28602221018955,1.59606210278046,1.96205699362278,0.658196082408484,1.8267896946876,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0.291480836629851,8.52956389248344,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,1.01659733563424,0.216010681643603,0.418176592028937,0.218362563746178,0.134864346384821,0.165306911450672,0,0.259229946583586,0,0,0,0,0.194451188344048,0.387479470433193,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0,0,0.965947970160952,0.375364950902364,0.183151624267265,0,0,11.2950368523413,10.5874804396651,11.4579102687879,7.38968684077857,8.90607275701835,4.5323633843382,8.77529250301348,6.75481804836331,6.34399372577886,9.31968561153276,0.518936737920883,1.99512436700516,2.56100408631201,2.67417388775123,1.25767897576789,1.83843508450014,2.889207461421,2.47242068686673,1.60459604795908,1.76888048234658,1.01391719956096,2.82939512079114,1.31098110457835,2.30490548657529,1.49332219284595,3.33405583898152,2.20180219295225,2.31491064556446,2.06042950401653,1.61918812147837,1.71434626192708,0.887379030796687,0.715308569841963,1.45346416632329,1.88218760830661,1.94613598150856,1.82927972872773,1.05227884575137,2.03706170768793,4.48913817326191,2.60997039873183,1.47756723563345,1.22769312950907,1.39443157067369,1.73615949883027,6.99469618226249,2.8071793013449,2.36358159453128,0.956441660344217,0.441182838239031,0.231867835620421
|short_description=p3@Lrrc4b
|short_description=p3@Lrrc4b
}}
}}

Latest revision as of 19:13, 26 September 2015

Short description:p3@Lrrc4b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Lrrc4b_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -180bp_to_ENSMUST00000127790_5end
EntrezGene:Lrrc4b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Lrrc4b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C311.33
Mouse Granule cells, donor2.CNhs12357.11731-123E316.40
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E810.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.47
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.56
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.47
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.23
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.23
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.08
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.10
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.88
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.91
cerebellum, neonate N30.CNhs11135.1395-42I25.03
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.98
corpus striatum, adult.CNhs10487.19-21D812.35
corpus striatum, neonate N00.CNhs11226.630-43F116.34
cortex, adult.CNhs10473.12-14D59.56
cortex, neonate N30.CNhs11107.1392-42F25.63
diencephalon, adult.CNhs10482.20-12F28.73
diencephalon, neonate N30.CNhs11201.1388-42B28.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E814.72
hippocampus, neonate N00.CNhs11228.627-43G19.88
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.83
medulla oblongata, neonate N30.CNhs11200.1396-42A36.68
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I921.21
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C73.23
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C98.53
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A311.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I56.99
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.33e-2023
neuroblast (sensu Vertebrata)1.33e-2023
neural cell3.10e-1543
ectodermal cell1.28e-1444
neurectodermal cell1.28e-1444
neuron1.89e-1433
neuronal stem cell1.89e-1433
neuroblast1.89e-1433
electrically signaling cell1.89e-1433
electrically responsive cell9.33e-1139
electrically active cell9.33e-1139

Uber anatomy
Ontology termp-valuen
central nervous system3.34e-3973
regional part of nervous system2.41e-3854
nervous system1.62e-3775
neurectoderm2.66e-3764
neural plate2.66e-3764
presumptive neural plate2.66e-3764
neural tube1.33e-3652
neural rod1.33e-3652
future spinal cord1.33e-3652
neural keel1.33e-3652
ectoderm-derived structure6.37e-3395
ectoderm6.37e-3395
presumptive ectoderm6.37e-3395
brain1.15e-3147
future brain1.15e-3147
ecto-epithelium4.18e-3173
regional part of brain1.57e-3046
gray matter6.72e-3034
pre-chordal neural plate1.01e-2949
anterior neural tube9.09e-2840
regional part of forebrain9.65e-2739
forebrain9.65e-2739
future forebrain9.65e-2739
brain grey matter6.92e-2529
regional part of telencephalon6.92e-2529
telencephalon6.92e-2529
structure with developmental contribution from neural crest2.88e-2092
cerebral cortex2.91e-1721
cerebral hemisphere2.91e-1721
pallium2.91e-1721
regional part of cerebral cortex3.32e-1417
occipital lobe3.11e-0910
visual cortex3.11e-0910
neocortex3.11e-0910
posterior neural tube6.47e-0912
chordal neural plate6.47e-0912
basal ganglion9.87e-098
nuclear complex of neuraxis9.87e-098
aggregate regional part of brain9.87e-098
collection of basal ganglia9.87e-098
cerebral subcortex9.87e-098
tube1.30e-07114
spinal cord7.70e-076
dorsal region element7.70e-076
dorsum7.70e-076
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