Personal tools

FFCP PHASE1:Mm9::chrX:117403928..117403942,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=245578
|EntrezGene=245578
|HGNC=
|HGNC=
|MCL_coexpression_id=237
|TSSclassifier=NA
|UniProt=B1AZR7
|UniProt=B1AZR7
|association_with_transcript=0bp_to_NM_001081385,uc009uee.1,uc009uef.1_5end
|association_with_transcript=0bp_to_NM_001081385,uc009uee.1,uc009uef.1_5end
|cluster_id=chrX:117403928..117403942,+
|description=CAGE_peak_1_at_Pcdh11x_5end
|description=CAGE_peak_1_at_Pcdh11x_5end
|id=chrX:117403928..117403942,+
|id=chrX:117403928..117403942,+
|ontology_enrichment_celltype=CL:0000117!1.64e-10!23;CL:0000337!1.64e-10!23;CL:0000540!1.40e-07!33;CL:0000047!1.40e-07!33;CL:0000031!1.40e-07!33;CL:0000404!1.40e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.91e-11,23;CL:0000337,1.91e-11,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.71e-18!71;UBERON:0003075!3.71e-18!71;UBERON:0007284!3.71e-18!71;UBERON:0000033!4.86e-18!63;UBERON:0001049!9.44e-18!52;UBERON:0005068!9.44e-18!52;UBERON:0006241!9.44e-18!52;UBERON:0007135!9.44e-18!52;UBERON:0001017!1.03e-17!73;UBERON:0005743!1.03e-17!73;UBERON:0000073!2.39e-17!75;UBERON:0001016!2.39e-17!75;UBERON:0004121!6.84e-17!102;UBERON:0000924!6.84e-17!102;UBERON:0006601!6.84e-17!102;UBERON:0003056!9.00e-17!49;UBERON:0000955!2.52e-16!50;UBERON:0006238!2.52e-16!50;UBERON:0002616!1.11e-15!49;UBERON:0003080!1.79e-14!40;UBERON:0002020!3.49e-14!34;UBERON:0002780!7.34e-14!39;UBERON:0001890!7.34e-14!39;UBERON:0006240!7.34e-14!39;UBERON:0002791!7.57e-11!29;UBERON:0003528!7.57e-11!29;UBERON:0001893!7.57e-11!29;UBERON:0000153!4.40e-08!94;UBERON:0000025!1.28e-07!114;UBERON:0002021!1.34e-07!10;UBERON:0000411!1.34e-07!10;UBERON:0001950!1.34e-07!10;UBERON:0000468!1.41e-07!333;UBERON:0004111!1.86e-07!122;UBERON:0007811!4.19e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.59e-21,54;UBERON:0002346,1.75e-20,64;UBERON:0003075,1.75e-20,64;UBERON:0007284,1.75e-20,64;UBERON:0001049,2.50e-19,52;UBERON:0005068,2.50e-19,52;UBERON:0006241,2.50e-19,52;UBERON:0007135,2.50e-19,52;UBERON:0003056,7.86e-18,49;UBERON:0010314,4.07e-17,92;UBERON:0010371,4.51e-17,73;UBERON:0001017,7.97e-17,73;UBERON:0000955,1.13e-15,47;UBERON:0006238,1.13e-15,47;UBERON:0001016,1.15e-15,75;UBERON:0003080,2.74e-15,40;UBERON:0002616,5.47e-15,46;UBERON:0002020,6.19e-15,34;UBERON:0002780,1.28e-14,39;UBERON:0001890,1.28e-14,39;UBERON:0006240,1.28e-14,39;UBERON:0004121,2.70e-14,95;UBERON:0000924,2.70e-14,95;UBERON:0006601,2.70e-14,95;UBERON:0003528,2.71e-11,29;UBERON:0002791,2.71e-11,29;UBERON:0001893,2.71e-11,29;UBERON:0002021,3.12e-08,10;UBERON:0000411,3.12e-08,10;UBERON:0001950,3.12e-08,10;UBERON:0000956,8.90e-07,21;UBERON:0001869,8.90e-07,21;UBERON:0000203,8.90e-07,21
|phase1_expression=6.08565618998217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.52781385981954,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.58328969722285,0.139986421625363,0,0,0,0,1.02903774414379,2.29226751951005,9.7977697532714,14.7691016427506,20.6306481916093,18.3811107016792,0,1.77858959222228,0,0.988866362566974,0,1.49800055259202,1.53687322128622,2.17748185847803,1.35005938331691,1.68259969081106,39.4198358477249,33.3511496836936,6.61450315760752,3.1629005436018,3.67687514644008,50.6533052597188,24.7713435885264,27.3419629196113,16.0901271030836,15.3699241252048,20.3156214517136,10.8881369610539,32.0774687718058,31.1708425464693,112.548119650941,95.389026135399,49.3958531437047,0.984440513331393,0.982430281388212,0,0,0,0.539703191637817,0.649776417447669,0,1.96622188184453,0,0,0,11.5491604216878,0,0,0,0,0,0,0.5709193985953,1.29468941823586,0.742210695324124,3.81667718885499,2.13125834818499,0.461230994512117,1.95939432718409,2.58695155698551,0.125666591329675,0.247194967734374,1.87979163995885,0,4.52947179852746,0.883366073841574,1.93950101254089,0,2.63502717310392,3.35114730901528,0,0,0,0,26.3631525352488,22.4175295381127,44.8586037042926,15.6441888173049,17.9000820131231,24.3112012134685,28.5544622999253,8.65634592727688,0.622034853050465,0,1.47309299120532,4.94457683258274,4.82794419310293,7.38254732201932,10.3986324306643,13.3351538336603,11.7864622662062,13.0245397138023,7.24369438069244,0.646703978798527,4.34943984385984,7.03804496655795,5.47989331068937,8.61946472599353,10.0993128291428,4.32142486456681,14.927570011387,0,0,0,4.97101854085205,4.69052119962192,5.58192390529146,5.91861838963026,2.55793501271625,3.85667782218446,2.09280550275367,1.3413670069981,2.21854150497622,2.30383789878873,0.492502392237286,0.648550476366846,0.292399974850665,0.439100230582101,0.671032093801859,9.88362758251398,6.79170441703277,0,0,5.75878276445132,10.6828869055802,5.28356591420583,4.03367049246685,1.77902435075896,1.33157938278791,0,0.494096864172033,1.00534083520108,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.569003702859245,2.51346727741403,1.1270773567308,1.83286195060783,1.55161989734101,0.911765658574141,0.379419222745544,0,0,0,0.296452627087149,1.66845105716094,2.94838492669805,0.224862112384854,0.811440485554012,0,0.25462585178142,0.863088412352432,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.358794827043824,0,0.554259570499814,10.9905018826881,10.4297584922897,5.7713329163564,2.58159273117352,2.01007508930179,1.19021820443007,1.95133647857799,1.41871629695572,0.664394068946325,0.637819074629948,0.163863314715738,0.690739927463582,0.289298117163023,0,0,0.491764273019036,0.827810238914197,23.7614873181932,22.6218555122952,0,0.252470927204373,2.2085575359138,0.780877488593277,0.215423397732799,0.955875191810208,0.891194696329576,0.849229592366497,0.404810701674894,0.584511715822624,0.395287777946524,32.1321316421807,2.55492153374884,3.38324646967785,12.5422958702254,6.92874516484649,0,1.94224508923985,1.209294227859,0.943025398779491,1.77181135728464,1.84461088766356,2.06742634534577,0.727067458955011,1.06949213515416,0.316036757935816,0,0,5.10659408630682,9.90336017172206,2.45781499187234,11.1455258216428,14.3645589250242,8.02659679209317,8.22745103010605,3.65357938937519,0,0,1.10264199027481,0.49465875882444,1.45317984026315,0.904693873922338,0.596861720015682,0.492422699235184,0,23.9198639593557,0,0.82554747185289,0.370389054739423,0.188368457004691,0,0,0,0,0,0,16.449471666219,10.9792512248498,6.48032044930808,3.97267762427491,3.05707589244649,2.02296519577231,1.90102948168273,0.523511883968059,0.259229946583586,0,0,6.27969493384711,5.12921320417003,7.38914515707381,3.35815541042101,2.87225413334323,3.0512882047896,1.0416350787516,1.36317147753424,0.241584120826006,0,0.316011120628178,1.41907650703115,1.43795340030758,0.389762468933385,0.358053391334963,0,0,0,0.302899349844443,0,0.201652370273681,0,0,0,0.226730383615211,0,0,0,2.31827512838629,1.31377732815827,9.89018771043231,0.857473516316263,0.501572104035363,55.3456805764725,43.7308974681818,42.9671635079547,35.5736087451433,23.2928056722018,24.1726047164704,25.6508550088086,24.7676661773321,24.9228324941313,17.6038505995619,1.55681021376265,4.78829848081237,14.000155671839,7.05009479498053,5.8691685535835,6.43452279575049,11.3345831178824,9.47761263298913,8.3438994493872,10.6132828940795,8.87177549615839,11.3175804831646,8.5213771797593,8.77144587946709,10.6829972257441,7.1444053692461,8.92309309775387,8.48800570040302,8.24171801606613,9.71512872887022,12.6861623382604,7.45398385869217,6.91464950847231,7.84870649814574,11.0107975085937,7.86915853392591,8.41468675214754,9.99664903463803,9.64209208305619,8.97827634652382,10.914421667424,9.85044823755635,8.59385190656348,11.0005157242036,8.8737041051325,10.4920442733937,10.9947855969342,8.59484216193193,7.46024495068489,2.64709702943419,3.2461496986859
|phase1_expression=6.08565618998217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.52781385981954,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.58328969722285,0.139986421625363,0,0,0,0,1.02903774414379,2.29226751951005,9.7977697532714,14.7691016427506,20.6306481916093,18.3811107016792,0,1.77858959222228,0,0.988866362566974,0,1.49800055259202,1.53687322128622,2.17748185847803,1.35005938331691,1.68259969081106,39.4198358477249,33.3511496836936,6.61450315760752,3.1629005436018,3.67687514644008,50.6533052597188,24.7713435885264,27.3419629196113,16.0901271030836,15.3699241252048,20.3156214517136,10.8881369610539,32.0774687718058,31.1708425464693,112.548119650941,95.389026135399,49.3958531437047,0.984440513331393,0.982430281388212,0,0,0,0.539703191637817,0.649776417447669,0,1.96622188184453,0,0,0,11.5491604216878,0,0,0,0,0,0,0.5709193985953,1.29468941823586,0.742210695324124,3.81667718885499,2.13125834818499,0.461230994512117,1.95939432718409,2.58695155698551,0.125666591329675,0.247194967734374,1.87979163995885,0,4.52947179852746,0.883366073841574,1.93950101254089,0,2.63502717310392,3.35114730901528,0,0,0,0,26.3631525352488,22.4175295381127,44.8586037042926,15.6441888173049,17.9000820131231,24.3112012134685,28.5544622999253,8.65634592727688,0.622034853050465,0,1.47309299120532,4.94457683258274,4.82794419310293,7.38254732201932,10.3986324306643,13.3351538336603,11.7864622662062,13.0245397138023,7.24369438069244,0.646703978798527,4.34943984385984,7.03804496655795,5.47989331068937,8.61946472599353,10.0993128291428,4.32142486456681,14.927570011387,0,0,0,4.97101854085205,4.69052119962192,5.58192390529146,5.91861838963026,2.55793501271625,3.85667782218446,2.09280550275367,1.3413670069981,2.21854150497622,2.30383789878873,0.492502392237286,0.648550476366846,0.292399974850665,0.439100230582101,0.671032093801859,9.88362758251398,6.79170441703277,0,0,5.75878276445132,10.6828869055802,5.28356591420583,4.03367049246685,1.77902435075896,1.33157938278791,0,0.494096864172033,1.00534083520108,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.569003702859245,2.51346727741403,1.1270773567308,1.83286195060783,1.55161989734101,0.911765658574141,0.379419222745544,0,0,0,0.296452627087149,1.66845105716094,2.94838492669805,0.224862112384854,0.811440485554012,0,0.25462585178142,0.863088412352432,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.358794827043824,0,0.554259570499814,10.9905018826881,10.4297584922897,5.7713329163564,2.58159273117352,2.01007508930179,1.19021820443007,1.95133647857799,1.41871629695572,0.664394068946325,0.637819074629948,0.163863314715738,0.690739927463582,0.289298117163023,0,0,0.491764273019036,0.827810238914197,23.7614873181932,22.6218555122952,0,0.252470927204373,2.2085575359138,0.780877488593277,0.215423397732799,0.955875191810208,0.891194696329576,0.849229592366497,0.404810701674894,0.584511715822624,0.395287777946524,32.1321316421807,2.55492153374884,3.38324646967785,12.5422958702254,6.92874516484649,0,1.94224508923985,1.209294227859,0.943025398779491,1.77181135728464,1.84461088766356,2.06742634534577,0.727067458955011,1.06949213515416,0.316036757935816,0,0,5.10659408630682,9.90336017172206,2.45781499187234,11.1455258216428,14.3645589250242,8.02659679209317,8.22745103010605,3.65357938937519,0,0,1.10264199027481,0.49465875882444,1.45317984026315,0.904693873922338,0.596861720015682,0.492422699235184,0,23.9198639593557,0,0.82554747185289,0.370389054739423,0.188368457004691,0,0,0,0,0,0,16.449471666219,10.9792512248498,6.48032044930808,3.97267762427491,3.05707589244649,2.02296519577231,1.90102948168273,0.523511883968059,0.259229946583586,0,0,6.27969493384711,5.12921320417003,7.38914515707381,3.35815541042101,2.87225413334323,3.0512882047896,1.0416350787516,1.36317147753424,0.241584120826006,0,0.316011120628178,1.41907650703115,1.43795340030758,0.389762468933385,0.358053391334963,0,0,0,0.302899349844443,0,0.201652370273681,0,0,0,0.226730383615211,0,0,0,2.31827512838629,1.31377732815827,9.89018771043231,0.857473516316263,0.501572104035363,55.3456805764725,43.7308974681818,42.9671635079547,35.5736087451433,23.2928056722018,24.1726047164704,25.6508550088086,24.7676661773321,24.9228324941313,17.6038505995619,1.55681021376265,4.78829848081237,14.000155671839,7.05009479498053,5.8691685535835,6.43452279575049,11.3345831178824,9.47761263298913,8.3438994493872,10.6132828940795,8.87177549615839,11.3175804831646,8.5213771797593,8.77144587946709,10.6829972257441,7.1444053692461,8.92309309775387,8.48800570040302,8.24171801606613,9.71512872887022,12.6861623382604,7.45398385869217,6.91464950847231,7.84870649814574,11.0107975085937,7.86915853392591,8.41468675214754,9.99664903463803,9.64209208305619,8.97827634652382,10.914421667424,9.85044823755635,8.59385190656348,11.0005157242036,8.8737041051325,10.4920442733937,10.9947855969342,8.59484216193193,7.46024495068489,2.64709702943419,3.2461496986859
|short_description=p1@Pcdh11x
|short_description=p1@Pcdh11x
}}
}}

Latest revision as of 13:27, 1 October 2015

Short description:p1@Pcdh11x
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pcdh11x_5end
Coexpression cluster:MCL_coexpression_mm9:237
Association with transcript: 0bp_to_NM_001081385, uc009uee.1, uc009uef.1_5end
EntrezGene:Pcdh11x
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pcdh11x

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.80
Mouse Granule cells, donor1.CNhs12131.11713-123C314.77
Mouse Granule cells, donor2.CNhs12357.11731-123E320.63
Mouse Granule cells, donor3.CNhs12108.11636-122C718.38
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F139.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D533.35
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D350.65
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D727.34
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D820.32
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E532.08
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I631.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6112.55
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F695.39
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E149.40
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C53.82
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F54.53
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A426.36
corpus striatum, adult.CNhs10487.19-21D822.42
corpus striatum, neonate N00.CNhs11226.630-43F144.86
cortex, adult.CNhs10473.12-14D515.64
cortex, neonate N30.CNhs11107.1392-42F217.90
diencephalon, adult.CNhs10482.20-12F224.31
diencephalon, neonate N30.CNhs11201.1388-42B228.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.66
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C64.94
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C97.38
eyeball, embryo E17.CNhs11023.1261-18D410.40
eyeball, neonate N00.CNhs11207.633-15C613.34
eyeball, neonate N01.CNhs11140.1532-43E711.79
eyeball, neonate N02.CNhs11205.1551-44G813.02
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H24.35
forelimb, embryo E13.CNhs10589.384-1E27.04
forelimb, embryo E14.CNhs10577.413-26A85.48
forelimb, embryo E15.CNhs11007.437-20E78.62
forelimb, embryo E17.CNhs10598.1517-43C410.10
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I614.93
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.97
heart, embryo E12.CNhs11015.353-12F54.69
heart, embryo E13.CNhs11013.376-3I95.58
heart, embryo E14.CNhs10597.403-26D45.92
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C63.86
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E32.22
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E89.88
hippocampus, neonate N00.CNhs11228.627-43G16.79
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I55.76
intestine, embryo E13.CNhs11010.381-16D510.68
intestine, embryo E15.CNhs10602.976-16D85.28
intestine, embryo E16.CNhs10585.463-22H44.03
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F82.51
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G210.99
lung, embryo E14.CNhs10604.404-26F810.43
lung, embryo E15.CNhs11020.432-17C55.77
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C223.76
medulla oblongata, neonate N30.CNhs11200.1396-42A322.62
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I932.13
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I412.54
oviduct, adult pregnant day01.CNhs10500.988-6G66.93
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E69.90
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A511.15
pituitary gland, embryo E15.CNhs10592.427-16B914.36
pituitary gland, embryo E16.CNhs11036.449-43F68.03
pituitary gland, embryo E17.CNhs11039.1265-44F58.23
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C923.92
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E316.45
stomach, embryo E15.CNhs10603.1252-16G810.98
stomach, embryo E16.CNhs11022.459-17D46.48
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B82.02
stomach, neonate N07.CNhs11210.718-18A91.90
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F56.28
testis, embryo E15.CNhs11034.443-27C55.13
testis, embryo E16.CNhs11033.470-26G57.39
testis, embryo E17.CNhs11029.486-18I53.36
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B73.05
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E59.89
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A155.35
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A243.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A342.97
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D735.57
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.29
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.17
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A625.65
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A724.77
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.92
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.60
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H214.00
whole body, embryo E14.5.CNhs10578.420-27D27.05
whole body, embryo E14.CNhs10519.395-14B15.87
whole body, embryo E16.CNhs10514.453-14F26.43
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.68
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.92
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.72
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.45
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.85
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.41
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.64
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.85
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.00
whole body, embryo E17.5.CNhs10513.490-9F98.87
whole body, embryo E17.CNhs10517.475-3I510.49
whole body, embryo E18.CNhs10516.493-3B310.99
whole body, neonate N00.CNhs10525.657-19C28.59
whole body, neonate N01.CNhs10576.659-23C67.46
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.91e-1123
neuroblast (sensu Vertebrata)1.91e-1123

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.59e-2154
neurectoderm1.75e-2064
neural plate1.75e-2064
presumptive neural plate1.75e-2064
neural tube2.50e-1952
neural rod2.50e-1952
future spinal cord2.50e-1952
neural keel2.50e-1952
pre-chordal neural plate7.86e-1849
structure with developmental contribution from neural crest4.07e-1792
ecto-epithelium4.51e-1773
central nervous system7.97e-1773
brain1.13e-1547
future brain1.13e-1547
nervous system1.15e-1575
anterior neural tube2.74e-1540
regional part of brain5.47e-1546
gray matter6.19e-1534
regional part of forebrain1.28e-1439
forebrain1.28e-1439
future forebrain1.28e-1439
ectoderm-derived structure2.70e-1495
ectoderm2.70e-1495
presumptive ectoderm2.70e-1495
brain grey matter2.71e-1129
regional part of telencephalon2.71e-1129
telencephalon2.71e-1129
occipital lobe3.12e-0810
visual cortex3.12e-0810
neocortex3.12e-0810
cerebral cortex8.90e-0721
cerebral hemisphere8.90e-0721
pallium8.90e-0721
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:117403928..117403942,%2B&oldid=4305161"