FFCP PHASE1:Mm9::chr9:78463308..78463316,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=235505 | |EntrezGene=235505 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8R422,A6MDD3 | |UniProt=Q8R422,A6MDD3 | ||
|association_with_transcript=-36bp_to_ENSMUST00000093812,NM_153098,uc009qur.2_5end | |association_with_transcript=-36bp_to_ENSMUST00000093812,NM_153098,uc009qur.2_5end | ||
|cluster_id=chr9:78463308..78463316,+ | |||
|description=CAGE_peak_8_at_Cd109_5end | |description=CAGE_peak_8_at_Cd109_5end | ||
|id=chr9:78463308..78463316,+ | |id=chr9:78463308..78463316,+ | ||
|ontology_enrichment_celltype=CL:0000333!8.41e-16!10;CL:0000095!8.41e-16!10;CL:0000243!8.41e-16!10;CL:0000123!8.41e-16!10;CL:0000125!8.41e-16!10;CL:0000030!8.41e-16!10;CL:0000339!8.41e-16!10;CL:0002453!3.11e-11!8;CL:0000128!1.15e-10!6;CL:0000126!1.15e-10!6;CL:0000127!1.15e-10!6;CL:0000055!4.76e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,6.24e-27,10;CL:0000095,6.24e-27,10;CL:0000243,6.24e-27,10;CL:0000123,6.24e-27,10;CL:0000125,6.24e-27,10;CL:0000030,6.24e-27,10;CL:0000339,6.24e-27,10;CL:0000128,2.48e-20,6;CL:0000126,2.48e-20,6;CL:0000127,2.48e-20,6;CL:0002603,6.78e-16,2;CL:0000217,9.49e-16,2;CL:0000328,9.49e-16,2;CL:0002573,9.49e-16,2;CL:0002376,9.49e-16,2;CL:0000218,9.49e-16,2;CL:0000692,9.49e-16,2;CL:0002377,9.49e-16,2;CL:0002375,9.49e-16,2;CL:0002605,1.33e-15,2;CL:0002604,1.33e-15,2;CL:0002453,1.45e-15,8;CL:0000215,5.71e-11,3;CL:0002319,4.30e-07,43;CL:0000221,5.93e-07,44;CL:0000133,5.93e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000011!1.75e-08!3;UBERON:0005418!3.96e-08!5;UBERON:0002472!3.96e-08!5;UBERON:0008784!3.96e-08!5;UBERON:0006058!3.96e-08!5;UBERON:0004709!3.96e-08!5;UBERON:0005420!3.96e-08!5;UBERON:0006057!3.96e-08!5;UBERON:0000978!3.96e-08!5;UBERON:0002103!3.96e-08!5;UBERON:0000376!3.96e-08!5;UBERON:0000154!3.96e-08!5;UBERON:0005730!3.96e-08!5;UBERON:0000010!4.40e-08!11;UBERON:0002529!9.18e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.23e-08,4;UBERON:0002680,1.23e-08,4;UBERON:0001895,1.23e-08,4;UBERON:0010092,1.23e-08,4;UBERON:0006215,1.23e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,1.56478268869608,0.436050312760893,0.219686182734472,1.36100929351998,0.279972843250725,0,0,0,0,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984440513331393,1.43585964202892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0.477937595905104,0.445597348164788,0.849229592366497,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0.161464426695906,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,1.56478268869608,0.436050312760893,0.219686182734472,1.36100929351998,0.279972843250725,0,0,0,0,0,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984440513331393,1.43585964202892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0.477937595905104,0.445597348164788,0.849229592366497,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0.161464426695906,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p8@Cd109 | |short_description=p8@Cd109 | ||
}} | }} |
Latest revision as of 04:29, 27 September 2015
Short description: | p8@Cd109 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Cd109_5end |
Coexpression cluster: | NA |
Association with transcript: | -36bp_to_ENSMUST00000093812, NM_153098, uc009qur.2_5end |
EntrezGene: | Cd109 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 6.24e-27 | 10 |
neuron associated cell | 6.24e-27 | 10 |
glial cell (sensu Vertebrata) | 6.24e-27 | 10 |
neuron associated cell (sensu Vertebrata) | 6.24e-27 | 10 |
glial cell | 6.24e-27 | 10 |
glioblast | 6.24e-27 | 10 |
glioblast (sensu Vertebrata) | 6.24e-27 | 10 |
oligodendrocyte | 2.48e-20 | 6 |
macroglial cell | 2.48e-20 | 6 |
astrocyte | 2.48e-20 | 6 |
astrocyte of the cerebellum | 6.78e-16 | 2 |
insulating cell | 9.49e-16 | 2 |
myelin accumulating cell | 9.49e-16 | 2 |
Schwann cell | 9.49e-16 | 2 |
non-myelinating Schwann cell | 9.49e-16 | 2 |
myelinating Schwann cell;;Schwann cell | 9.49e-16 | 2 |
terminal Schwann cell | 9.49e-16 | 2 |
immature Schwann cell | 9.49e-16 | 2 |
Schwann cell precursor | 9.49e-16 | 2 |
astrocyte of the cerebral cortex | 1.33e-15 | 2 |
astrocyte of the hippocampus | 1.33e-15 | 2 |
oligodendrocyte precursor cell | 1.45e-15 | 8 |
barrier cell | 5.71e-11 | 3 |
neural cell | 4.30e-07 | 43 |
ectodermal cell | 5.93e-07 | 44 |
neurectodermal cell | 5.93e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.23e-08 | 4 |
regional part of metencephalon | 1.23e-08 | 4 |
metencephalon | 1.23e-08 | 4 |
future metencephalon | 1.23e-08 | 4 |
rhombic lip | 1.23e-08 | 4 |