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FFCP PHASE1:Mm9::chr7:17200307..17200370,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=232906
|EntrezGene=232906
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q91YM2,B2RTN5,Q3UVZ8,Q8CCL8
|UniProt=Q91YM2,B2RTN5,Q3UVZ8,Q8CCL8
|association_with_transcript=0bp_to_ENSMUST00000075845,NM_172739,uc009fhw.1_5end
|association_with_transcript=0bp_to_ENSMUST00000075845,NM_172739,uc009fhw.1_5end
|cluster_id=chr7:17200307..17200370,-
|description=CAGE_peak_2_at_Grlf1_5end
|description=CAGE_peak_2_at_Grlf1_5end
|id=chr7:17200307..17200370,-
|id=chr7:17200307..17200370,-
|ontology_enrichment_celltype=CL:0000117!3.95e-13!23;CL:0000337!3.95e-13!23;CL:0000540!1.72e-11!33;CL:0000047!1.72e-11!33;CL:0000031!1.72e-11!33;CL:0000404!1.72e-11!33;CL:0000393!1.23e-07!39;CL:0000211!1.23e-07!39
|ontology_enrichment_celltype=CL:0000117!3.95e-13!23;CL:0000337!3.95e-13!23;CL:0000540!1.72e-11!33;CL:0000047!1.72e-11!33;CL:0000031!1.72e-11!33;CL:0000404!1.72e-11!33;CL:0000393!1.23e-07!39;CL:0000211!1.23e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,3.94e-13,23;CL:0000337,3.94e-13,23;CL:0000540,1.71e-11,33;CL:0000047,1.71e-11,33;CL:0000031,1.71e-11,33;CL:0000404,1.71e-11,33;CL:0000393,1.23e-07,39;CL:0000211,1.23e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!3.68e-25!63;UBERON:0002346!1.54e-24!71;UBERON:0003075!1.54e-24!71;UBERON:0007284!1.54e-24!71;UBERON:0001017!3.51e-23!73;UBERON:0005743!3.51e-23!73;UBERON:0001049!1.25e-22!52;UBERON:0005068!1.25e-22!52;UBERON:0006241!1.25e-22!52;UBERON:0007135!1.25e-22!52;UBERON:0000955!4.66e-22!50;UBERON:0006238!4.66e-22!50;UBERON:0004121!4.79e-22!102;UBERON:0000924!4.79e-22!102;UBERON:0006601!4.79e-22!102;UBERON:0003056!4.90e-22!49;UBERON:0000073!9.16e-22!75;UBERON:0001016!9.16e-22!75;UBERON:0002616!1.67e-21!49;UBERON:0003080!4.90e-19!40;UBERON:0002780!2.47e-18!39;UBERON:0001890!2.47e-18!39;UBERON:0006240!2.47e-18!39;UBERON:0002020!1.32e-17!34;UBERON:0000153!2.50e-15!94;UBERON:0002791!3.22e-15!29;UBERON:0003528!3.22e-15!29;UBERON:0001893!3.22e-15!29;UBERON:0007811!7.12e-14!86;UBERON:0000025!5.50e-12!114;UBERON:0004111!3.05e-11!122;UBERON:0000956!1.01e-10!21;UBERON:0001869!1.01e-10!21;UBERON:0000203!1.01e-10!21;UBERON:0000468!3.25e-09!333;UBERON:0002619!7.05e-09!17;UBERON:0002021!9.30e-08!10;UBERON:0000411!9.30e-08!10;UBERON:0001950!9.30e-08!10;UBERON:0000479!2.96e-07!349;UBERON:0000922!7.43e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.94e-26,64;UBERON:0003075,9.94e-26,64;UBERON:0007284,9.94e-26,64;UBERON:0010314,1.12e-24,92;UBERON:0000073,4.13e-24,54;UBERON:0001017,3.49e-23,73;UBERON:0010371,7.43e-23,73;UBERON:0001049,1.25e-22,52;UBERON:0005068,1.25e-22,52;UBERON:0006241,1.25e-22,52;UBERON:0007135,1.25e-22,52;UBERON:0004121,2.02e-22,95;UBERON:0000924,2.02e-22,95;UBERON:0006601,2.02e-22,95;UBERON:0003056,4.87e-22,49;UBERON:0001016,9.11e-22,75;UBERON:0000955,6.39e-20,47;UBERON:0006238,6.39e-20,47;UBERON:0002616,2.23e-19,46;UBERON:0003080,4.88e-19,40;UBERON:0002780,2.46e-18,39;UBERON:0001890,2.46e-18,39;UBERON:0006240,2.46e-18,39;UBERON:0002020,1.32e-17,34;UBERON:0003528,3.21e-15,29;UBERON:0002791,3.21e-15,29;UBERON:0001893,3.21e-15,29;UBERON:0000025,5.49e-12,114;UBERON:0004111,3.04e-11,122;UBERON:0000956,1.00e-10,21;UBERON:0001869,1.00e-10,21;UBERON:0000203,1.00e-10,21;UBERON:0002619,7.03e-09,17;UBERON:0002021,9.28e-08,10;UBERON:0000411,9.28e-08,10;UBERON:0001950,9.28e-08,10;UBERON:0000479,3.49e-07,349
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1944,5.59205381778233,11.2738587736838,6.42921147989109,3.64008679005615,7.38914515707381,6.45799117388655,7.26511339610346,7.98029222791127,8.33308063001281,13.6317147753424,12.0792060413003,9.50499020650956,4.10814456816632,3.24360344464263,4.41657115808757,4.15746633528944,5.19177417435696,4.96703386953162,4.20684073319891,3.83992770653901,3.33189284828887,6.02033772574499,3.7305688500631,5.36018344068638,5.09922760693746,5.96072201126002,7.48210265930198,0.221985953374065,0.179427713218951,0.671538465456314,6.95482538515886,3.94133198447482,7.14291334642334,3.64426244434412,1.50471631210609,33.885110557024,29.9211403729665,34.3737308063638,26.980949627959,41.7900337060092,43.8128460486026,33.7511250115903,47.7340475417674,41.2359592175626,48.1517089929193,9.13328658740755,13.167820822234,9.21961471072325,8.265628380322,8.38452650511929,9.55986243940074,8.66762238426299,14.0103838922448,9.62757628775446,9.09709962349671,7.85785829659743,9.43131706930381,6.08669798554236,11.4605022804716,9.47685237767619,7.1444053692461,9.38663040153329,8.87382414133043,6.59337441285291,7.50714492685426,9.60033906679163,5.85670160325814,8.58370283810355,8.43009216467505,8.84628175904108,7.53070010235921,9.69518256225695,11.3119975918272,8.01244271690584,12.3451299764702,11.3889617399207,11.1310065084387,12.2769312950907,7.2820315357404,9.06661071611365,16.7373087218424,10.292990771598,6.44613162144895,10.7121465958552,5.29419405886837,9.27471342481686
|phase1_expression=9.76907967339243,2.09385244583617,2.27499619694768,1.51232105653415,0,3.52546471014969,4.43864017131499,2.96983643915625,3.801295498095,3.7450324211519,5.13653904676515,4.54701306273417,4.45121897821135,3.3219752919219,0.999329285446988,1.61980213911861,1.39912375625629,3.3123527362615,2.19383093769182,3.81950686618227,9.18467533631554,3.47518329203099,1.30599894569468,1.43993180514066,1.60586496747019,1.14846392823004,2.15380998079537,2.15471232685889,2.28028103347649,0.756090389279792,1.55211357458713,3.81018404075779,3.69038872550742,0,4.62162591602039,2.49351968037739,3.26670970019791,0,0,0,0,0,0,4.28049181116963,4.76471576731718,2.0190142737785,3.12956537739216,1.74420125104357,3.73466510648602,7.97162586204562,4.4795654920116,2.87505128729943,3.85899993932794,3.62681071005672,7.05796978199174,2.57259436035947,2.86533439938757,1.54701627683233,29.7405197463609,29.6234948392338,22.8179305262225,1.69422266034566,1.77858959222228,0.899899717281399,3.9554654502679,0.7104801149461,1.19840044207362,4.99483796918021,17.8346133170582,16.2007125998029,13.2504725651371,17.9960120174396,11.9269012113871,16.9037302916637,17.6355666673555,20.2228133054205,39.6417171597799,42.9029455966231,38.2480267808046,29.5425284515634,28.6356324475542,30.2129754922921,33.5019598801657,36.0168070420275,31.4764390420229,24.1595440088408,20.6438937158699,26.2823218613674,3.7863096666592,2.79614772395106,4.05810284182349,1.72084775396277,4.75979933595425,9.17495425784289,10.3964226791627,7.6164570806547,5.33688796500657,2.89731548382698,1.81850203222008,1.7666978725517,8.02807492727079,1.28326477414318,2.54805239706646,0,1.94841936910093,1.26679932737549,2.02209778005913,5.36664234679582,3.6251303710604,9.35185476108396,5.37804512975021,7.91610243611567,4.61230994512117,4.97384713823654,8.34879820663504,6.53466274914312,4.94389935468748,6.79616977523585,2.65383165584962,10.5148452465816,6.8460870722722,4.363877278217,3.72783522436244,37.1831612204665,25.3430515244281,4.08731288333746,2.63593273913025,3.59941638596045,1.39777249780371,40.8928445575166,28.8225379775735,15.8324483662209,36.1554585999935,31.708716708961,30.1292664611362,27.5810147215188,6.61955865027056,5.10068579501381,4.29628689337247,9.6803253707778,10.0192741081282,8.27647575960503,10.803727788321,11.9056806090215,15.1041028115948,14.7330778327577,14.8048724804372,17.8505325809921,11.2095356325078,14.7502742530899,10.381116325673,11.1789823538063,13.3462679628287,10.7958171621872,5.35033554660653,7.96137067273973,2.1066395619397,0.772043721344145,1.70498099637356,5.79952163099405,7.73935997937617,7.20248245844059,7.57583153872673,9.44468312387538,7.0962871928194,9.30135779001631,14.2184902741798,7.82327793860036,8.3925523455875,7.05920095540109,9.40398190731926,11.5497990066013,10.3188554186794,11.541752013392,25.2347938276953,19.7576855768226,0.660837565967596,1.85115396664481,11.9441420299731,5.34144345279009,6.18563814346048,5.84882221407693,4.66993892074228,3.04361001780095,4.74529061544512,4.44687177754829,5.02670417600539,4.37704238490532,3.70431765526328,4.49409704327111,1.94524244887225,2.19055400579804,5.87970492954553,5.36968009265725,9.01661885384643,7.33144780243131,4.65485969202302,4.9095073923223,5.81776141543167,5.01874503130647,5.02395929092399,4.81248939295022,7.41131567717872,2.33583148002532,3.34150291692445,2.47348323623339,1.21716072833102,2.41177159752417,2.03700681425136,3.45235364940973,3.24270453550071,2.47105271869273,24.4405951096503,5.20997326735905,4.05648975048929,5.05157755894223,7.3552939543984,8.68398338454061,6.28160846566456,5.49525094134406,6.68156403412306,6.11082308790677,4.92849521405854,8.04030035720716,6.66522194480839,7.02481132288076,6.9359463406724,6.64394068946325,8.13219320153184,4.58817281204066,4.14443956478149,5.20736610893442,3.01582567878545,0.54390568381871,5.90117127622843,2.75936746304733,36.6055345172166,30.2406151407884,5.73772308818364,7.32165688892682,6.62567260774139,7.02789739733949,9.26320610251035,4.77937595905104,6.46116154838943,9.05844898524264,6.07216052512342,10.5212108848072,4.34816555741176,24.4204200480573,8.80028528291265,5.52003371368491,8.1443479676788,6.59880491890142,13.2745138339963,4.37005145078967,3.93020624054176,2.82907619633847,5.61073596473468,3.3817866273832,6.20227903603731,3.99887102425256,4.27796854061666,4.74055136903724,7.37930260024991,2.06271086496374,10.8940673841212,11.8840322060665,9.31382523235832,9.64516657642165,11.3497749531055,8.91844088010353,11.5184314421485,12.4830629136986,1.87737366450968,2.1183207086382,3.30792597082443,3.2977250588296,7.10443477461984,4.46315644468353,5.37175548014114,5.41664969158702,5.82961673259701,37.6413363081335,2.9048049735635,6.19160603889667,3.1483069652851,2.0720530270516,3.2806614653046,2.51655990527175,1.86976272993241,1.6794174278839,3.17859939750175,0.954670618015114,9.96458379780576,6.50622294805916,7.12835249423888,5.64538399239065,3.05707589244649,4.45052343069908,5.53778153359751,5.49687478166462,2.85152941241944,5.59205381778233,11.2738587736838,6.42921147989109,3.64008679005615,7.38914515707381,6.45799117388655,7.26511339610346,7.98029222791127,8.33308063001281,13.6317147753424,12.0792060413003,9.50499020650956,4.10814456816632,3.24360344464263,4.41657115808757,4.15746633528944,5.19177417435696,4.96703386953162,4.20684073319891,3.83992770653901,3.33189284828887,6.02033772574499,3.7305688500631,5.36018344068638,5.09922760693746,5.96072201126002,7.48210265930198,0.221985953374065,0.179427713218951,0.671538465456314,6.95482538515886,3.94133198447482,7.14291334642334,3.64426244434412,1.50471631210609,33.885110557024,29.9211403729665,34.3737308063638,26.980949627959,41.7900337060092,43.8128460486026,33.7511250115903,47.7340475417674,41.2359592175626,48.1517089929193,9.13328658740755,13.167820822234,9.21961471072325,8.265628380322,8.38452650511929,9.55986243940074,8.66762238426299,14.0103838922448,9.62757628775446,9.09709962349671,7.85785829659743,9.43131706930381,6.08669798554236,11.4605022804716,9.47685237767619,7.1444053692461,9.38663040153329,8.87382414133043,6.59337441285291,7.50714492685426,9.60033906679163,5.85670160325814,8.58370283810355,8.43009216467505,8.84628175904108,7.53070010235921,9.69518256225695,11.3119975918272,8.01244271690584,12.3451299764702,11.3889617399207,11.1310065084387,12.2769312950907,7.2820315357404,9.06661071611365,16.7373087218424,10.292990771598,6.44613162144895,10.7121465958552,5.29419405886837,9.27471342481686
|short_description=p2@Grlf1
|short_description=p2@Grlf1
}}
}}

Latest revision as of 07:08, 26 September 2015

Short description:p2@Grlf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Grlf1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000075845, NM_172739, uc009fhw.1_5end
EntrezGene:Grlf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Grlf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.80
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.14
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.55
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.32
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B92.28
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.76
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.48
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.86
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.06
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C329.74
Mouse Granule cells, donor2.CNhs12357.11731-123E329.62
Mouse Granule cells, donor3.CNhs12108.11636-122C722.82
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D517.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F516.20
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D913.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.93
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F217.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D620.22
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D339.64
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F342.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D738.25
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D429.54
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F428.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D830.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E433.50
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E536.02
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I631.48
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D624.16
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.64
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E126.28
Mouse Schwann, donor1.CNhs12507.11728-123D93.79
Mouse Schwann, donor2.CNhs12573.11746-123F92.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.17
Mouse hepatocyte, donor6.CNhs13090.11822-124F410.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.62
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.03
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.37
accessory axillary lymph node, adult.CNhs10475.1063-29H93.63
adrenal gland, adult.CNhs10508.49-24D79.35
adrenal gland, embryo E14.CNhs11038.406-44C55.38
adrenal gland, embryo E16.CNhs11004.1254-43D67.92
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F54.97
adrenal gland, neonate N00.CNhs11191.1311-23C18.35
adrenal gland, neonate N25.CNhs11223.1377-27I36.53
amnion, adult pregnant day17.5.CNhs10488.583-22A84.94
aorta, adult.CNhs10498.46-23H16.80
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F510.51
bone (os femoris), neonate N16.CNhs11225.1525-43A66.85
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B237.18
cerebellum, neonate N30.CNhs11135.1395-42I225.34
colon, adult.CNhs10468.36-18H74.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A440.89
corpus striatum, adult.CNhs10487.19-21D828.82
corpus striatum, neonate N00.CNhs11226.630-43F115.83
cortex, adult.CNhs10473.12-14D536.16
cortex, neonate N30.CNhs11107.1392-42F231.71
diencephalon, adult.CNhs10482.20-12F230.13
diencephalon, neonate N30.CNhs11201.1388-42B227.58
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.62
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.10
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G49.68
eyeball, embryo E12.CNhs11016.345-16C610.02
eyeball, embryo E14.CNhs10521.399-16E28.28
eyeball, embryo E15.CNhs10593.426-16C910.80
eyeball, embryo E17.CNhs11023.1261-18D411.91
eyeball, neonate N00.CNhs11207.633-15C615.10
eyeball, neonate N01.CNhs11140.1532-43E714.73
eyeball, neonate N02.CNhs11205.1551-44G814.80
eyeball, neonate N16.CNhs11188.777-19A217.85
forelimb, embryo E11.CNhs10596.335-25E211.21
forelimb, embryo E12.CNhs10600.359-14H214.75
forelimb, embryo E13.CNhs10589.384-1E210.38
forelimb, embryo E14.CNhs10577.413-26A811.18
forelimb, embryo E15.CNhs11007.437-20E713.35
forelimb, embryo E17.CNhs10598.1517-43C410.80
forelimb, embryo E18.CNhs11008.1520-43B55.35
gonad, embryo E13.CNhs11044.1564-45I67.96
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E95.80
heart, embryo E12.CNhs11015.353-12F57.74
heart, embryo E13.CNhs11013.376-3I97.20
heart, embryo E14.CNhs10597.403-26D47.58
heart, embryo E15.CNhs11017.431-16C89.44
heart, embryo E16.CNhs11021.457-17C67.10
heart, embryo E17.CNhs11025.479-18E59.30
heart, embryo E18.CNhs11030.1283-20G314.22
heart, neonate N00.CNhs11213.639-21E37.82
heart, neonate N03.CNhs11221.1349-25I28.39
heart, neonate N10.CNhs11118.749-24G17.06
heart, neonate N16.CNhs11209.782-15G19.40
heart, neonate N20.CNhs11127.821-26I611.55
heart, neonate N25.CNhs11196.1351-25D310.32
heart, neonate N30.CNhs11202.1390-42D211.54
hippocampus, adult.CNhs10478.13-16E825.23
hippocampus, neonate N00.CNhs11228.627-43G119.76
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I511.94
intestine, embryo E13.CNhs11010.381-16D55.34
intestine, embryo E15.CNhs10602.976-16D86.19
intestine, embryo E16.CNhs10585.463-22H45.85
intestine, embryo E17.CNhs10582.482-18D34.67
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E94.45
intestine, neonate N06.CNhs11102.688-20B85.03
intestine, neonate N07.CNhs11095.720-20F24.38
intestine, neonate N10.CNhs11098.755-23A53.70
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I95.88
kidney, embryo E15.CNhs10997.434-16F85.37
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I27.33
kidney, embryo E18.CNhs11001.1288-20C74.65
kidney, neonate N00.CNhs11214.646-21G74.91
kidney, neonate N10.CNhs11206.758-6D55.82
kidney, neonate N20.CNhs11113.832-19I15.02
kidney, neonate N25.CNhs11122.1353-25F35.02
kidney, neonate N30.CNhs11203.1385-42H14.81
liver, adult pregnant day01.CNhs10466.508-5B27.41
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A824.44
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A35.05
liver, neonate N25.CNhs11198.1368-26H17.36
liver, neonate N30.CNhs11106.1382-42D18.68
lung, adult.CNhs10474.28-22B16.28
lung, embryo E12.CNhs10522.354-16G25.50
lung, embryo E14.CNhs10604.404-26F86.68
lung, embryo E15.CNhs11020.432-17C56.11
lung, embryo E16.CNhs10998.458-17B64.93
lung, embryo E17.CNhs10605.480-44A68.04
lung, embryo E18.CNhs10583.1287-20I66.67
lung, neonate N00.CNhs11224.640-42C67.02
lung, neonate N06.CNhs11212.683-20E56.94
lung, neonate N07.CNhs11111.715-19A36.64
lung, neonate N10.CNhs11219.750-23E68.13
lung, neonate N20.CNhs11109.822-18A44.59
lung, neonate N25.CNhs11119.1359-25C74.14
lung, neonate N30.CNhs11133.1394-42H25.21
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C236.61
medulla oblongata, neonate N30.CNhs11200.1396-42A330.24
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.74
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.32
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.03
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.26
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.06
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.52
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I924.42
ovary, adult.CNhs10507.91-2I78.80
ovary, embryo E18.CNhs11040.505-44H75.52
ovary, neonate N00.CNhs11217.1299-22I48.14
oviduct, adult pregnant day01.CNhs10500.988-6G66.60
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E52.83
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G810.89
pituitary gland, embryo E12.CNhs11018.346-16E611.88
pituitary gland, embryo E13.CNhs11009.370-44C79.31
pituitary gland, embryo E14.CNhs11037.398-44A59.65
pituitary gland, embryo E15.CNhs10592.427-16B911.35
pituitary gland, embryo E16.CNhs11036.449-43F68.92
pituitary gland, embryo E17.CNhs11039.1265-44F511.52
pituitary gland, neonate N00.CNhs11190.1308-22E912.48
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G47.10
skin, neonate N03.CNhs11215.662-22H34.46
skin, neonate N06.CNhs11097.693-20I55.37
skin, neonate N10.CNhs11108.762-6C45.42
small intestine, neonate N16.CNhs11114.790-21I15.83
spinal cord, adult.CNhs10505.24-13C937.64
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C16.19
spleen, embryo E18.CNhs11011.1271-21F23.15
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H13.28
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.18
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E39.96
stomach, embryo E15.CNhs10603.1252-16G86.51
stomach, embryo E16.CNhs11022.459-17D47.13
stomach, embryo E17.CNhs11006.1035-18D55.65
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B84.45
stomach, neonate N07.CNhs11210.718-18A95.54
stomach, neonate N25.CNhs11104.1355-25E45.50
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G511.27
testis, embryo E13.CNhs11031.389-23F56.43
testis, embryo E15.CNhs11034.443-27C53.64
testis, embryo E16.CNhs11033.470-26G57.39
testis, embryo E17.CNhs11029.486-18I56.46
testis, embryo E18.CNhs11027.503-18G57.27
testis, neonate N00.CNhs11189.1300-22B77.98
testis, neonate N07.CNhs11222.726-26I48.33
testis, neonate N10.CNhs11204.763-44D913.63
testis, neonate N20.CNhs11110.839-18H312.08
testis, neonate N30.CNhs11130.1391-42E29.50
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I24.42
thymus, embryo E16.CNhs11002.456-26C54.16
thymus, embryo E17.CNhs10581.478-18C15.19
thymus, embryo E18.CNhs10595.1273-19G44.97
thymus, neonate N02.CNhs11181.1541-43F84.21
thymus, neonate N03.CNhs11137.2104-43C73.84
thymus, neonate N06.CNhs11197.681-26C43.33
thymus, neonate N07.CNhs11211.713-19D36.02
thymus, neonate N10.CNhs11194.748-24E43.73
thymus, neonate N20.CNhs11186.820-7A25.36
thymus, neonate N25.CNhs11125.1362-25G75.10
thymus, neonate N30.CNhs11132.1393-42G25.96
tongue, adult.CNhs10499.32-1B47.48
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E46.95
uterus, adult pregnant day19.CNhs10497.590-15F53.94
uterus, adult.CNhs10509.92-27E57.14
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A133.89
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A229.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A334.37
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A441.79
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A543.81
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A633.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A747.73
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A841.24
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A948.15
whole body, embryo E11.CNhs11014.324-5I89.13
whole body, embryo E12.CNhs10587.857-27C913.17
whole body, embryo E13.CNhs10512.372-23H29.22
whole body, embryo E14.5.CNhs10578.420-27D28.27
whole body, embryo E14.CNhs10519.395-14B18.38
whole body, embryo E16.CNhs10514.453-14F29.56
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.10
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.43
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.46
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.51
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.86
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.43
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.53
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.70
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.01
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.28
whole body, embryo E17.5.CNhs10513.490-9F99.07
whole body, embryo E17.CNhs10517.475-3I516.74
whole body, embryo E18.CNhs10516.493-3B310.29
whole body, neonate N00.CNhs10525.657-19C26.45
whole body, neonate N01.CNhs10576.659-23C610.71
whole body, neonate N06.CNhs10515.692-21D15.29
whole body, neonate N10.CNhs10518.761-6B49.27





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.94e-1323
neuroblast (sensu Vertebrata)3.94e-1323
neuron1.71e-1133
neuronal stem cell1.71e-1133
neuroblast1.71e-1133
electrically signaling cell1.71e-1133
electrically responsive cell1.23e-0739
electrically active cell1.23e-0739

Uber anatomy
Ontology termp-valuen
neurectoderm9.94e-2664
neural plate9.94e-2664
presumptive neural plate9.94e-2664
structure with developmental contribution from neural crest1.12e-2492
regional part of nervous system4.13e-2454
central nervous system3.49e-2373
ecto-epithelium7.43e-2373
neural tube1.25e-2252
neural rod1.25e-2252
future spinal cord1.25e-2252
neural keel1.25e-2252
ectoderm-derived structure2.02e-2295
ectoderm2.02e-2295
presumptive ectoderm2.02e-2295
pre-chordal neural plate4.87e-2249
nervous system9.11e-2275
brain6.39e-2047
future brain6.39e-2047
regional part of brain2.23e-1946
anterior neural tube4.88e-1940
regional part of forebrain2.46e-1839
forebrain2.46e-1839
future forebrain2.46e-1839
gray matter1.32e-1734
brain grey matter3.21e-1529
regional part of telencephalon3.21e-1529
telencephalon3.21e-1529
tube5.49e-12114
anatomical conduit3.04e-11122
cerebral cortex1.00e-1021
cerebral hemisphere1.00e-1021
pallium1.00e-1021
regional part of cerebral cortex7.03e-0917
occipital lobe9.28e-0810
visual cortex9.28e-0810
neocortex9.28e-0810
tissue3.49e-07349
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