FFCP PHASE1:Mm9::chr7:16899318..16899336,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:16899318..16899336,- | |||
|description=CAGE_peak_at_chr7:16899318..16899336,- | |description=CAGE_peak_at_chr7:16899318..16899336,- | ||
|id=chr7:16899318..16899336,- | |id=chr7:16899318..16899336,- | ||
|ontology_enrichment_celltype=CL:0000144!7.26e-07!121;CL:0000012!7.26e-07!121 | |ontology_enrichment_celltype=CL:0000144!7.26e-07!121;CL:0000012!7.26e-07!121 | ||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.10e-14,46;CL:0000134,1.10e-14,46;CL:0000049,3.99e-13,19;CL:0000219,2.92e-12,54;CL:0000988,3.62e-12,32;CL:0002032,3.62e-12,32;CL:0000037,3.62e-12,32;CL:0000837,3.62e-12,32;CL:0000034,4.37e-10,97;CL:0000723,2.47e-09,91;CL:0000048,2.47e-09,91;CL:0000557,2.08e-07,7;CL:0000213,6.50e-07,1;CL:0002078,6.50e-07,1;CL:0000115,6.50e-07,1;CL:0002262,6.50e-07,1;CL:1000398,6.50e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0050686,2.18e-08,6;DOID:0060100,5.88e-08,3;DOID:4045,5.88e-08,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.10e-14,46;UBERON:0002394,6.50e-07,1;UBERON:0001281,6.50e-07,1;UBERON:0000353,6.50e-07,1;UBERON:0003497,6.50e-07,1;UBERON:0003909,6.50e-07,1;UBERON:0003928,6.50e-07,1;UBERON:0003835,6.50e-07,1;UBERON:0003513,6.50e-07,1;UBERON:0001280,6.50e-07,1;UBERON:0004647,6.50e-07,1;UBERON:0002294,6.50e-07,1;UBERON:0001173,6.50e-07,1;UBERON:0004912,6.50e-07,1;UBERON:0005171,6.50e-07,1 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0.30246421130683,0,0.671517087647559,0,1.16210991097419,0,0,0,0,0.342401459862411,0.437102012094987,0,0,0,0,0,0,0,0.198581902401771,0,0,0,0.57423196411502,0,0.215471232685889,0,0,0,1.27006134691926,0,0,0.866554859253824,0.498703936075477,0.816677425049476,2.09265815368454,1.5626706890476,0,19.4116391050235,2.04913645487534,0.485510353031154,0.125896817975577,0.101376931219515,0,0,0,0,0.194429899074283,0.139986421625363,0,0.167782606057736,0,1.00828139742739,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0,0.142371680799103,0,0.530083353332288,0.377857800533928,5.2175607966302,0.860423876981386,0,0,0,0,0,0,1.03914401841148,1.06001872353102,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63593273913025,1.79970819298022,3.68503658511888,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,2.1066395619397,2.31613116403244,1.42081749697796,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0.585400943573396,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0.185194527369712,0,0,0,0.509935289981566,0.979660166265606,1.10559979043539,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.197008964751127,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0.320297694209588,0.348975407639361,0,0.30246421130683,0,0.671517087647559,0,1.16210991097419,0,0,0,0,0.342401459862411,0.437102012094987,0,0,0,0,0,0,0,0.198581902401771,0,0,0,0.57423196411502,0,0.215471232685889,0,0,0,1.27006134691926,0,0,0.866554859253824,0.498703936075477,0.816677425049476,2.09265815368454,1.5626706890476,0,19.4116391050235,2.04913645487534,0.485510353031154,0.125896817975577,0.101376931219515,0,0,0,0,0.194429899074283,0.139986421625363,0,0.167782606057736,0,1.00828139742739,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0,0.142371680799103,0,0.530083353332288,0.377857800533928,5.2175607966302,0.860423876981386,0,0,0,0,0,0,1.03914401841148,1.06001872353102,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63593273913025,1.79970819298022,3.68503658511888,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,2.1066395619397,2.31613116403244,1.42081749697796,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0.585400943573396,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0,0.35613120733451,0.162886959353576,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0.185194527369712,0,0,0,0.509935289981566,0.979660166265606,1.10559979043539,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.197008964751127,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p@chr7:16899318..16899336,- | |short_description=p@chr7:16899318..16899336,- | ||
}} | }} |
Latest revision as of 16:15, 4 August 2015
Short description: | p@chr7:16899318..16899336, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:16899318..16899336, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 1.10e-14 | 46 |
mesenchymal cell | 1.10e-14 | 46 |
common myeloid progenitor | 3.99e-13 | 19 |
motile cell | 2.92e-12 | 54 |
hematopoietic cell | 3.62e-12 | 32 |
hematopoietic oligopotent progenitor cell | 3.62e-12 | 32 |
hematopoietic stem cell | 3.62e-12 | 32 |
hematopoietic multipotent progenitor cell | 3.62e-12 | 32 |
stem cell | 4.37e-10 | 97 |
somatic stem cell | 2.47e-09 | 91 |
multi fate stem cell | 2.47e-09 | 91 |
granulocyte monocyte progenitor cell | 2.08e-07 | 7 |
lining cell | 6.50e-07 | 1 |
meso-epithelial cell | 6.50e-07 | 1 |
endothelial cell | 6.50e-07 | 1 |
endothelial cell of sinusoid | 6.50e-07 | 1 |
endothelial cell of hepatic sinusoid | 6.50e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.10e-14 | 46 |
bile duct | 6.50e-07 | 1 |
hepatic sinusoid | 6.50e-07 | 1 |
parenchyma | 6.50e-07 | 1 |
abdomen blood vessel | 6.50e-07 | 1 |
sinusoid | 6.50e-07 | 1 |
digestive system duct | 6.50e-07 | 1 |
abdominal segment blood vessel | 6.50e-07 | 1 |
trunk blood vessel | 6.50e-07 | 1 |
liver parenchyma | 6.50e-07 | 1 |
liver lobule | 6.50e-07 | 1 |
biliary system | 6.50e-07 | 1 |
biliary tree | 6.50e-07 | 1 |
biliary bud | 6.50e-07 | 1 |
hepatic duct | 6.50e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 2.18e-08 | 6 |
musculoskeletal system cancer | 5.88e-08 | 3 |
muscle cancer | 5.88e-08 | 3 |