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FFCP PHASE1:Mm9::chr9:57315792..57315881,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56807
|EntrezGene=56807
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9JKD3
|UniProt=Q9JKD3
|association_with_transcript=0bp_to_ENSMUST00000046587,NM_020270,uc009puw.1,uc009pux.1_5end
|association_with_transcript=0bp_to_ENSMUST00000046587,NM_020270,uc009puw.1,uc009pux.1_5end
|cluster_id=chr9:57315792..57315881,-
|description=CAGE_peak_1_at_Scamp5_5end
|description=CAGE_peak_1_at_Scamp5_5end
|id=chr9:57315792..57315881,-
|id=chr9:57315792..57315881,-
|ontology_enrichment_celltype=CL:0000221!9.86e-15!44;CL:0000133!9.86e-15!44;CL:0002319!1.49e-14!43;CL:0000055!9.44e-13!50;CL:0000540!1.72e-12!33;CL:0000047!1.72e-12!33;CL:0000031!1.72e-12!33;CL:0000404!1.72e-12!33;CL:0000117!3.55e-12!23;CL:0000337!3.55e-12!23;CL:0000393!6.00e-11!39;CL:0000211!6.00e-11!39;CL:0002321!7.51e-11!70;CL:0000220!7.51e-11!70
|ontology_enrichment_celltype_v019_2=CL:0000221,9.68e-15,44;CL:0000133,9.68e-15,44;CL:0002319,1.47e-14,43;CL:0000540,1.69e-12,33;CL:0000047,1.69e-12,33;CL:0000031,1.69e-12,33;CL:0000404,1.69e-12,33;CL:0000117,3.50e-12,23;CL:0000337,3.50e-12,23;CL:0000393,5.93e-11,39;CL:0000211,5.93e-11,39;CL:0002321,7.03e-11,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.31e-29!73;UBERON:0005743!1.31e-29!73;UBERON:0000073!2.32e-29!75;UBERON:0001016!2.32e-29!75;UBERON:0001049!8.63e-23!52;UBERON:0005068!8.63e-23!52;UBERON:0006241!8.63e-23!52;UBERON:0007135!8.63e-23!52;UBERON:0004121!2.37e-22!102;UBERON:0000924!2.37e-22!102;UBERON:0006601!2.37e-22!102;UBERON:0000955!3.85e-22!50;UBERON:0006238!3.85e-22!50;UBERON:0002616!1.66e-21!49;UBERON:0002346!4.54e-21!71;UBERON:0003075!4.54e-21!71;UBERON:0007284!4.54e-21!71;UBERON:0000033!1.04e-20!63;UBERON:0002020!7.51e-19!34;UBERON:0003056!4.66e-17!49;UBERON:0003080!1.30e-16!40;UBERON:0002791!2.64e-16!29;UBERON:0003528!2.64e-16!29;UBERON:0001893!2.64e-16!29;UBERON:0002780!5.27e-16!39;UBERON:0001890!5.27e-16!39;UBERON:0006240!5.27e-16!39;UBERON:0000956!6.35e-12!21;UBERON:0001869!6.35e-12!21;UBERON:0000203!6.35e-12!21;UBERON:0002619!2.63e-10!17;UBERON:0002021!7.03e-08!10;UBERON:0000411!7.03e-08!10;UBERON:0001950!7.03e-08!10;UBERON:0000468!9.80e-08!333;UBERON:0003076!7.42e-07!12;UBERON:0003057!7.42e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.26e-29,73;UBERON:0001016,2.23e-29,75;UBERON:0000073,2.86e-24,54;UBERON:0004121,8.40e-24,95;UBERON:0000924,8.40e-24,95;UBERON:0006601,8.40e-24,95;UBERON:0002346,3.07e-23,64;UBERON:0003075,3.07e-23,64;UBERON:0007284,3.07e-23,64;UBERON:0001049,8.38e-23,52;UBERON:0005068,8.38e-23,52;UBERON:0006241,8.38e-23,52;UBERON:0007135,8.38e-23,52;UBERON:0000955,3.93e-20,47;UBERON:0006238,3.93e-20,47;UBERON:0002616,1.65e-19,46;UBERON:0002020,7.34e-19,34;UBERON:0010371,3.46e-18,73;UBERON:0003056,4.56e-17,49;UBERON:0003080,1.27e-16,40;UBERON:0003528,2.59e-16,29;UBERON:0002791,2.59e-16,29;UBERON:0001893,2.59e-16,29;UBERON:0002780,5.17e-16,39;UBERON:0001890,5.17e-16,39;UBERON:0006240,5.17e-16,39;UBERON:0010314,5.71e-13,92;UBERON:0000956,6.26e-12,21;UBERON:0001869,6.26e-12,21;UBERON:0000203,6.26e-12,21;UBERON:0002619,2.60e-10,17;UBERON:0011216,6.08e-09,194;UBERON:0002021,6.96e-08,10;UBERON:0000411,6.96e-08,10;UBERON:0001950,6.96e-08,10;UBERON:0003076,7.37e-07,12;UBERON:0003057,7.37e-07,12
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0848010012585,3.16011120628178,6.08175645870493,4.31386020092274,2.7283372825337,3.04345382634718,2.98022032171897,2.28371354087941,2.51072196196781,2.1202954489111,1.447929326445,1.41156659191577,1.8516997340553,1.44317762460494,2.22066114144981,3.85441652145859,3.7737612073591,2.33256027184637,6.04384618910682,90.6059196010973,19.1436124960206,15.0184331899157,4.93047271881851,3.00943262421218,233.242511000848,237.067496801196,222.856354727925,319.303212794572,244.574459558119,250.790773933381,230.857695079278,240.921843724958,224.758634856165,230.40333872956,4.67043064128795,19.1531939232495,17.5855613926758,19.6916440825318,14.6729213839588,17.4651333027513,27.1141007917971,17.9250499797838,22.7852638810189,24.5116295410884,20.2783439912192,19.2398868213798,20.5074901359042,22.2807530368945,21.7680427341774,16.6702791949076,20.6274100181843,22.3774695737898,19.3680373377554,21.3438434194876,15.0862471049583,22.3619515760765,14.3061713968393,21.9473089114816,19.4806417459734,19.884432854544,21.2196448532416,17.8887403777733,21.8644623291837,24.1291176812828,24.0829086792073,21.670986122624,21.2800142448238,23.3954630190809,19.2906610981141,45.7153357626441,23.3931608445408,26.2142685938924,16.4507965579205,19.1914534633978,15.3032771509478
|phase1_expression=17.6163731815273,54.4401635917403,58.2399026418606,141.855715102903,115.706913617606,26.5249249620786,34.8082834487333,0,0,0,0,0,0,0,3.33109761815663,3.44207954562704,2.79824751251259,0.788655413395594,1.23402990245165,0.42438965179803,50.3456277694333,0.496454756004426,0,41.4380375034923,45.6524469323668,41.9189333803965,40.060865642794,27.3648465511079,37.0545667939929,42.3410617996684,29.4901579171555,0,0,0,23.108129580102,22.7741464141135,20.4169356262369,0,0,0,0,0.683045484958446,0,15.7371022469472,17.2340783073175,13.3989129078028,39.90195856175,48.6196098728396,43.9372365468944,49.385194364868,21.6978953519312,50.3133975277401,0,0,0,14.663787854049,16.0458726365704,17.532851137433,120.985243594039,102.095258999502,138.175245964347,26.0910289693232,20.4537803105562,80.5410246966852,92.9534380812956,87.3890541383703,92.8760342607055,115.265491596466,57.962493280439,65.6128860292017,59.1013141397383,149.109813858785,145.994105569017,64.3076695878509,59.7117284443613,90.083441087782,220.231761998777,275.42158824975,223.190292821322,109.333732528331,120.214763693566,109.39180781692,272.482607025348,186.837186530518,227.05819619634,119.324577116835,112.61599951209,93.7589212501262,15.0695124733036,23.8050414336374,13.3337664802772,11.185510400758,7.47968467078526,10.7940638327563,16.2444104361917,12.5447528387254,22.611551641212,0.170430322578058,0.259786004602869,0,33.0982036475199,11.5493829672886,10.1922095882658,0,4.76280290224671,5.32055717497707,6.57181778519218,26.4906600948219,8.54495016035667,15.7348667408714,13.8788261412909,17.354532263792,14.2981608298756,14.1679282119465,16.6975964132701,10.053327306374,23.7307169024999,5.78397427679647,10.6153266233985,10.1913115466868,5.74187947997023,8.727754556434,48.4618579167118,169.812862266697,159.179497178226,89.9208834334242,0.838705871541442,0.599902730993408,0.508280908292259,220.491821203899,179.79773690772,126.282623873429,293.067803844178,229.376765225306,230.644729461112,201.665889993223,15.8869407606493,9.57933673697716,16.9324248150562,48.822510565662,7.54698569183682,16.3230494147766,20.5270827978098,26.8254575747573,34.4945050697232,34.975045637764,41.3224605308404,101.670424700433,3.88022387279116,5.67318240503458,8.44565395986955,13.1517439456545,12.2340789659263,10.447564995665,11.3180175024369,11.7430217422911,0.702213187313235,0.51469581422943,0.852490498186778,9.32065976409758,5.15957331958412,5.58192390529146,9.46978942340841,7.47704080640135,8.79322543458056,6.0458825635106,6.43856163359086,5.7215017759913,7.40519324610662,11.3275550214576,8.35008738322314,8.91819923294527,10.3188554186794,6.1734952629771,229.005753986335,100.743615519319,342.974696737182,71.401652999157,7.25180051819795,9.28946687441754,10.1805294444454,10.6892268050372,11.5636582799333,14.8375988367796,83.0425857702895,25.1989400727737,23.8768448360256,26.0632978373908,18.1316601020782,76.3996497356088,67.0027954611552,91.4058444237545,8.91439134479484,10.5108631600951,9.01661885384643,9.9789150644204,12.2190066915604,18.0950415317022,23.7769379587207,28.3411484120836,27.0037811887165,25.2964186039691,13.933273473096,8.3422552858047,9.23827277032054,10.3436571697033,10.9544465549792,10.1294407096015,12.4766667372896,11.7955416354832,12.1601420081277,17.0228076176611,37.3797336971122,36.4698128715133,40.5648975048929,31.3197808654419,19.7337154874103,15.4381926836277,4.24932337383191,5.87423376488503,4.23708938749267,3.73439188705414,3.98973422090454,6.365237782789,4.28478553594825,6.43941037930736,7.56648691709717,7.9727288273559,10.5240147313941,4.7520361267564,5.87128938344045,4.05017364028232,37.6978209848181,59.8296252200581,3.93411418415229,3.31124095565679,187.201987925765,189.648508906185,8.6885521049638,6.31177318010932,21.4545589203055,15.6175497718655,37.2682478077742,40.1467580560287,39.2125666385014,43.876862272269,24.6934528021686,26.8875389278407,26.8795689003636,216.249245951876,11.3552068166615,18.8749539887291,15.1484872198826,12.2077890999676,7.96470830039777,12.3818124439041,12.9999129494843,7.73280826999182,14.4697927511579,13.5271465095328,13.4382712447475,21.8120237686503,12.83390562185,7.9009189483954,3.16255825724996,6.18813259489121,39.8314338731932,11.5239100180039,16.6872702079753,13.9319072770535,13.8325382240973,24.4365280114837,26.1632942757372,35.6223990464081,16.4270195644597,36.8587803303047,3.74898276693435,6.26567761177624,10.4951877352339,7.17723806645055,5.61050016814741,4.43180429311665,59.1706098358597,168.922450131574,5.29699730473343,10.9385040020508,7.22258656741876,8.4765805652111,4.10082683163076,6.86334519619568,0,0.139951452323658,0.414599921413271,118.379156633874,9.96458379780576,14.6390016331331,18.468913280528,27.1814784818809,30.1340337969725,43.5611838822971,46.9471628519908,64.1302057860873,59.2340427943493,3.72803587852155,5.07323644815771,10.0176085849466,13.0712207461107,18.4728628926845,18.728174404271,18.5851738039856,17.1341568422801,22.1347454234715,14.8900269084509,4.34851417486811,4.60848010012585,3.16011120628178,6.08175645870493,4.31386020092274,2.7283372825337,3.04345382634718,2.98022032171897,2.28371354087941,2.51072196196781,2.1202954489111,1.447929326445,1.41156659191577,1.8516997340553,1.44317762460494,2.22066114144981,3.85441652145859,3.7737612073591,2.33256027184637,6.04384618910682,90.6059196010973,19.1436124960206,15.0184331899157,4.93047271881851,3.00943262421218,233.242511000848,237.067496801196,222.856354727925,319.303212794572,244.574459558119,250.790773933381,230.857695079278,240.921843724958,224.758634856165,230.40333872956,4.67043064128795,19.1531939232495,17.5855613926758,19.6916440825318,14.6729213839588,17.4651333027513,27.1141007917971,17.9250499797838,22.7852638810189,24.5116295410884,20.2783439912192,19.2398868213798,20.5074901359042,22.2807530368945,21.7680427341774,16.6702791949076,20.6274100181843,22.3774695737898,19.3680373377554,21.3438434194876,15.0862471049583,22.3619515760765,14.3061713968393,21.9473089114816,19.4806417459734,19.884432854544,21.2196448532416,17.8887403777733,21.8644623291837,24.1291176812828,24.0829086792073,21.670986122624,21.2800142448238,23.3954630190809,19.2906610981141,45.7153357626441,23.3931608445408,26.2142685938924,16.4507965579205,19.1914534633978,15.3032771509478
|short_description=p1@Scamp5
|short_description=p1@Scamp5
}}
}}

Latest revision as of 21:31, 26 September 2015

Short description:p1@Scamp5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Scamp5_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000046587, NM_020270, uc009puw.1, uc009pux.1_5end
EntrezGene:Scamp5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Scamp5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.62
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I554.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I658.24
CD326+ enterocyte, pool1.CNhs13542.11848-124I3141.86
CD326+ enterocyte, pool2.CNhs13197.11849-124I4115.71
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I726.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I834.81
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.44
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A350.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D141.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D245.65
GP2+ M cell, pool1.CNhs13228.11845-124H941.92
GP2+ M cell, pool2.CNhs13231.11846-124I140.06
GP2+ M cell, pool3.CNhs13240.11847-124I227.36
Ileum epithelium, pool1.CNhs13199.10252-104B937.05
Ileum epithelium, pool2.CNhs13232.10253-104C142.34
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C829.49
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F523.11
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F622.77
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F720.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D815.74
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D917.23
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.40
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B739.90
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C248.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B843.94
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C349.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C421.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C450.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C114.66
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E116.05
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C517.53
Mouse Granule cells, donor1.CNhs12131.11713-123C3120.99
Mouse Granule cells, donor2.CNhs12357.11731-123E3102.10
Mouse Granule cells, donor3.CNhs12108.11636-122C7138.18
Mouse Meningeal cells, donor1.CNhs12132.11716-123C626.09
Mouse Meningeal cells, donor3.CNhs12109.11639-122D120.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C780.54
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E792.95
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D287.39
Mouse Microglia, donor1.CNhs12629.11718-123C892.88
Mouse Microglia, donor2.CNhs12634.11736-123E8115.27
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D557.96
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F565.61
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D959.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1149.11
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5145.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D264.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F259.71
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D690.08
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3220.23
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3275.42
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7223.19
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4109.33
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4120.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8109.39
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4272.48
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5186.84
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6227.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6119.32
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6112.62
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E193.76
Mouse Schwann, donor1.CNhs12507.11728-123D915.07
Mouse Schwann, donor2.CNhs12573.11746-123F923.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.33
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.79
Mouse hepatocyte, donor6.CNhs13090.11822-124F416.24
Mouse hepatocyte, donor8.CNhs13091.11824-124F612.54
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A722.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G633.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.57
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B626.49
accessory axillary lymph node, adult.CNhs10475.1063-29H98.54
adrenal gland, adult.CNhs10508.49-24D715.73
adrenal gland, embryo E14.CNhs11038.406-44C513.88
adrenal gland, embryo E16.CNhs11004.1254-43D617.35
adrenal gland, embryo E17.CNhs11043.1263-45I114.30
adrenal gland, embryo E18.CNhs11026.1262-18F514.17
adrenal gland, neonate N00.CNhs11191.1311-23C116.70
adrenal gland, neonate N25.CNhs11223.1377-27I310.05
amnion, adult pregnant day17.5.CNhs10488.583-22A823.73
aorta, adult.CNhs10498.46-23H15.78
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F510.19
bone (os femoris), neonate N16.CNhs11225.1525-43A65.74
bone (os femoris), neonate N20.CNhs11195.1350-25C38.73
cecum, adult.CNhs10467.37-13H448.46
cerebellum, adult.CNhs10494.15-8B2169.81
cerebellum, neonate N30.CNhs11135.1395-42I2159.18
colon, adult.CNhs10468.36-18H789.92
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A4220.49
corpus striatum, adult.CNhs10487.19-21D8179.80
corpus striatum, neonate N00.CNhs11226.630-43F1126.28
cortex, adult.CNhs10473.12-14D5293.07
cortex, neonate N30.CNhs11107.1392-42F2229.38
diencephalon, adult.CNhs10482.20-12F2230.64
diencephalon, neonate N30.CNhs11201.1388-42B2201.67
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.89
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.58
epididymis, adult.CNhs10490.58-23B216.93
eyeball, adult.CNhs10484.31-12G448.82
eyeball, embryo E12.CNhs11016.345-16C67.55
eyeball, embryo E14.CNhs10521.399-16E216.32
eyeball, embryo E15.CNhs10593.426-16C920.53
eyeball, embryo E17.CNhs11023.1261-18D426.83
eyeball, neonate N00.CNhs11207.633-15C634.49
eyeball, neonate N01.CNhs11140.1532-43E734.98
eyeball, neonate N02.CNhs11205.1551-44G841.32
eyeball, neonate N16.CNhs11188.777-19A2101.67
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H25.67
forelimb, embryo E13.CNhs10589.384-1E28.45
forelimb, embryo E14.CNhs10577.413-26A813.15
forelimb, embryo E15.CNhs11007.437-20E712.23
forelimb, embryo E17.CNhs10598.1517-43C410.45
forelimb, embryo E18.CNhs11008.1520-43B511.32
gonad, embryo E13.CNhs11044.1564-45I611.74
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E99.32
heart, embryo E12.CNhs11015.353-12F55.16
heart, embryo E13.CNhs11013.376-3I95.58
heart, embryo E14.CNhs10597.403-26D49.47
heart, embryo E15.CNhs11017.431-16C87.48
heart, embryo E16.CNhs11021.457-17C68.79
heart, embryo E17.CNhs11025.479-18E56.05
heart, embryo E18.CNhs11030.1283-20G36.44
heart, neonate N00.CNhs11213.639-21E35.72
heart, neonate N03.CNhs11221.1349-25I27.41
heart, neonate N10.CNhs11118.749-24G111.33
heart, neonate N16.CNhs11209.782-15G18.35
heart, neonate N20.CNhs11127.821-26I68.92
heart, neonate N25.CNhs11196.1351-25D310.32
heart, neonate N30.CNhs11202.1390-42D26.17
hippocampus, adult.CNhs10478.13-16E8229.01
hippocampus, neonate N00.CNhs11228.627-43G1100.74
intestinal mucosa, adult.CNhs10506.860-29I3342.97
intestine, adult.CNhs10496.178-9A371.40
intestine, embryo E12.CNhs11019.1251-16I57.25
intestine, embryo E13.CNhs11010.381-16D59.29
intestine, embryo E15.CNhs10602.976-16D810.18
intestine, embryo E16.CNhs10585.463-22H410.69
intestine, embryo E17.CNhs10582.482-18D311.56
intestine, embryo E18.CNhs10526.1289-20F714.84
intestine, neonate N00.CNhs11126.644-26D183.04
intestine, neonate N01.CNhs11192.1322-23E925.20
intestine, neonate N06.CNhs11102.688-20B823.88
intestine, neonate N07.CNhs11095.720-20F226.06
intestine, neonate N10.CNhs11098.755-23A518.13
intestine, neonate N20.CNhs11187.827-18D176.40
intestine, neonate N25.CNhs11121.1352-25E367.00
intestine, neonate N30.CNhs11131.1384-42G191.41
kidney, embryo E14.CNhs10606.411-4I98.91
kidney, embryo E15.CNhs10997.434-16F810.51
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I29.98
kidney, embryo E18.CNhs11001.1288-20C712.22
kidney, neonate N00.CNhs11214.646-21G718.10
kidney, neonate N10.CNhs11206.758-6D523.78
kidney, neonate N20.CNhs11113.832-19I128.34
kidney, neonate N25.CNhs11122.1353-25F327.00
kidney, neonate N30.CNhs11203.1385-42H125.30
liver, adult pregnant day01.CNhs10466.508-5B213.93
liver, embryo E12.CNhs10601.355-15F88.34
liver, embryo E13.CNhs10524.378-3H69.24
liver, embryo E14.CNhs10594.409-16E110.34
liver, embryo E15.CNhs10520.433-16D710.95
liver, embryo E16.CNhs10523.462-17F510.13
liver, embryo E17.CNhs10510.481-18A312.48
liver, embryo E18.CNhs10579.499-43G411.80
liver, neonate N00.CNhs11117.641-24F412.16
liver, neonate N03.CNhs11123.1345-25G217.02
liver, neonate N06.CNhs11101.684-20A837.38
liver, neonate N07.CNhs11103.716-20H236.47
liver, neonate N10.CNhs11115.751-24B940.56
liver, neonate N20.CNhs11220.823-25A331.32
liver, neonate N25.CNhs11198.1368-26H119.73
liver, neonate N30.CNhs11106.1382-42D115.44
lung, adult.CNhs10474.28-22B14.25
lung, embryo E12.CNhs10522.354-16G25.87
lung, embryo E14.CNhs10604.404-26F84.24
lung, embryo E15.CNhs11020.432-17C53.73
lung, embryo E16.CNhs10998.458-17B63.99
lung, embryo E17.CNhs10605.480-44A66.37
lung, embryo E18.CNhs10583.1287-20I64.28
lung, neonate N00.CNhs11224.640-42C66.44
lung, neonate N06.CNhs11212.683-20E57.57
lung, neonate N07.CNhs11111.715-19A37.97
lung, neonate N10.CNhs11219.750-23E610.52
lung, neonate N20.CNhs11109.822-18A44.75
lung, neonate N25.CNhs11119.1359-25C75.87
lung, neonate N30.CNhs11133.1394-42H24.05
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A137.70
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A159.83
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C2187.20
medulla oblongata, neonate N30.CNhs11200.1396-42A3189.65
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.69
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.31
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E121.45
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.62
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E337.27
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D740.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D839.21
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D943.88
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D424.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D526.89
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D626.88
olfactory brain, adult.CNhs10489.18-22I9216.25
ovary, adult.CNhs10507.91-2I711.36
ovary, embryo E18.CNhs11040.505-44H718.87
ovary, neonate N00.CNhs11217.1299-22I415.15
oviduct, adult pregnant day01.CNhs10500.988-6G612.21
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F412.38
pancreas, embryo E15.CNhs11042.1556-45F213.00
pancreas, embryo E16.CNhs11003.460-26E57.73
pancreas, embryo E17.CNhs10599.1558-45G314.47
pancreas, embryo E18.CNhs10580.1535-43I713.53
pancreas, neonate N00.CNhs11105.645-26G913.44
pancreas, neonate N01.CNhs11138.1531-43D721.81
pancreas, neonate N02.CNhs11139.1539-43D812.83
pancreas, neonate N16.CNhs11136.787-43B67.90
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G839.83
pituitary gland, embryo E12.CNhs11018.346-16E611.52
pituitary gland, embryo E13.CNhs11009.370-44C716.69
pituitary gland, embryo E14.CNhs11037.398-44A513.93
pituitary gland, embryo E15.CNhs10592.427-16B913.83
pituitary gland, embryo E16.CNhs11036.449-43F624.44
pituitary gland, embryo E17.CNhs11039.1265-44F526.16
pituitary gland, neonate N00.CNhs11190.1308-22E935.62
placenta, adult pregnant day10.CNhs10472.539-13I716.43
placenta, adult pregnant day17.CNhs10464.577-18G336.86
prostate, adult.CNhs10470.859-1F83.75
skin, adult.CNhs10492.30-1C36.27
skin, neonate N00.CNhs11124.650-25G410.50
skin, neonate N03.CNhs11215.662-22H37.18
skin, neonate N06.CNhs11097.693-20I55.61
skin, neonate N10.CNhs11108.762-6C44.43
small intestine, neonate N16.CNhs11114.790-21I159.17
spinal cord, adult.CNhs10505.24-13C9168.92
spleen, adult.CNhs10465.25-2G25.30
spleen, embryo E16.CNhs11035.461-43C110.94
spleen, embryo E18.CNhs11011.1271-21F27.22
spleen, neonate N10.CNhs11116.752-24D18.48
spleen, neonate N20.CNhs11112.824-19H14.10
spleen, neonate N25.CNhs11099.1354-25G36.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H6118.38
stomach, embryo E12.CNhs10588.356-43E39.96
stomach, embryo E15.CNhs10603.1252-16G814.64
stomach, embryo E16.CNhs11022.459-17D418.47
stomach, embryo E17.CNhs11006.1035-18D527.18
stomach, embryo E18.CNhs10999.1286-20C630.13
stomach, neonate N03.CNhs11193.1340-24B843.56
stomach, neonate N07.CNhs11210.718-18A946.95
stomach, neonate N25.CNhs11104.1355-25E464.13
stomach, neonate N30.CNhs11134.1386-42I159.23
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F510.02
testis, embryo E15.CNhs11034.443-27C513.07
testis, embryo E16.CNhs11033.470-26G518.47
testis, embryo E17.CNhs11029.486-18I518.73
testis, embryo E18.CNhs11027.503-18G518.59
testis, neonate N00.CNhs11189.1300-22B717.13
testis, neonate N07.CNhs11222.726-26I422.13
testis, neonate N10.CNhs11204.763-44D914.89
testis, neonate N20.CNhs11110.839-18H34.35
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I46.08
thymus, embryo E15.CNhs11005.430-45I24.31
thymus, embryo E16.CNhs11002.456-26C52.73
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C42.12
thymus, neonate N07.CNhs11211.713-19D31.45
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A21.85
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G22.22
tongue, adult.CNhs10499.32-1B43.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.33
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.04
urinary bladder, adult.CNhs10481.879-12E490.61
uterus, adult pregnant day19.CNhs10497.590-15F519.14
uterus, adult.CNhs10509.92-27E515.02
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1233.24
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2237.07
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3222.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7319.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4244.57
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5250.79
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6230.86
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7240.92
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8224.76
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9230.40
whole body, embryo E11.CNhs11014.324-5I84.67
whole body, embryo E12.CNhs10587.857-27C919.15
whole body, embryo E13.CNhs10512.372-23H217.59
whole body, embryo E14.5.CNhs10578.420-27D219.69
whole body, embryo E14.CNhs10519.395-14B114.67
whole body, embryo E16.CNhs10514.453-14F217.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G527.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G522.79
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G524.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G520.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.24
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G520.51
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G522.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G521.77
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G520.63
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G522.38
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G519.37
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G521.34
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.36
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.31
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G521.95
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G519.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G519.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.22
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G521.86
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G524.13
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G524.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G521.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G523.40
whole body, embryo E17.5.CNhs10513.490-9F919.29
whole body, embryo E17.CNhs10517.475-3I545.72
whole body, embryo E18.CNhs10516.493-3B323.39
whole body, neonate N00.CNhs10525.657-19C226.21
whole body, neonate N01.CNhs10576.659-23C616.45
whole body, neonate N06.CNhs10515.692-21D119.19
whole body, neonate N10.CNhs10518.761-6B415.30





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell9.68e-1544
neurectodermal cell9.68e-1544
neural cell1.47e-1443
neuron1.69e-1233
neuronal stem cell1.69e-1233
neuroblast1.69e-1233
electrically signaling cell1.69e-1233
CNS neuron (sensu Vertebrata)3.50e-1223
neuroblast (sensu Vertebrata)3.50e-1223
electrically responsive cell5.93e-1139
electrically active cell5.93e-1139
embryonic cell7.03e-1170

Uber anatomy
Ontology termp-valuen
central nervous system1.26e-2973
nervous system2.23e-2975
regional part of nervous system2.86e-2454
ectoderm-derived structure8.40e-2495
ectoderm8.40e-2495
presumptive ectoderm8.40e-2495
neurectoderm3.07e-2364
neural plate3.07e-2364
presumptive neural plate3.07e-2364
neural tube8.38e-2352
neural rod8.38e-2352
future spinal cord8.38e-2352
neural keel8.38e-2352
brain3.93e-2047
future brain3.93e-2047
regional part of brain1.65e-1946
gray matter7.34e-1934
ecto-epithelium3.46e-1873
pre-chordal neural plate4.56e-1749
anterior neural tube1.27e-1640
brain grey matter2.59e-1629
regional part of telencephalon2.59e-1629
telencephalon2.59e-1629
regional part of forebrain5.17e-1639
forebrain5.17e-1639
future forebrain5.17e-1639
structure with developmental contribution from neural crest5.71e-1392
cerebral cortex6.26e-1221
cerebral hemisphere6.26e-1221
pallium6.26e-1221
regional part of cerebral cortex2.60e-1017
organ system subdivision6.08e-09194
occipital lobe6.96e-0810
visual cortex6.96e-0810
neocortex6.96e-0810
posterior neural tube7.37e-0712
chordal neural plate7.37e-0712
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