FFCP PHASE1:Mm9::chr18:36124690..36124741,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74002 | |EntrezGene=74002 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q6P1I6 | |UniProt=Q6P1I6 | ||
|association_with_transcript=201bp_to_ENSMUST00000115716,NM_028707,uc008ena.1,uc008enb.1,uc008enc.1,uc008end.1,uc012bbk.1_5end | |association_with_transcript=201bp_to_ENSMUST00000115716,NM_028707,uc008ena.1,uc008enb.1,uc008enc.1,uc008end.1,uc012bbk.1_5end | ||
|cluster_id=chr18:36124690..36124741,+ | |||
|description=CAGE_peak_1_at_Psd2_5end | |description=CAGE_peak_1_at_Psd2_5end | ||
|id=chr18:36124690..36124741,+ | |id=chr18:36124690..36124741,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.94e-16!23;CL:0000337!1.94e-16!23;CL:0002319!1.29e-15!43;CL:0000221!1.46e-15!44;CL:0000133!1.46e-15!44;CL:0000540!2.07e-13!33;CL:0000047!2.07e-13!33;CL:0000031!2.07e-13!33;CL:0000404!2.07e-13!33;CL:0000055!1.15e-10!50;CL:0000393!5.84e-09!39;CL:0000211!5.84e-09!39 | |ontology_enrichment_celltype=CL:0000117!1.94e-16!23;CL:0000337!1.94e-16!23;CL:0002319!1.29e-15!43;CL:0000221!1.46e-15!44;CL:0000133!1.46e-15!44;CL:0000540!2.07e-13!33;CL:0000047!2.07e-13!33;CL:0000031!2.07e-13!33;CL:0000404!2.07e-13!33;CL:0000055!1.15e-10!50;CL:0000393!5.84e-09!39;CL:0000211!5.84e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.95e-21,23;CL:0000337,1.95e-21,23;CL:0002319,6.15e-16,43;CL:0000221,2.74e-15,44;CL:0000133,2.74e-15,44;CL:0000540,7.34e-13,33;CL:0000047,7.34e-13,33;CL:0000031,7.34e-13,33;CL:0000404,7.34e-13,33;CL:0000393,1.88e-09,39;CL:0000211,1.88e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.35e-33!73;UBERON:0005743!3.35e-33!73;UBERON:0000073!9.24e-32!75;UBERON:0001016!9.24e-32!75;UBERON:0004121!2.50e-30!102;UBERON:0000924!2.50e-30!102;UBERON:0006601!2.50e-30!102;UBERON:0002346!7.43e-28!71;UBERON:0003075!7.43e-28!71;UBERON:0007284!7.43e-28!71;UBERON:0001049!8.94e-28!52;UBERON:0005068!8.94e-28!52;UBERON:0006241!8.94e-28!52;UBERON:0007135!8.94e-28!52;UBERON:0000033!2.29e-27!63;UBERON:0000955!2.57e-26!50;UBERON:0006238!2.57e-26!50;UBERON:0002616!1.07e-25!49;UBERON:0003056!1.45e-21!49;UBERON:0002020!5.03e-21!34;UBERON:0003080!1.03e-19!40;UBERON:0002780!6.01e-19!39;UBERON:0001890!6.01e-19!39;UBERON:0006240!6.01e-19!39;UBERON:0002791!1.33e-17!29;UBERON:0003528!1.33e-17!29;UBERON:0001893!1.33e-17!29;UBERON:0007811!3.78e-14!86;UBERON:0000153!5.56e-14!94;UBERON:0000956!4.13e-12!21;UBERON:0001869!4.13e-12!21;UBERON:0000203!4.13e-12!21;UBERON:0002619!6.19e-10!17;UBERON:0003076!1.46e-08!12;UBERON:0003057!1.46e-08!12;UBERON:0002420!8.98e-07!8;UBERON:0007245!8.98e-07!8;UBERON:0010009!8.98e-07!8;UBERON:0010011!8.98e-07!8;UBERON:0000454!8.98e-07!8 | |ontology_enrichment_uberon=UBERON:0001017!3.35e-33!73;UBERON:0005743!3.35e-33!73;UBERON:0000073!9.24e-32!75;UBERON:0001016!9.24e-32!75;UBERON:0004121!2.50e-30!102;UBERON:0000924!2.50e-30!102;UBERON:0006601!2.50e-30!102;UBERON:0002346!7.43e-28!71;UBERON:0003075!7.43e-28!71;UBERON:0007284!7.43e-28!71;UBERON:0001049!8.94e-28!52;UBERON:0005068!8.94e-28!52;UBERON:0006241!8.94e-28!52;UBERON:0007135!8.94e-28!52;UBERON:0000033!2.29e-27!63;UBERON:0000955!2.57e-26!50;UBERON:0006238!2.57e-26!50;UBERON:0002616!1.07e-25!49;UBERON:0003056!1.45e-21!49;UBERON:0002020!5.03e-21!34;UBERON:0003080!1.03e-19!40;UBERON:0002780!6.01e-19!39;UBERON:0001890!6.01e-19!39;UBERON:0006240!6.01e-19!39;UBERON:0002791!1.33e-17!29;UBERON:0003528!1.33e-17!29;UBERON:0001893!1.33e-17!29;UBERON:0007811!3.78e-14!86;UBERON:0000153!5.56e-14!94;UBERON:0000956!4.13e-12!21;UBERON:0001869!4.13e-12!21;UBERON:0000203!4.13e-12!21;UBERON:0002619!6.19e-10!17;UBERON:0003076!1.46e-08!12;UBERON:0003057!1.46e-08!12;UBERON:0002420!8.98e-07!8;UBERON:0007245!8.98e-07!8;UBERON:0010009!8.98e-07!8;UBERON:0010011!8.98e-07!8;UBERON:0000454!8.98e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.57e-36,54;UBERON:0001017,6.58e-36,73;UBERON:0001016,2.66e-34,75;UBERON:0001049,7.15e-34,52;UBERON:0005068,7.15e-34,52;UBERON:0006241,7.15e-34,52;UBERON:0007135,7.15e-34,52;UBERON:0002346,5.99e-33,64;UBERON:0003075,5.99e-33,64;UBERON:0007284,5.99e-33,64;UBERON:0004121,1.63e-30,95;UBERON:0000924,1.63e-30,95;UBERON:0006601,1.63e-30,95;UBERON:0000955,5.72e-29,47;UBERON:0006238,5.72e-29,47;UBERON:0002616,3.60e-28,46;UBERON:0010371,3.90e-28,73;UBERON:0002020,1.41e-27,34;UBERON:0003056,5.94e-25,49;UBERON:0003080,2.82e-23,40;UBERON:0003528,5.37e-23,29;UBERON:0002791,5.37e-23,29;UBERON:0001893,5.37e-23,29;UBERON:0002780,2.79e-22,39;UBERON:0001890,2.79e-22,39;UBERON:0006240,2.79e-22,39;UBERON:0010314,2.30e-19,92;UBERON:0000956,1.19e-15,21;UBERON:0001869,1.19e-15,21;UBERON:0000203,1.19e-15,21;UBERON:0002619,9.59e-13,17;UBERON:0003076,6.52e-11,12;UBERON:0003057,6.52e-11,12;UBERON:0002420,1.57e-08,8;UBERON:0007245,1.57e-08,8;UBERON:0010009,1.57e-08,8;UBERON:0010011,1.57e-08,8;UBERON:0000454,1.57e-08,8;UBERON:0002021,7.93e-08,10;UBERON:0000411,7.93e-08,10;UBERON:0001950,7.93e-08,10;UBERON:0000025,8.79e-07,114 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,4.08207792725135,0.198581902401771,0.261199789138935,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,13.7355848519681,8.34807494390993,15.5543919259427,8.9591309840232,10.062679505548,0,0,0,0,0,0,35.8100135721488,42.8482693210347,39.9313784208893,0,0,0,0,0,13.7816050838466,18.8266969607562,16.9014068062819,26.191152036348,20.6118462124354,36.2776750192831,32.2468069789356,25.1106138390656,24.1530586965956,39.5264078242309,48.450987639731,29.1127130834228,37.6336006477797,41.2804080595507,46.0182847320121,50.5285969440057,33.5019598801657,35.4540444319958,36.213184723104,37.4178303551558,34.7386901149811,31.8743052361264,0.075726193333184,0,0,0,0,0.539703191637817,0,0,1.40444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0.148442139064825,1.21439728736295,1.82679286987285,0,0.904335843315735,1.41106448562846,0,0,0.144599356919912,0,0.161766849947409,0,0,0,48.0160507098937,42.5176814831314,0,0,0,0,42.8401228697793,22.4175295381127,33.5497120141348,21.0327427432655,16.8772201838018,33.2460871295296,28.3922210368576,0.305518091550949,0,0.252722758433675,0.841767423545896,2.08192708740326,2.29902104433473,3.96136685571768,3.76762044589288,4.76255494059295,4.09963904911519,3.09215691047105,2.84573707812917,0.431135985865684,0.756424320671277,0.703804496655795,0.43839146485515,0.556094498451196,0,0.61734640922383,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.308534225774757,0,0,0,0,0,0.0810688095458557,0,0,0,14.930586348053,27.1668176681311,0,0,0,1.16118335930219,0.902072229254653,0.403367049246685,0.667134131534611,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.913988100877831,1.1270773567308,0.203651327845314,0,0.280543279561274,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32643988239339,0.814824882210129,1.01847051465113,0.469380496577004,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0.491764273019036,1.37968373152366,38.3715910070823,39.5003383815725,0,0,0.94652465824877,0.780877488593277,0.215423397732799,0,0.445597348164788,0.849229592366497,0,0.876767573733936,0.790575555893047,19.6006003017302,0,0.178065603667255,0.325773918707152,0,0,0,0.604647113929502,0.377210159511796,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0.340439605753788,1.44048875225048,1.55230420539305,0.643011105094777,2.12808280370728,0.891844088010353,1.48094118541909,1.2178597964584,0.23467170806371,0,0.441056796109924,0,0.322928853391811,0.180938774784468,0.358117032009409,0.164140899745061,0,33.5619796639022,0,0.412773735926445,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.316335993581135,1.01659733563424,0.972048067396211,1.46361807210128,0.436725127492355,0.404593039154462,0.0826534557253359,0,0.388844919875379,0.621339313086926,0.56369293868419,0.598066184175915,0.496375471371293,2.13896307178452,0.774958940866387,0.844780627453891,1.29092962510329,0.911430693907651,0.524296722128554,0.241584120826006,0,0,0.405450430580328,0.410843828659309,0,0,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0.965947970160952,0,0,0,0,13.5540442228096,15.651058041244,10.3121192419091,15.9823459579629,18.4972280338073,22.661816921691,15.5255175053315,18.0128481289688,15.8599843144472,17.0860902878101,2.90604573235695,5.98537310101547,6.65861062441123,5.34834777550247,7.96530017986333,7.53758384645058,8.44537565646138,6.59312183164461,6.4183841918363,4.29585259998456,5.57654459758527,6.22466926574051,4.775716880964,5.57018825922363,5.11175673704958,0.952587382566147,4.86714168968393,3.8581844092741,5.76920261124629,5.7407578852415,5.48590803816665,5.14679837862079,7.39152188836695,4.65108533223451,5.64656282491984,5.58456412085065,5.3049112133104,6.57674278594607,5.43216455383447,6.17256498823512,4.74540072496697,5.31924204828043,2.45538625901814,5.88759996506671,5.5942917184531,12.2407183189594,4.21076895201735,4.72716318906256,1.72159498861959,0.882365676478062,1.15933917810211 | |phase1_expression=1.76163731815273,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,4.08207792725135,0.198581902401771,0.261199789138935,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,13.7355848519681,8.34807494390993,15.5543919259427,8.9591309840232,10.062679505548,0,0,0,0,0,0,35.8100135721488,42.8482693210347,39.9313784208893,0,0,0,0,0,13.7816050838466,18.8266969607562,16.9014068062819,26.191152036348,20.6118462124354,36.2776750192831,32.2468069789356,25.1106138390656,24.1530586965956,39.5264078242309,48.450987639731,29.1127130834228,37.6336006477797,41.2804080595507,46.0182847320121,50.5285969440057,33.5019598801657,35.4540444319958,36.213184723104,37.4178303551558,34.7386901149811,31.8743052361264,0.075726193333184,0,0,0,0,0.539703191637817,0,0,1.40444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0.148442139064825,1.21439728736295,1.82679286987285,0,0.904335843315735,1.41106448562846,0,0,0.144599356919912,0,0.161766849947409,0,0,0,48.0160507098937,42.5176814831314,0,0,0,0,42.8401228697793,22.4175295381127,33.5497120141348,21.0327427432655,16.8772201838018,33.2460871295296,28.3922210368576,0.305518091550949,0,0.252722758433675,0.841767423545896,2.08192708740326,2.29902104433473,3.96136685571768,3.76762044589288,4.76255494059295,4.09963904911519,3.09215691047105,2.84573707812917,0.431135985865684,0.756424320671277,0.703804496655795,0.43839146485515,0.556094498451196,0,0.61734640922383,0.199034266818493,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0.308534225774757,0,0,0,0,0,0.0810688095458557,0,0,0,14.930586348053,27.1668176681311,0,0,0,1.16118335930219,0.902072229254653,0.403367049246685,0.667134131534611,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.913988100877831,1.1270773567308,0.203651327845314,0,0.280543279561274,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32643988239339,0.814824882210129,1.01847051465113,0.469380496577004,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0.491764273019036,1.37968373152366,38.3715910070823,39.5003383815725,0,0,0.94652465824877,0.780877488593277,0.215423397732799,0,0.445597348164788,0.849229592366497,0,0.876767573733936,0.790575555893047,19.6006003017302,0,0.178065603667255,0.325773918707152,0,0,0,0.604647113929502,0.377210159511796,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0.340439605753788,1.44048875225048,1.55230420539305,0.643011105094777,2.12808280370728,0.891844088010353,1.48094118541909,1.2178597964584,0.23467170806371,0,0.441056796109924,0,0.322928853391811,0.180938774784468,0.358117032009409,0.164140899745061,0,33.5619796639022,0,0.412773735926445,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0.316335993581135,1.01659733563424,0.972048067396211,1.46361807210128,0.436725127492355,0.404593039154462,0.0826534557253359,0,0.388844919875379,0.621339313086926,0.56369293868419,0.598066184175915,0.496375471371293,2.13896307178452,0.774958940866387,0.844780627453891,1.29092962510329,0.911430693907651,0.524296722128554,0.241584120826006,0,0,0.405450430580328,0.410843828659309,0,0,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0.965947970160952,0,0,0,0,13.5540442228096,15.651058041244,10.3121192419091,15.9823459579629,18.4972280338073,22.661816921691,15.5255175053315,18.0128481289688,15.8599843144472,17.0860902878101,2.90604573235695,5.98537310101547,6.65861062441123,5.34834777550247,7.96530017986333,7.53758384645058,8.44537565646138,6.59312183164461,6.4183841918363,4.29585259998456,5.57654459758527,6.22466926574051,4.775716880964,5.57018825922363,5.11175673704958,0.952587382566147,4.86714168968393,3.8581844092741,5.76920261124629,5.7407578852415,5.48590803816665,5.14679837862079,7.39152188836695,4.65108533223451,5.64656282491984,5.58456412085065,5.3049112133104,6.57674278594607,5.43216455383447,6.17256498823512,4.74540072496697,5.31924204828043,2.45538625901814,5.88759996506671,5.5942917184531,12.2407183189594,4.21076895201735,4.72716318906256,1.72159498861959,0.882365676478062,1.15933917810211 | ||
|short_description=p1@Psd2 | |short_description=p1@Psd2 | ||
}} | }} |
Latest revision as of 05:06, 27 September 2015
Short description: | p1@Psd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Psd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 201bp_to_ENSMUST00000115716, NM_028707, uc008ena.1, uc008enb.1, uc008enc.1, uc008end.1, uc012bbk.1_5end |
EntrezGene: | Psd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.95e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.95e-21 | 23 |
neural cell | 6.15e-16 | 43 |
ectodermal cell | 2.74e-15 | 44 |
neurectodermal cell | 2.74e-15 | 44 |
neuron | 7.34e-13 | 33 |
neuronal stem cell | 7.34e-13 | 33 |
neuroblast | 7.34e-13 | 33 |
electrically signaling cell | 7.34e-13 | 33 |
electrically responsive cell | 1.88e-09 | 39 |
electrically active cell | 1.88e-09 | 39 |