FFCP PHASE1:Mm9::chr18:34166908..34167015,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13824 | |EntrezGene=13824 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2806 | |||
|TSSclassifier=NA | |||
|UniProt=P52963,Q3USC8 | |UniProt=P52963,Q3USC8 | ||
|association_with_transcript=-48bp_to_ENSMUST00000025234,NM_013512,uc008ejz.1_5end | |association_with_transcript=-48bp_to_ENSMUST00000025234,NM_013512,uc008ejz.1_5end | ||
|cluster_id=chr18:34166908..34167015,- | |||
|description=CAGE_peak_2_at_Epb4.1l4a_5end | |description=CAGE_peak_2_at_Epb4.1l4a_5end | ||
|id=chr18:34166908..34167015,- | |id=chr18:34166908..34167015,- | ||
|ontology_enrichment_celltype=CL:0000540!5.06e-16!33;CL:0000047!5.06e-16!33;CL:0000031!5.06e-16!33;CL:0000404!5.06e-16!33;CL:0000221!2.80e-15!44;CL:0000133!2.80e-15!44;CL:0002319!9.15e-15!43;CL:0000393!1.35e-11!39;CL:0000211!1.35e-11!39;CL:0000055!1.88e-10!50;CL:0000117!5.51e-10!23;CL:0000337!5.51e-10!23;CL:0000107!4.87e-07!9 | |ontology_enrichment_celltype=CL:0000540!5.06e-16!33;CL:0000047!5.06e-16!33;CL:0000031!5.06e-16!33;CL:0000404!5.06e-16!33;CL:0000221!2.80e-15!44;CL:0000133!2.80e-15!44;CL:0002319!9.15e-15!43;CL:0000393!1.35e-11!39;CL:0000211!1.35e-11!39;CL:0000055!1.88e-10!50;CL:0000117!5.51e-10!23;CL:0000337!5.51e-10!23;CL:0000107!4.87e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.20e-17,33;CL:0000047,4.20e-17,33;CL:0000031,4.20e-17,33;CL:0000404,4.20e-17,33;CL:0000221,1.52e-16,44;CL:0000133,1.52e-16,44;CL:0002319,5.47e-16,43;CL:0000393,4.88e-12,39;CL:0000211,4.88e-12,39;CL:0000117,1.29e-10,23;CL:0000337,1.29e-10,23;CL:0000107,1.89e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.23e-15!102;UBERON:0000924!5.23e-15!102;UBERON:0006601!5.23e-15!102;UBERON:0000073!8.17e-12!75;UBERON:0001016!8.17e-12!75;UBERON:0001017!2.76e-11!73;UBERON:0005743!2.76e-11!73;UBERON:0000468!5.78e-10!333;UBERON:0000922!6.94e-09!328;UBERON:0002346!6.12e-08!71;UBERON:0003075!6.12e-08!71;UBERON:0007284!6.12e-08!71;UBERON:0000010!2.48e-07!11;UBERON:0002410!4.87e-07!9 | |ontology_enrichment_uberon=UBERON:0004121!5.23e-15!102;UBERON:0000924!5.23e-15!102;UBERON:0006601!5.23e-15!102;UBERON:0000073!8.17e-12!75;UBERON:0001016!8.17e-12!75;UBERON:0001017!2.76e-11!73;UBERON:0005743!2.76e-11!73;UBERON:0000468!5.78e-10!333;UBERON:0000922!6.94e-09!328;UBERON:0002346!6.12e-08!71;UBERON:0003075!6.12e-08!71;UBERON:0007284!6.12e-08!71;UBERON:0000010!2.48e-07!11;UBERON:0002410!4.87e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.60e-15,95;UBERON:0000924,2.60e-15,95;UBERON:0006601,2.60e-15,95;UBERON:0001016,1.77e-11,75;UBERON:0001017,6.29e-11,73;UBERON:0010314,7.13e-09,92;UBERON:0010371,9.08e-09,73;UBERON:0002346,5.12e-08,64;UBERON:0003075,5.12e-08,64;UBERON:0007284,5.12e-08,64;UBERON:0000010,9.13e-08,11;UBERON:0000922,1.80e-07,320;UBERON:0002410,1.89e-07,9 | |||
|phase1_expression=3.36312578920067,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.27564935226605,0.0992909512008853,0,0,0,0,0,0,1.14014051673824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.811015449756117,0,0,3.92445281484804,1.75748946187577,1.74986909166855,1.53985063787899,1.43752564364972,0,0,0,0,0.286533439938757,1.03134418455488,20.8385954685386,15.340738398889,12.0427966666174,0,0,0.449949858640699,0.988866362566974,0,1.49800055259202,1.92109152660777,1.03689612308478,2.56511282830212,1.68259969081106,5.99867067247988,4.41737081903227,3.55223317723367,2.58782771749238,4.5960939330501,3.30347642998166,2.68143409978894,4.76180253094355,15.0350368012421,14.1805847583735,16.1483144872596,2.79182999001381,1.68828783009504,3.81995619442025,5.59794312399969,6.12198227436143,10.4383689662168,2.49896437999507,3.17400552448499,3.76823835312181,0,0,0,0,0,0.421333260395256,0.852151612890289,0.519572009205738,0.70667914902068,4.3661460130771,0,2.54805239706646,0,0.432982082022428,1.26679932737549,1.01104889002957,0.34255163915718,0,0.890652834388949,1.38788261412909,0.608930956624282,2.53677046981664,1.80867168663147,1.99900802130698,0.502666365318702,1.23597483867187,2.31358971071859,0,1.29413479957927,0.662524555381181,0,1.86391761218122,0.292780797011547,0.41889341362691,0.766371165625774,0.11981512450592,0,0.127070227073065,3.14560342750128,0.457500602818626,1.25654352112864,0.869121600961382,0.255715457330331,2.49345653471472,0.973447578406546,2.44414473240759,0.746441823660558,0.252722758433675,1.68353484709179,4.42409506073193,9.88579049063934,10.803727788321,11.0014517020072,11.1579858608178,11.2740073850668,8.99536555773397,1.29351685369508,1.29340795759705,3.02569728268511,1.58356011747554,2.6303487891309,2.50242524303038,2.43776516565517,1.85203922767149,3.58261680273288,0,0,0,1.86413195281952,1.17263029990548,0.720248245844059,1.42046841351126,4.9191057936851,2.77680803197281,2.79040733700489,2.68273401399619,2.33530684734339,3.45575684818309,1.64167464079095,3.08061476274252,2.77779976108131,1.75640092232841,1.74468344388483,1.26173969138476,6.27718135513635,0.330418782983798,0.264450566663544,1.49301775374664,2.78684006232526,3.35055399437443,2.42020229548011,2.00140239460383,2.28270751335071,0.949058123089023,1.4822905925161,1.75934646160189,1.79060824837036,1.55971269695296,0.898819408654221,0.216138049874694,1.1948476395262,2.27601481143698,1.94222471436539,3.38123207019241,2.8511185898344,4.07300223052014,3.64706263429657,2.52946148497029,1.32849133181642,1.255989822731,0.740382983530803,0.296452627087149,0.83422552858047,0.393117990226406,0.224862112384854,0.405720242777006,0.482354319504834,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0,0,0.739012760666419,2.84237117655727,1.95557971730431,2.20668611507745,3.05097322775053,2.34508760418542,1.6663054862021,1.36593553500459,2.20689201748667,2.87904096543407,2.87018583583477,1.47476983244164,1.20879487306127,0.867894351489069,0,0,0,0.551873492609465,3.37156238974363,2.22702204525186,0.491804836130026,0.504941854408746,7.88770548540642,8.98009111882268,14.0025208526319,10.2756583119597,11.8083297263669,15.0030561318081,7.2865926301481,11.3979784585412,10.6727700045561,3.21321316421807,1.41940085208269,2.67098405500883,3.25773918707152,2.63952196756057,1.32745138339963,1.69946445308487,2.41858845571801,0.377210159511796,1.47650946440386,0.922305443831782,2.32585463851399,1.81766864738753,1.06949213515416,1.58018378967908,0,1.03135543248187,2.04263763452273,3.78128297465751,2.06973894052407,3.21505552547388,3.19212420556092,3.38900753443934,2.46823530903181,2.43571959291679,0.938686832254841,1.0591603543191,0.661585194164886,2.14352128823924,3.39075296061402,2.17126529741361,1.90995750405018,2.79039529566604,1.1659233465194,3.15223013417866,0,2.47664241555867,0.370389054739423,0.188368457004691,0,0,0.509935289981566,0.69975726161829,0.690999869022119,0.954670618015114,2.68885594543965,3.04979200690273,2.48412283890143,1.04544148007234,2.83871332870031,1.61837215661785,2.64491058321075,1.04702376793612,0.518459893167171,0.621339313086926,0,1.49516546043979,0.66183396182839,1.94451188344048,1.54991788173277,0.506868376472335,1.05621514781179,1.17183946359555,0.734015410979976,0.241584120826006,1.15212002503146,0.632022241256357,1.21635129174099,0.718976700153791,0.129920822977795,0.358053391334963,0.39736270956253,0.600977247599844,0,0.201932899896295,0.15241361331,0.504130925684203,0.194915761479505,0,0,2.72076460338254,0.887943813496259,0.0897138566094757,0.671538465456314,1.54551675225752,1.12609485270709,2.38097111547445,2.35805216986972,4.01257683228291,1.6942555278512,0,1.14579102687879,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0,0,4.04770655578289,8.77854721482268,4.26834014385335,3.16038732188782,3.5634237646757,4.41224420280034,4.4449345560323,2.88449080134452,2.2464344671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| |phase1_expression=3.36312578920067,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.27564935226605,0.0992909512008853,0,0,0,0,0,0,1.14014051673824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.811015449756117,0,0,3.92445281484804,1.75748946187577,1.74986909166855,1.53985063787899,1.43752564364972,0,0,0,0,0.286533439938757,1.03134418455488,20.8385954685386,15.340738398889,12.0427966666174,0,0,0.449949858640699,0.988866362566974,0,1.49800055259202,1.92109152660777,1.03689612308478,2.56511282830212,1.68259969081106,5.99867067247988,4.41737081903227,3.55223317723367,2.58782771749238,4.5960939330501,3.30347642998166,2.68143409978894,4.76180253094355,15.0350368012421,14.1805847583735,16.1483144872596,2.79182999001381,1.68828783009504,3.81995619442025,5.59794312399969,6.12198227436143,10.4383689662168,2.49896437999507,3.17400552448499,3.76823835312181,0,0,0,0,0,0.421333260395256,0.852151612890289,0.519572009205738,0.70667914902068,4.3661460130771,0,2.54805239706646,0,0.432982082022428,1.26679932737549,1.01104889002957,0.34255163915718,0,0.890652834388949,1.38788261412909,0.608930956624282,2.53677046981664,1.80867168663147,1.99900802130698,0.502666365318702,1.23597483867187,2.31358971071859,0,1.29413479957927,0.662524555381181,0,1.86391761218122,0.292780797011547,0.41889341362691,0.766371165625774,0.11981512450592,0,0.127070227073065,3.14560342750128,0.457500602818626,1.25654352112864,0.869121600961382,0.255715457330331,2.49345653471472,0.973447578406546,2.44414473240759,0.746441823660558,0.252722758433675,1.68353484709179,4.42409506073193,9.88579049063934,10.803727788321,11.0014517020072,11.1579858608178,11.2740073850668,8.99536555773397,1.29351685369508,1.29340795759705,3.02569728268511,1.58356011747554,2.6303487891309,2.50242524303038,2.43776516565517,1.85203922767149,3.58261680273288,0,0,0,1.86413195281952,1.17263029990548,0.720248245844059,1.42046841351126,4.9191057936851,2.77680803197281,2.79040733700489,2.68273401399619,2.33530684734339,3.45575684818309,1.64167464079095,3.08061476274252,2.77779976108131,1.75640092232841,1.74468344388483,1.26173969138476,6.27718135513635,0.330418782983798,0.264450566663544,1.49301775374664,2.78684006232526,3.35055399437443,2.42020229548011,2.00140239460383,2.28270751335071,0.949058123089023,1.4822905925161,1.75934646160189,1.79060824837036,1.55971269695296,0.898819408654221,0.216138049874694,1.1948476395262,2.27601481143698,1.94222471436539,3.38123207019241,2.8511185898344,4.07300223052014,3.64706263429657,2.52946148497029,1.32849133181642,1.255989822731,0.740382983530803,0.296452627087149,0.83422552858047,0.393117990226406,0.224862112384854,0.405720242777006,0.482354319504834,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0,0,0.739012760666419,2.84237117655727,1.95557971730431,2.20668611507745,3.05097322775053,2.34508760418542,1.6663054862021,1.36593553500459,2.20689201748667,2.87904096543407,2.87018583583477,1.47476983244164,1.20879487306127,0.867894351489069,0,0,0,0.551873492609465,3.37156238974363,2.22702204525186,0.491804836130026,0.504941854408746,7.88770548540642,8.98009111882268,14.0025208526319,10.2756583119597,11.8083297263669,15.0030561318081,7.2865926301481,11.3979784585412,10.6727700045561,3.21321316421807,1.41940085208269,2.67098405500883,3.25773918707152,2.63952196756057,1.32745138339963,1.69946445308487,2.41858845571801,0.377210159511796,1.47650946440386,0.922305443831782,2.32585463851399,1.81766864738753,1.06949213515416,1.58018378967908,0,1.03135543248187,2.04263763452273,3.78128297465751,2.06973894052407,3.21505552547388,3.19212420556092,3.38900753443934,2.46823530903181,2.43571959291679,0.938686832254841,1.0591603543191,0.661585194164886,2.14352128823924,3.39075296061402,2.17126529741361,1.90995750405018,2.79039529566604,1.1659233465194,3.15223013417866,0,2.47664241555867,0.370389054739423,0.188368457004691,0,0,0.509935289981566,0.69975726161829,0.690999869022119,0.954670618015114,2.68885594543965,3.04979200690273,2.48412283890143,1.04544148007234,2.83871332870031,1.61837215661785,2.64491058321075,1.04702376793612,0.518459893167171,0.621339313086926,0,1.49516546043979,0.66183396182839,1.94451188344048,1.54991788173277,0.506868376472335,1.05621514781179,1.17183946359555,0.734015410979976,0.241584120826006,1.15212002503146,0.632022241256357,1.21635129174099,0.718976700153791,0.129920822977795,0.358053391334963,0.39736270956253,0.600977247599844,0,0.201932899896295,0.15241361331,0.504130925684203,0.194915761479505,0,0,2.72076460338254,0.887943813496259,0.0897138566094757,0.671538465456314,1.54551675225752,1.12609485270709,2.38097111547445,2.35805216986972,4.01257683228291,1.6942555278512,0,1.14579102687879,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0,0,4.04770655578289,8.77854721482268,4.26834014385335,3.16038732188782,3.5634237646757,4.41224420280034,4.4449345560323,2.88449080134452,2.2464344671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| ||
|short_description=p2@Epb4.1l4a | |short_description=p2@Epb4.1l4a | ||
}} | }} |
Latest revision as of 04:04, 27 September 2015
Short description: | p2@Epb4.1l4a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Epb4.1l4a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2806 |
Association with transcript: | -48bp_to_ENSMUST00000025234, NM_013512, uc008ejz.1_5end |
EntrezGene: | Epb4.1l4a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.20e-17 | 33 |
neuronal stem cell | 4.20e-17 | 33 |
neuroblast | 4.20e-17 | 33 |
electrically signaling cell | 4.20e-17 | 33 |
ectodermal cell | 1.52e-16 | 44 |
neurectodermal cell | 1.52e-16 | 44 |
neural cell | 5.47e-16 | 43 |
electrically responsive cell | 4.88e-12 | 39 |
electrically active cell | 4.88e-12 | 39 |
CNS neuron (sensu Vertebrata) | 1.29e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.29e-10 | 23 |
autonomic neuron | 1.89e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.60e-15 | 95 |
ectoderm | 2.60e-15 | 95 |
presumptive ectoderm | 2.60e-15 | 95 |
nervous system | 1.77e-11 | 75 |
central nervous system | 6.29e-11 | 73 |
structure with developmental contribution from neural crest | 7.13e-09 | 92 |
ecto-epithelium | 9.08e-09 | 73 |
neurectoderm | 5.12e-08 | 64 |
neural plate | 5.12e-08 | 64 |
presumptive neural plate | 5.12e-08 | 64 |
peripheral nervous system | 9.13e-08 | 11 |
embryo | 1.80e-07 | 320 |
autonomic nervous system | 1.89e-07 | 9 |