Personal tools

FFCP PHASE1:Mm9::chr18:33623661..33623718,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=27528
|EntrezGene=27528
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q07475,Q542Q5
|UniProt=Q07475,Q542Q5
|association_with_transcript=0bp_to_ENSMUST00000168890,NM_001109988,uc008eju.2_5end
|association_with_transcript=0bp_to_ENSMUST00000168890,NM_001109988,uc008eju.2_5end
|cluster_id=chr18:33623661..33623718,-
|description=CAGE_peak_3_at_D0H4S114_5end
|description=CAGE_peak_3_at_D0H4S114_5end
|id=chr18:33623661..33623718,-
|id=chr18:33623661..33623718,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!5.97e-13!333;UBERON:0000922!3.98e-10!328;UBERON:0002346!5.89e-08!71;UBERON:0003075!5.89e-08!71;UBERON:0007284!5.89e-08!71;UBERON:0000479!3.12e-07!349
|ontology_enrichment_uberon=UBERON:0000468!5.97e-13!333;UBERON:0000922!3.98e-10!328;UBERON:0002346!5.89e-08!71;UBERON:0003075!5.89e-08!71;UBERON:0007284!5.89e-08!71;UBERON:0000479!3.12e-07!349
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.96e-08,92;UBERON:0000922,2.39e-08,320;UBERON:0000479,2.40e-07,349;UBERON:0010371,2.74e-07,73;UBERON:0002346,4.76e-07,64;UBERON:0003075,4.76e-07,64;UBERON:0007284,4.76e-07,64
|phase1_expression=38.2755744580458,0.697950815278722,0.454999239389536,0.60492842261366,0,4.02910252588535,3.73780224952841,0.258246646883153,0,0,0,0,0,0.524522414513984,0,0,0,0.157731082679119,0,0,3.656861476496,0.0992909512008853,0.522399578277871,1.91990907352088,1.37645568640302,0,3.01533397311352,0.646413698057667,0.380046838912748,0.252030129759931,0.886922042621219,0,0,0,1.1554064790051,1.49611180822643,0.816677425049476,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.183546752161682,6.25913075478431,1.52617609466313,0.878744730937887,1.55543919259427,1.39986421625363,1.43752564364972,0,0,0,8.48956138918625,5.73066879877513,5.15672092277442,54.4231279712318,67.1818543675482,51.3403436840005,2.71075625655306,0,0.449949858640699,0.988866362566974,0,2.99600110518405,6.91592949578798,9.22837549545451,15.3906769698127,12.8298226424343,40.8480907697439,39.5354688303388,26.0905402327852,19.073248732629,26.6573448116906,8.8092704799511,12.3856717942632,8.44835932909339,62.1184415209213,63.7668875908795,60.9468643551409,6.14202597803038,6.75315132038016,7.33431589328689,47.7298308467342,24.6303007782448,35.0430958151565,0.302904773332736,1.66257432234928,15.3628179011889,7.74381489283248,2.03991400112325,2.15881276655127,10.3964226791627,13.8888335000174,7.44355426698285,3.06774580640504,2.59786004602869,2.47337702157238,17.8871143116384,8.98285341900225,30.5766287647975,21.3320010945999,2.38140145112336,1.01343946190039,1.51657333504435,2.8545969929765,0.517875767294343,3.56261133755579,19.0833859442749,24.9661692215956,19.1410862722529,23.6634545667617,18.2262496060342,13.3206586809456,17.7980376768749,4.04878199375753,2.65383165584962,15.8531512948461,8.61281921995535,8.24287930329878,1.86391761218122,13.1751358655196,14.0329293565015,1.27728527604296,0,0,0.127070227073065,7.33974133083631,5.03250663100489,29.2774640422974,5.04090528557602,8.43861009190091,8.3115217823824,6.65189178577806,37.5787252607667,7.0911973247753,1.76905930903572,6.52369753248069,28.3662565658694,29.1975672630511,27.1893816006077,29.5381442958002,27.4187091579851,27.288222420673,26.9860966732019,34.4075483082891,28.0238390812695,20.2343505779567,22.5217438929855,26.7418793561641,28.9169139194622,18.4573648256748,24.2822920961373,17.1169469463904,0,0,0,13.2560494422721,12.8989332989603,9.90341338035582,13.9679393995274,16.7249596985293,14.1925743856388,16.2773761325285,17.1694976895756,11.7932995790841,12.341988743511,19.3717607613332,12.6467342891535,13.0117988808546,9.22110484222413,9.66286215074677,3.57492912559016,23.5651562348561,0,0.528901133327089,18.3427895460301,13.7019636397659,12.7578786708872,8.67239155880373,8.89512175379481,9.3210556795154,1.42358718463353,11.8583247401288,13.069430857614,9.15199771389294,13.6474860983384,3.59527763461689,3.24207074812041,3.58454291857861,39.8302592001472,24.2206846732625,21.4144697778853,26.4746726198908,28.7049681008086,24.4774011417212,33.4521281387321,9.88987991463334,8.00693511991011,3.20832626196681,13.3403682189217,5.83957870006329,5.89676985339609,4.72210436008193,6.6943840058206,8.20002343158217,8.14802725700543,12.083237772934,5.5125977103512,9.60964946158285,18.6898668485561,15.2577788544086,12.793544597697,8.08252409430758,7.3552939543984,5.30687873499704,7.944387177164,19.7071068241304,20.2076570788112,20.0299201214722,22.2955735874077,29.4811013097596,37.3728516191042,26.5381761086606,23.4876364718225,24.3611158613652,26.7884011344578,17.533374674584,15.0235934223329,15.3328002096402,0,0,3.93411418415229,11.0374698521893,8.83028244932856,9.72856998715286,0.655739781506702,15.6531974866711,7.2566890465739,10.9322848403059,5.38558494331997,1.67278158566786,4.90157082981267,3.96307143104365,6.8817819284732,10.5212108848072,9.09161889277004,7.71171159412337,5.25178315270594,22.0801348547396,29.971200521058,6.10389454998381,7.96470830039777,20.6363540731734,16.0231485191318,16.4086419387631,16.5369060013233,13.5271465095328,14.9888410037568,24.3567598749929,22.4593348382374,7.26884543252377,5.27093042874994,4.12542172992747,7.83011093233712,25.0284920703521,24.0607151835923,18.6473220477485,26.4236948126988,24.6148968290857,24.517804069716,16.1366423030738,0.938686832254841,8.04961869282517,3.30792597082443,8.40919890001548,16.7923003763742,11.7610203609904,10.7435109602823,12.6388492803697,3.78925087618806,6.67531087237835,0.341741761595705,14.4470807574256,8.70414278637645,1.69531611304222,1.36694227721025,1.14389086603261,0,0.419854356970974,0.276399947608848,4.77335309007557,17.556647643753,14.84232110026,15.3367583966958,17.9815934572443,20.9628061196331,14.1607563704062,14.4643547519338,4.71160695571253,10.1099679167598,1.86401793926078,0,15.9982704267057,16.5458490457098,24.1119473546619,30.4817183407445,31.4258393412847,36.0286722642465,19.5306577265925,12.4782619866596,1.44950472495604,3.45636007509439,1.26404448251271,11.3526120562492,9.0385642305048,5.58659538804519,5.72885426135941,4.76835251475036,1.56254084375959,1.18151621739662,1.51449674922221,1.295515713135,1.41156659191577,0.877120926657772,0.577271049841977,0.701261413089414,8.84248496099324,0.665957860122194,0.269141569828427,0,3.09103350451505,4.50437941082837,6.59345847362154,6.43105137237198,2.00628841614145,23.7195773899168,22.5559365888517,23.4887160510153,20.2786755165551,15.7568979547248,9.82012066606611,10.1253375034771,9.00642406448441,10.8754178156209,10.3552062350364,30.4096928421638,16.7590446828433,19.122163844463,20.1778575166684,27.2497111416377,31.4372399449524,22.2246727801615,18.1310850370227,21.8225062522434,24.0062351175608,21.5457404906704,19.6171395041519,18.5410184790367,21.7045266652507,17.1732052177284,20.9569224164552,19.9321040625151,16.5901929598786,21.0163809409686,25.3182142631163,25.3723246765207,24.3141854438292,18.1211504359964,24.2728515775989,24.6566576688166,23.269017170211,20.4879329617505,19.4671586464004,24.580544606101,23.0068331379673,22.8965584979656,23.1485533582574,25.3723246765207,23.2405261778949,22.5700734847935,24.2316260599808,21.2877763685322,19.9830080264917,14.7292015693009,20.956184816354,16.2307484934295
|phase1_expression=38.2755744580458,0.697950815278722,0.454999239389536,0.60492842261366,0,4.02910252588535,3.73780224952841,0.258246646883153,0,0,0,0,0,0.524522414513984,0,0,0,0.157731082679119,0,0,3.656861476496,0.0992909512008853,0.522399578277871,1.91990907352088,1.37645568640302,0,3.01533397311352,0.646413698057667,0.380046838912748,0.252030129759931,0.886922042621219,0,0,0,1.1554064790051,1.49611180822643,0.816677425049476,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.183546752161682,6.25913075478431,1.52617609466313,0.878744730937887,1.55543919259427,1.39986421625363,1.43752564364972,0,0,0,8.48956138918625,5.73066879877513,5.15672092277442,54.4231279712318,67.1818543675482,51.3403436840005,2.71075625655306,0,0.449949858640699,0.988866362566974,0,2.99600110518405,6.91592949578798,9.22837549545451,15.3906769698127,12.8298226424343,40.8480907697439,39.5354688303388,26.0905402327852,19.073248732629,26.6573448116906,8.8092704799511,12.3856717942632,8.44835932909339,62.1184415209213,63.7668875908795,60.9468643551409,6.14202597803038,6.75315132038016,7.33431589328689,47.7298308467342,24.6303007782448,35.0430958151565,0.302904773332736,1.66257432234928,15.3628179011889,7.74381489283248,2.03991400112325,2.15881276655127,10.3964226791627,13.8888335000174,7.44355426698285,3.06774580640504,2.59786004602869,2.47337702157238,17.8871143116384,8.98285341900225,30.5766287647975,21.3320010945999,2.38140145112336,1.01343946190039,1.51657333504435,2.8545969929765,0.517875767294343,3.56261133755579,19.0833859442749,24.9661692215956,19.1410862722529,23.6634545667617,18.2262496060342,13.3206586809456,17.7980376768749,4.04878199375753,2.65383165584962,15.8531512948461,8.61281921995535,8.24287930329878,1.86391761218122,13.1751358655196,14.0329293565015,1.27728527604296,0,0,0.127070227073065,7.33974133083631,5.03250663100489,29.2774640422974,5.04090528557602,8.43861009190091,8.3115217823824,6.65189178577806,37.5787252607667,7.0911973247753,1.76905930903572,6.52369753248069,28.3662565658694,29.1975672630511,27.1893816006077,29.5381442958002,27.4187091579851,27.288222420673,26.9860966732019,34.4075483082891,28.0238390812695,20.2343505779567,22.5217438929855,26.7418793561641,28.9169139194622,18.4573648256748,24.2822920961373,17.1169469463904,0,0,0,13.2560494422721,12.8989332989603,9.90341338035582,13.9679393995274,16.7249596985293,14.1925743856388,16.2773761325285,17.1694976895756,11.7932995790841,12.341988743511,19.3717607613332,12.6467342891535,13.0117988808546,9.22110484222413,9.66286215074677,3.57492912559016,23.5651562348561,0,0.528901133327089,18.3427895460301,13.7019636397659,12.7578786708872,8.67239155880373,8.89512175379481,9.3210556795154,1.42358718463353,11.8583247401288,13.069430857614,9.15199771389294,13.6474860983384,3.59527763461689,3.24207074812041,3.58454291857861,39.8302592001472,24.2206846732625,21.4144697778853,26.4746726198908,28.7049681008086,24.4774011417212,33.4521281387321,9.88987991463334,8.00693511991011,3.20832626196681,13.3403682189217,5.83957870006329,5.89676985339609,4.72210436008193,6.6943840058206,8.20002343158217,8.14802725700543,12.083237772934,5.5125977103512,9.60964946158285,18.6898668485561,15.2577788544086,12.793544597697,8.08252409430758,7.3552939543984,5.30687873499704,7.944387177164,19.7071068241304,20.2076570788112,20.0299201214722,22.2955735874077,29.4811013097596,37.3728516191042,26.5381761086606,23.4876364718225,24.3611158613652,26.7884011344578,17.533374674584,15.0235934223329,15.3328002096402,0,0,3.93411418415229,11.0374698521893,8.83028244932856,9.72856998715286,0.655739781506702,15.6531974866711,7.2566890465739,10.9322848403059,5.38558494331997,1.67278158566786,4.90157082981267,3.96307143104365,6.8817819284732,10.5212108848072,9.09161889277004,7.71171159412337,5.25178315270594,22.0801348547396,29.971200521058,6.10389454998381,7.96470830039777,20.6363540731734,16.0231485191318,16.4086419387631,16.5369060013233,13.5271465095328,14.9888410037568,24.3567598749929,22.4593348382374,7.26884543252377,5.27093042874994,4.12542172992747,7.83011093233712,25.0284920703521,24.0607151835923,18.6473220477485,26.4236948126988,24.6148968290857,24.517804069716,16.1366423030738,0.938686832254841,8.04961869282517,3.30792597082443,8.40919890001548,16.7923003763742,11.7610203609904,10.7435109602823,12.6388492803697,3.78925087618806,6.67531087237835,0.341741761595705,14.4470807574256,8.70414278637645,1.69531611304222,1.36694227721025,1.14389086603261,0,0.419854356970974,0.276399947608848,4.77335309007557,17.556647643753,14.84232110026,15.3367583966958,17.9815934572443,20.9628061196331,14.1607563704062,14.4643547519338,4.71160695571253,10.1099679167598,1.86401793926078,0,15.9982704267057,16.5458490457098,24.1119473546619,30.4817183407445,31.4258393412847,36.0286722642465,19.5306577265925,12.4782619866596,1.44950472495604,3.45636007509439,1.26404448251271,11.3526120562492,9.0385642305048,5.58659538804519,5.72885426135941,4.76835251475036,1.56254084375959,1.18151621739662,1.51449674922221,1.295515713135,1.41156659191577,0.877120926657772,0.577271049841977,0.701261413089414,8.84248496099324,0.665957860122194,0.269141569828427,0,3.09103350451505,4.50437941082837,6.59345847362154,6.43105137237198,2.00628841614145,23.7195773899168,22.5559365888517,23.4887160510153,20.2786755165551,15.7568979547248,9.82012066606611,10.1253375034771,9.00642406448441,10.8754178156209,10.3552062350364,30.4096928421638,16.7590446828433,19.122163844463,20.1778575166684,27.2497111416377,31.4372399449524,22.2246727801615,18.1310850370227,21.8225062522434,24.0062351175608,21.5457404906704,19.6171395041519,18.5410184790367,21.7045266652507,17.1732052177284,20.9569224164552,19.9321040625151,16.5901929598786,21.0163809409686,25.3182142631163,25.3723246765207,24.3141854438292,18.1211504359964,24.2728515775989,24.6566576688166,23.269017170211,20.4879329617505,19.4671586464004,24.580544606101,23.0068331379673,22.8965584979656,23.1485533582574,25.3723246765207,23.2405261778949,22.5700734847935,24.2316260599808,21.2877763685322,19.9830080264917,14.7292015693009,20.956184816354,16.2307484934295
|short_description=p3@D0H4S114
|short_description=p3@D0H4S114
}}
}}

Latest revision as of 03:59, 27 September 2015

Short description:p3@D0H4S114
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_D0H4S114_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000168890, NM_001109988, uc008eju.2_5end
EntrezGene:D0H4S114
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@D0H4S114

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G738.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.49
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.73
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C354.42
Mouse Granule cells, donor2.CNhs12357.11731-123E367.18
Mouse Granule cells, donor3.CNhs12108.11636-122C751.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.23
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F515.39
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F140.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D539.54
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D226.09
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.07
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D626.66
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.39
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D462.12
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F463.77
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D860.95
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.33
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D647.73
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F624.63
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E135.04
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F91.66
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.36
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F410.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F613.89
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.89
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I830.58
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.85
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D73.56
adrenal gland, embryo E14.CNhs11038.406-44C519.08
adrenal gland, embryo E16.CNhs11004.1254-43D624.97
adrenal gland, embryo E17.CNhs11043.1263-45I119.14
adrenal gland, embryo E18.CNhs11026.1262-18F523.66
adrenal gland, neonate N00.CNhs11191.1311-23C118.23
adrenal gland, neonate N25.CNhs11223.1377-27I313.32
amnion, adult pregnant day17.5.CNhs10488.583-22A817.80
aorta, adult.CNhs10498.46-23H14.05
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F515.85
bone (os femoris), neonate N16.CNhs11225.1525-43A68.61
bone (os femoris), neonate N20.CNhs11195.1350-25C38.24
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B213.18
cerebellum, neonate N30.CNhs11135.1395-42I214.03
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A47.34
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F129.28
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F28.44
diencephalon, adult.CNhs10482.20-12F28.31
diencephalon, neonate N30.CNhs11201.1388-42B26.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B137.58
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.09
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G46.52
eyeball, embryo E12.CNhs11016.345-16C628.37
eyeball, embryo E14.CNhs10521.399-16E229.20
eyeball, embryo E15.CNhs10593.426-16C927.19
eyeball, embryo E17.CNhs11023.1261-18D429.54
eyeball, neonate N00.CNhs11207.633-15C627.42
eyeball, neonate N01.CNhs11140.1532-43E727.29
eyeball, neonate N02.CNhs11205.1551-44G826.99
eyeball, neonate N16.CNhs11188.777-19A234.41
forelimb, embryo E11.CNhs10596.335-25E228.02
forelimb, embryo E12.CNhs10600.359-14H220.23
forelimb, embryo E13.CNhs10589.384-1E222.52
forelimb, embryo E14.CNhs10577.413-26A826.74
forelimb, embryo E15.CNhs11007.437-20E728.92
forelimb, embryo E17.CNhs10598.1517-43C418.46
forelimb, embryo E18.CNhs11008.1520-43B524.28
gonad, embryo E13.CNhs11044.1564-45I617.12
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E913.26
heart, embryo E12.CNhs11015.353-12F512.90
heart, embryo E13.CNhs11013.376-3I99.90
heart, embryo E14.CNhs10597.403-26D413.97
heart, embryo E15.CNhs11017.431-16C816.72
heart, embryo E16.CNhs11021.457-17C614.19
heart, embryo E17.CNhs11025.479-18E516.28
heart, embryo E18.CNhs11030.1283-20G317.17
heart, neonate N00.CNhs11213.639-21E311.79
heart, neonate N03.CNhs11221.1349-25I212.34
heart, neonate N10.CNhs11118.749-24G119.37
heart, neonate N16.CNhs11209.782-15G112.65
heart, neonate N20.CNhs11127.821-26I613.01
heart, neonate N25.CNhs11196.1351-25D39.22
heart, neonate N30.CNhs11202.1390-42D29.66
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G123.57
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I518.34
intestine, embryo E13.CNhs11010.381-16D513.70
intestine, embryo E15.CNhs10602.976-16D812.76
intestine, embryo E16.CNhs10585.463-22H48.67
intestine, embryo E17.CNhs10582.482-18D38.90
intestine, embryo E18.CNhs10526.1289-20F79.32
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E911.86
intestine, neonate N06.CNhs11102.688-20B813.07
intestine, neonate N07.CNhs11095.720-20F29.15
intestine, neonate N10.CNhs11098.755-23A513.65
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G13.58
kidney, embryo E14.CNhs10606.411-4I939.83
kidney, embryo E15.CNhs10997.434-16F824.22
kidney, embryo E16.CNhs10584.464-22A521.41
kidney, embryo E17.CNhs11028.483-18I226.47
kidney, embryo E18.CNhs11001.1288-20C728.70
kidney, neonate N00.CNhs11214.646-21G724.48
kidney, neonate N10.CNhs11206.758-6D533.45
kidney, neonate N20.CNhs11113.832-19I19.89
kidney, neonate N25.CNhs11122.1353-25F38.01
kidney, neonate N30.CNhs11203.1385-42H13.21
liver, adult pregnant day01.CNhs10466.508-5B213.34
liver, embryo E12.CNhs10601.355-15F85.84
liver, embryo E13.CNhs10524.378-3H65.90
liver, embryo E14.CNhs10594.409-16E14.72
liver, embryo E15.CNhs10520.433-16D76.69
liver, embryo E16.CNhs10523.462-17F58.20
liver, embryo E17.CNhs10510.481-18A38.15
liver, embryo E18.CNhs10579.499-43G412.08
liver, neonate N00.CNhs11117.641-24F45.51
liver, neonate N03.CNhs11123.1345-25G29.61
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H215.26
liver, neonate N10.CNhs11115.751-24B912.79
liver, neonate N20.CNhs11220.823-25A38.08
liver, neonate N25.CNhs11198.1368-26H17.36
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B17.94
lung, embryo E12.CNhs10522.354-16G219.71
lung, embryo E14.CNhs10604.404-26F820.21
lung, embryo E15.CNhs11020.432-17C520.03
lung, embryo E16.CNhs10998.458-17B622.30
lung, embryo E17.CNhs10605.480-44A629.48
lung, embryo E18.CNhs10583.1287-20I637.37
lung, neonate N00.CNhs11224.640-42C626.54
lung, neonate N06.CNhs11212.683-20E523.49
lung, neonate N07.CNhs11111.715-19A324.36
lung, neonate N10.CNhs11219.750-23E626.79
lung, neonate N20.CNhs11109.822-18A417.53
lung, neonate N25.CNhs11119.1359-25C715.02
lung, neonate N30.CNhs11133.1394-42H215.33
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H211.04
medulla oblongata, adult.CNhs10477.17-12C28.83
medulla oblongata, neonate N30.CNhs11200.1396-42A39.73
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C215.65
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.93
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.52
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.09
olfactory brain, adult.CNhs10489.18-22I97.71
ovary, adult.CNhs10507.91-2I75.25
ovary, embryo E18.CNhs11040.505-44H722.08
ovary, neonate N00.CNhs11217.1299-22I429.97
oviduct, adult pregnant day01.CNhs10500.988-6G66.10
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F420.64
pancreas, embryo E15.CNhs11042.1556-45F216.02
pancreas, embryo E16.CNhs11003.460-26E516.41
pancreas, embryo E17.CNhs10599.1558-45G316.54
pancreas, embryo E18.CNhs10580.1535-43I713.53
pancreas, neonate N00.CNhs11105.645-26G914.99
pancreas, neonate N01.CNhs11138.1531-43D724.36
pancreas, neonate N02.CNhs11139.1539-43D822.46
pancreas, neonate N16.CNhs11136.787-43B67.27
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E625.03
pituitary gland, embryo E13.CNhs11009.370-44C724.06
pituitary gland, embryo E14.CNhs11037.398-44A518.65
pituitary gland, embryo E15.CNhs10592.427-16B926.42
pituitary gland, embryo E16.CNhs11036.449-43F624.61
pituitary gland, embryo E17.CNhs11039.1265-44F524.52
pituitary gland, neonate N00.CNhs11190.1308-22E916.14
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G38.05
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C38.41
skin, neonate N00.CNhs11124.650-25G416.79
skin, neonate N03.CNhs11215.662-22H311.76
skin, neonate N06.CNhs11097.693-20I510.74
skin, neonate N10.CNhs11108.762-6C412.64
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C96.68
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C114.45
spleen, embryo E18.CNhs11011.1271-21F28.70
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E317.56
stomach, embryo E15.CNhs10603.1252-16G814.84
stomach, embryo E16.CNhs11022.459-17D415.34
stomach, embryo E17.CNhs11006.1035-18D517.98
stomach, embryo E18.CNhs10999.1286-20C620.96
stomach, neonate N03.CNhs11193.1340-24B814.16
stomach, neonate N07.CNhs11210.718-18A914.46
stomach, neonate N25.CNhs11104.1355-25E44.71
stomach, neonate N30.CNhs11134.1386-42I110.11
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F516.00
testis, embryo E15.CNhs11034.443-27C516.55
testis, embryo E16.CNhs11033.470-26G524.11
testis, embryo E17.CNhs11029.486-18I530.48
testis, embryo E18.CNhs11027.503-18G531.43
testis, neonate N00.CNhs11189.1300-22B736.03
testis, neonate N07.CNhs11222.726-26I419.53
testis, neonate N10.CNhs11204.763-44D912.48
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I411.35
thymus, embryo E15.CNhs11005.430-45I29.04
thymus, embryo E16.CNhs11002.456-26C55.59
thymus, embryo E17.CNhs10581.478-18C15.73
thymus, embryo E18.CNhs10595.1273-19G44.77
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.51
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B48.84
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F54.50
uterus, adult.CNhs10509.92-27E56.59
vagina, adult.CNhs10502.89-27D56.43
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.72
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.56
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A323.49
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.28
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I830.41
whole body, embryo E12.CNhs10587.857-27C916.76
whole body, embryo E13.CNhs10512.372-23H219.12
whole body, embryo E14.5.CNhs10578.420-27D220.18
whole body, embryo E14.CNhs10519.395-14B127.25
whole body, embryo E16.CNhs10514.453-14F231.44
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G522.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.13
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G521.82
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G524.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G521.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.62
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.54
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G521.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.96
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.02
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G525.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G525.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G524.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G518.12
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G524.27
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G524.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G523.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G520.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G524.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G523.01
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G522.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G523.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G525.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G523.24
whole body, embryo E17.5.CNhs10513.490-9F922.57
whole body, embryo E17.CNhs10517.475-3I524.23
whole body, embryo E18.CNhs10516.493-3B321.29
whole body, neonate N00.CNhs10525.657-19C219.98
whole body, neonate N01.CNhs10576.659-23C614.73
whole body, neonate N06.CNhs10515.692-21D120.96
whole body, neonate N10.CNhs10518.761-6B416.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.96e-0892
embryo2.39e-08320
tissue2.40e-07349
ecto-epithelium2.74e-0773
neurectoderm4.76e-0764
neural plate4.76e-0764
presumptive neural plate4.76e-0764
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:33623661..33623718,-&oldid=4291506"