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FFCP PHASE1:Mm9::chr9:44096415..44096492,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=192663
|EntrezGene=192663
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=E0CYI8
|UniProt=E0CYI8
|association_with_transcript=0bp_to_ENSMUST00000161408_5end
|association_with_transcript=0bp_to_ENSMUST00000161408_5end
|cluster_id=chr9:44096415..44096492,-
|description=CAGE_peak_1_at_Abcg4_5end
|description=CAGE_peak_1_at_Abcg4_5end
|id=chr9:44096415..44096492,-
|id=chr9:44096415..44096492,-
|ontology_enrichment_celltype=CL:0000117!7.92e-13!23;CL:0000337!7.92e-13!23;CL:0000221!8.97e-12!44;CL:0000133!8.97e-12!44;CL:0002319!1.17e-11!43;CL:0000540!5.23e-10!33;CL:0000047!5.23e-10!33;CL:0000031!5.23e-10!33;CL:0000404!5.23e-10!33;CL:0000055!2.04e-08!50;CL:0000393!2.87e-07!39;CL:0000211!2.87e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,2.33e-15,23;CL:0000337,2.33e-15,23;CL:0000221,7.76e-12,44;CL:0000133,7.76e-12,44;CL:0002319,1.10e-11,43;CL:0000540,1.34e-09,33;CL:0000047,1.34e-09,33;CL:0000031,1.34e-09,33;CL:0000404,1.34e-09,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.07e-32!71;UBERON:0003075!3.07e-32!71;UBERON:0007284!3.07e-32!71;UBERON:0004121!4.15e-31!102;UBERON:0000924!4.15e-31!102;UBERON:0006601!4.15e-31!102;UBERON:0001017!7.57e-31!73;UBERON:0005743!7.57e-31!73;UBERON:0000073!2.48e-29!75;UBERON:0001016!2.48e-29!75;UBERON:0000033!9.39e-29!63;UBERON:0001049!1.36e-27!52;UBERON:0005068!1.36e-27!52;UBERON:0006241!1.36e-27!52;UBERON:0007135!1.36e-27!52;UBERON:0000955!1.34e-26!50;UBERON:0006238!1.34e-26!50;UBERON:0002616!6.24e-26!49;UBERON:0003056!4.78e-24!49;UBERON:0003080!2.11e-20!40;UBERON:0002020!8.07e-20!34;UBERON:0002780!1.22e-19!39;UBERON:0001890!1.22e-19!39;UBERON:0006240!1.22e-19!39;UBERON:0002791!5.31e-17!29;UBERON:0003528!5.31e-17!29;UBERON:0001893!5.31e-17!29;UBERON:0000956!1.06e-12!21;UBERON:0001869!1.06e-12!21;UBERON:0000203!1.06e-12!21;UBERON:0000153!3.31e-12!94;UBERON:0007811!1.65e-11!86;UBERON:0002619!5.70e-11!17;UBERON:0000025!1.31e-08!114;UBERON:0002021!6.26e-08!10;UBERON:0000411!6.26e-08!10;UBERON:0001950!6.26e-08!10;UBERON:0004111!6.85e-08!122;UBERON:0003076!1.19e-07!12;UBERON:0003057!1.19e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.10e-35,54;UBERON:0002346,3.52e-35,64;UBERON:0003075,3.52e-35,64;UBERON:0007284,3.52e-35,64;UBERON:0001017,2.69e-34,73;UBERON:0001049,1.80e-33,52;UBERON:0005068,1.80e-33,52;UBERON:0006241,1.80e-33,52;UBERON:0007135,1.80e-33,52;UBERON:0001016,1.38e-32,75;UBERON:0004121,1.49e-30,95;UBERON:0000924,1.49e-30,95;UBERON:0006601,1.49e-30,95;UBERON:0000955,9.75e-30,47;UBERON:0006238,9.75e-30,47;UBERON:0010371,2.78e-29,73;UBERON:0003056,4.06e-29,49;UBERON:0002616,6.21e-29,46;UBERON:0010314,3.03e-27,92;UBERON:0003080,1.20e-24,40;UBERON:0002020,6.25e-24,34;UBERON:0002780,1.04e-23,39;UBERON:0001890,1.04e-23,39;UBERON:0006240,1.04e-23,39;UBERON:0003528,1.79e-20,29;UBERON:0002791,1.79e-20,29;UBERON:0001893,1.79e-20,29;UBERON:0000956,3.33e-15,21;UBERON:0001869,3.33e-15,21;UBERON:0000203,3.33e-15,21;UBERON:0002619,4.39e-13,17;UBERON:0002021,2.31e-09,10;UBERON:0000411,2.31e-09,10;UBERON:0001950,2.31e-09,10;UBERON:0003076,5.05e-09,12;UBERON:0003057,5.05e-09,12;UBERON:0000025,9.56e-07,114
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.21485160433896,0.699561878128147,0,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,1.27006134691926,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0.405507724878058,0,2.34717403304412,2.39827672018491,4.17403747195497,5.05517737593137,1.67983705950435,4.31257693094915,0,0,0,0,0.573066879877513,0.515672092277442,8.9019242778223,14.2827564403449,8.23980824558033,0.338844532069132,0.889294796111139,0,0,0,3.29560121570245,9.60545763303886,3.00699875694585,6.48028503992115,3.57552434297349,12.5686433137674,12.1477697523387,4.77714116938321,5.36734637702124,4.5960939330501,13.2139057199266,17.6208526557559,15.0534402591119,9.62769900430415,12.6252948171325,9.37644067002168,18.4260779340911,11.2552522006336,11.6126668310376,11.490514833473,10.2507610175354,13.047961207771,0,0.377857800533928,0,0,0,0,0,0,0.421333260395256,0,0,0,1.54927761754349,0,0,0,0,0,0,0.45673551887624,0,4.45326417194474,1.90833859442749,2.13125834818499,1.84492397804847,3.61734337326294,2.4693628498498,1.88499886994513,0.247194967734374,0.722996784599558,0.884610551949874,0.161766849947409,0.441683036920787,0,0,15.2246014446005,18.431310199584,0.255457055208591,0,0,0,22.7681771895331,10.980014467647,6.40837195775608,18.4253779403813,15.3429274398198,18.7009240103604,16.061885043708,2.13862664085664,0.870848794270651,0,6.52369753248069,2.47228841629137,2.06911893990126,1.80062129805349,3.16480117455002,3.46986145671772,3.71529788826064,6.65282244374075,18.6266426932091,1.29340795759705,3.78212160335639,2.99116911078713,1.09597866213787,1.94633074457919,0.696504333044333,1.4404749548556,0.59710280045548,0,0,0,0.414251545071004,1.40715635988658,1.62055855314913,0.946978942340841,0.983821158737019,1.69693824176116,1.16266972375204,0.268273401399619,0.350296027101508,0,0.492502392237286,0.162137619091711,0.584799949701329,0.658650345873152,0.134206418760372,17.4540657308226,6.79170441703277,0,0,1.49301775374664,3.0190767341857,1.03093969057675,1.00841762311671,0.889512175379481,0.951128130562796,1.42358718463353,0.329397909448022,0.502670417600539,0.198956472041151,1.16978452271472,0.898819408654221,0.432276099749388,0,0.379335801906163,0.456994050438915,0,1.01825663922657,0.193952487167626,0.631222379012867,0.316182685621286,0.147610147979602,0,0,0,0.333690211432188,0.982794975566015,0.674586337154561,0.608580364165509,0.72353147925725,0,0.287696137450811,0.324270453550071,0.549122826376163,0,0,0.312037673114561,0,0,0,0.369506380333209,0.189491411770485,0.814824882210129,0.509235257325564,0.234690248288502,0.502518772325447,0.238043640886014,0.390267295715598,1.10344600874334,0.664394068946325,0.478364305972461,0,0.518054945597687,0.289298117163023,0,0,0,0.275936746304732,19.7477225684984,19.9259867206745,0,0,0.94652465824877,0,0.861693590931196,0.477937595905104,0.222798674082394,0.849229592366497,1.21443210502468,1.16902343164525,0.790575555893047,14.4594592389813,1.27746076687442,1.95872164033981,1.95464351224291,2.3095817216155,0,0.485561272309963,0.604647113929502,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,2.04263763452273,1.98067203434441,1.94038025674132,1.28602221018955,1.77340233642274,3.38900753443934,2.46823530903181,2.13125464380219,0,0,0,0.49465875882444,0.645857706783622,0.422190474497091,0.596861720015682,0,0.291480836629851,13.1651964427462,0.170870880797853,0.619160603889667,0.370389054739423,0.941842285023455,0.683471138605126,0.228778173206523,0,0,0,0,1.42351197111511,1.01659733563424,0.756037385752609,1.25452977608681,0.87345025498471,0.809186078308924,1.07449492442937,0,0.648074866458964,0,0,1.64468200648377,1.82004339502807,2.33341426012857,2.19571699912143,2.36538575687089,1.40828686374905,1.0416350787516,0.629156066554265,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0.226730383615211,0,0,0,1.15913756419314,0.187682475451182,0.73260649706906,0.214368379079066,0.501572104035363,20.8958181768315,19.7939851698086,24.6345070778941,15.8104927756193,15.7568979547248,20.3956352295219,16.2005400055633,16.2115633160719,13.1411298605419,18.1216109113137,0.726511433089237,3.99024873401031,3.07320490357441,2.18796045361465,1.67690530102386,0.735374033800057,1.77797382241292,1.03017528619447,3.20919209591815,2.27427490587418,2.02783439912192,3.39527414494937,2.24739617927718,2.17685518176556,1.43588672389033,0.476293691283074,2.0859178670074,3.6652751888104,1.64834360321323,2.35518272215036,3.08582327146874,1.77475806159337,0.953744759789284,1.45346416632329,1.41164070622996,1.18460451048347,0.182927972872773,2.10455769150274,1.49384525230448,2.24456908663095,2.60997039873183,2.06859412988683,1.63692417267876,1.39443157067369,0.578719832943424,6.99469618226249,2.33931608445408,1.71896843238639,2.29545998482612,0.661774257358546,0.463735671240843
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.21485160433896,0.699561878128147,0,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,1.27006134691926,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0.405507724878058,0,2.34717403304412,2.39827672018491,4.17403747195497,5.05517737593137,1.67983705950435,4.31257693094915,0,0,0,0,0.573066879877513,0.515672092277442,8.9019242778223,14.2827564403449,8.23980824558033,0.338844532069132,0.889294796111139,0,0,0,3.29560121570245,9.60545763303886,3.00699875694585,6.48028503992115,3.57552434297349,12.5686433137674,12.1477697523387,4.77714116938321,5.36734637702124,4.5960939330501,13.2139057199266,17.6208526557559,15.0534402591119,9.62769900430415,12.6252948171325,9.37644067002168,18.4260779340911,11.2552522006336,11.6126668310376,11.490514833473,10.2507610175354,13.047961207771,0,0.377857800533928,0,0,0,0,0,0,0.421333260395256,0,0,0,1.54927761754349,0,0,0,0,0,0,0.45673551887624,0,4.45326417194474,1.90833859442749,2.13125834818499,1.84492397804847,3.61734337326294,2.4693628498498,1.88499886994513,0.247194967734374,0.722996784599558,0.884610551949874,0.161766849947409,0.441683036920787,0,0,15.2246014446005,18.431310199584,0.255457055208591,0,0,0,22.7681771895331,10.980014467647,6.40837195775608,18.4253779403813,15.3429274398198,18.7009240103604,16.061885043708,2.13862664085664,0.870848794270651,0,6.52369753248069,2.47228841629137,2.06911893990126,1.80062129805349,3.16480117455002,3.46986145671772,3.71529788826064,6.65282244374075,18.6266426932091,1.29340795759705,3.78212160335639,2.99116911078713,1.09597866213787,1.94633074457919,0.696504333044333,1.4404749548556,0.59710280045548,0,0,0,0.414251545071004,1.40715635988658,1.62055855314913,0.946978942340841,0.983821158737019,1.69693824176116,1.16266972375204,0.268273401399619,0.350296027101508,0,0.492502392237286,0.162137619091711,0.584799949701329,0.658650345873152,0.134206418760372,17.4540657308226,6.79170441703277,0,0,1.49301775374664,3.0190767341857,1.03093969057675,1.00841762311671,0.889512175379481,0.951128130562796,1.42358718463353,0.329397909448022,0.502670417600539,0.198956472041151,1.16978452271472,0.898819408654221,0.432276099749388,0,0.379335801906163,0.456994050438915,0,1.01825663922657,0.193952487167626,0.631222379012867,0.316182685621286,0.147610147979602,0,0,0,0.333690211432188,0.982794975566015,0.674586337154561,0.608580364165509,0.72353147925725,0,0.287696137450811,0.324270453550071,0.549122826376163,0,0,0.312037673114561,0,0,0,0.369506380333209,0.189491411770485,0.814824882210129,0.509235257325564,0.234690248288502,0.502518772325447,0.238043640886014,0.390267295715598,1.10344600874334,0.664394068946325,0.478364305972461,0,0.518054945597687,0.289298117163023,0,0,0,0.275936746304732,19.7477225684984,19.9259867206745,0,0,0.94652465824877,0,0.861693590931196,0.477937595905104,0.222798674082394,0.849229592366497,1.21443210502468,1.16902343164525,0.790575555893047,14.4594592389813,1.27746076687442,1.95872164033981,1.95464351224291,2.3095817216155,0,0.485561272309963,0.604647113929502,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,2.04263763452273,1.98067203434441,1.94038025674132,1.28602221018955,1.77340233642274,3.38900753443934,2.46823530903181,2.13125464380219,0,0,0,0.49465875882444,0.645857706783622,0.422190474497091,0.596861720015682,0,0.291480836629851,13.1651964427462,0.170870880797853,0.619160603889667,0.370389054739423,0.941842285023455,0.683471138605126,0.228778173206523,0,0,0,0,1.42351197111511,1.01659733563424,0.756037385752609,1.25452977608681,0.87345025498471,0.809186078308924,1.07449492442937,0,0.648074866458964,0,0,1.64468200648377,1.82004339502807,2.33341426012857,2.19571699912143,2.36538575687089,1.40828686374905,1.0416350787516,0.629156066554265,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0.226730383615211,0,0,0,1.15913756419314,0.187682475451182,0.73260649706906,0.214368379079066,0.501572104035363,20.8958181768315,19.7939851698086,24.6345070778941,15.8104927756193,15.7568979547248,20.3956352295219,16.2005400055633,16.2115633160719,13.1411298605419,18.1216109113137,0.726511433089237,3.99024873401031,3.07320490357441,2.18796045361465,1.67690530102386,0.735374033800057,1.77797382241292,1.03017528619447,3.20919209591815,2.27427490587418,2.02783439912192,3.39527414494937,2.24739617927718,2.17685518176556,1.43588672389033,0.476293691283074,2.0859178670074,3.6652751888104,1.64834360321323,2.35518272215036,3.08582327146874,1.77475806159337,0.953744759789284,1.45346416632329,1.41164070622996,1.18460451048347,0.182927972872773,2.10455769150274,1.49384525230448,2.24456908663095,2.60997039873183,2.06859412988683,1.63692417267876,1.39443157067369,0.578719832943424,6.99469618226249,2.33931608445408,1.71896843238639,2.29545998482612,0.661774257358546,0.463735671240843
|short_description=p1@Abcg4
|short_description=p1@Abcg4
}}
}}

Latest revision as of 16:44, 26 September 2015

Short description:p1@Abcg4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Abcg4_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000161408_5end
EntrezGene:Abcg4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Abcg4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.06
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C38.90
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E89.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.48
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.15
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.37
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.63
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.63
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.43
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.49
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D74.45
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F53.62
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B215.22
cerebellum, neonate N30.CNhs11135.1395-42I218.43
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A422.77
corpus striatum, adult.CNhs10487.19-21D810.98
corpus striatum, neonate N00.CNhs11226.630-43F16.41
cortex, adult.CNhs10473.12-14D518.43
cortex, neonate N30.CNhs11107.1392-42F215.34
diencephalon, adult.CNhs10482.20-12F218.70
diencephalon, neonate N30.CNhs11201.1388-42B216.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G46.52
eyeball, embryo E12.CNhs11016.345-16C62.47
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C63.47
eyeball, neonate N01.CNhs11140.1532-43E73.72
eyeball, neonate N02.CNhs11205.1551-44G86.65
eyeball, neonate N16.CNhs11188.777-19A218.63
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E817.45
hippocampus, neonate N00.CNhs11228.627-43G16.79
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C219.75
medulla oblongata, neonate N30.CNhs11200.1396-42A319.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I914.46
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C913.17
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.90
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.79
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A324.63
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A520.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.12
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I56.99
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.33e-1523
neuroblast (sensu Vertebrata)2.33e-1523
ectodermal cell7.76e-1244
neurectodermal cell7.76e-1244
neural cell1.10e-1143
neuron1.34e-0933
neuronal stem cell1.34e-0933
neuroblast1.34e-0933
electrically signaling cell1.34e-0933

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.10e-3554
neurectoderm3.52e-3564
neural plate3.52e-3564
presumptive neural plate3.52e-3564
central nervous system2.69e-3473
neural tube1.80e-3352
neural rod1.80e-3352
future spinal cord1.80e-3352
neural keel1.80e-3352
nervous system1.38e-3275
ectoderm-derived structure1.49e-3095
ectoderm1.49e-3095
presumptive ectoderm1.49e-3095
brain9.75e-3047
future brain9.75e-3047
ecto-epithelium2.78e-2973
pre-chordal neural plate4.06e-2949
regional part of brain6.21e-2946
structure with developmental contribution from neural crest3.03e-2792
anterior neural tube1.20e-2440
gray matter6.25e-2434
regional part of forebrain1.04e-2339
forebrain1.04e-2339
future forebrain1.04e-2339
brain grey matter1.79e-2029
regional part of telencephalon1.79e-2029
telencephalon1.79e-2029
cerebral cortex3.33e-1521
cerebral hemisphere3.33e-1521
pallium3.33e-1521
regional part of cerebral cortex4.39e-1317
occipital lobe2.31e-0910
visual cortex2.31e-0910
neocortex2.31e-0910
posterior neural tube5.05e-0912
chordal neural plate5.05e-0912
tube9.56e-07114
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