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FFCP PHASE1:Mm9::chr9:42914037..42914109,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=69632
|EntrezGene=69632
|HGNC=
|HGNC=
|MCL_coexpression_id=1747
|TSSclassifier=NA
|UniProt=F8VQN6,Q8R4H2,Q9D7D6
|UniProt=F8VQN6,Q8R4H2,Q9D7D6
|association_with_transcript=-236bp_to_ENSMUST00000165665,NM_027144,uc009pba.1,uc009pbb.1,uc009pbc.1_5end
|association_with_transcript=-236bp_to_ENSMUST00000165665,NM_027144,uc009pba.1,uc009pbb.1,uc009pbc.1_5end
|cluster_id=chr9:42914037..42914109,-
|description=CAGE_peak_1_at_Arhgef12_5end
|description=CAGE_peak_1_at_Arhgef12_5end
|id=chr9:42914037..42914109,-
|id=chr9:42914037..42914109,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!2.03e-18!122;UBERON:0000025!2.11e-17!114;UBERON:0000468!1.76e-09!333;UBERON:0004121!4.33e-09!102;UBERON:0000924!4.33e-09!102;UBERON:0006601!4.33e-09!102;UBERON:0000477!1.13e-08!154;UBERON:0009569!1.37e-08!66;UBERON:0000073!2.91e-08!75;UBERON:0001016!2.91e-08!75;UBERON:0001017!7.52e-08!73;UBERON:0005743!7.52e-08!73;UBERON:0000475!1.49e-07!200;UBERON:0005177!2.91e-07!85;UBERON:0002100!6.29e-07!98;UBERON:0003103!6.45e-07!43;UBERON:0000479!6.58e-07!349;UBERON:0000922!8.14e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.02e-18,122;UBERON:0000025,2.10e-17,114;UBERON:0010314,1.71e-10,92;UBERON:0009569,1.37e-08,66;UBERON:0004121,2.71e-08,95;UBERON:0000924,2.71e-08,95;UBERON:0006601,2.71e-08,95;UBERON:0001016,2.90e-08,75;UBERON:0001017,7.50e-08,73;UBERON:0000922,5.82e-07,320;UBERON:0003103,6.43e-07,43;UBERON:0000479,7.78e-07,349
|phase1_expression=17.4562243344225,2.09385244583617,2.72999543633722,3.0246421130683,3.50627010962443,4.53274034162102,4.67225281191051,4.13194635013044,0.422366166455,1.40438715793196,1.19852577757853,1.03703806693937,0.684802919724823,0.961624426608971,10.3264026162855,17.0079224607454,32.1798463938947,1.57731082679119,2.87940310572051,4.2438965179803,26.7035931074359,0,0,1.27993938234725,1.37645568640302,2.8711598205751,1.29228598847722,3.01659725760245,1.52018735565099,1.76421090831952,2.88249663851896,10.1604907753541,13.5314253268605,0,5.77703239502549,3.82339684324532,3.26670970019791,0.418531630736908,0,0,0,0,0,12.211991343631,13.1790010585369,12.2976323948327,10.9534788208725,12.6454590700659,12.3024262331304,21.1928589990969,11.4788865732797,17.2503077237966,0.503347818173209,0.725362142011344,1.34437519656986,20.0662360108039,14.6132054368766,22.6895720602075,10.7227724255587,10.5798195854407,7.60597684207415,5.08266798103698,7.11435836888911,2.2497492932035,1.97773272513395,0,13.4820049733282,13.831858991576,9.43575472007147,6.61529097825284,6.30974884054146,15.7108041422092,15.6816664075646,5.02212276781312,5.94241920313065,4.5960939330501,44.0463523997555,41.8814468919416,39.3232725135983,6.85808696197008,6.12967212136145,4.16730696445408,32.6644108831616,37.7050948721226,38.8107549353098,17.0884579574727,20.3591503542717,13.7935589910722,15.9782267933018,20.7066074692592,49.8566920566886,30.1148356943485,21.759082678648,16.1910957491345,14.9448576012964,20.6092368064774,14.3253308534387,6.98764322570037,6.49465011507172,6.36011234118612,19.7180787687353,12.8326477414318,22.9324715735981,14.2213340630666,4.32982082022428,3.80039798212648,5.05524445014783,14.9580882431969,4.91981978929626,30.1337542301594,9.71517829890361,11.5696881758614,12.9144678463393,15.3737093363675,20.1076689202055,23.7509857613087,6.67426412882809,26.7508810301837,11.4999371753484,13.2648816956876,14.575540218386,12.1218813283806,7.45567044872489,37.7687228144896,46.0782754989601,3.57639877292028,0.479260498023681,0,0.254140454146129,41.1924258363262,32.9400434029411,7.03664371832041,37.5460531615317,35.8001640262463,39.8953045554355,31.3125637720772,17.5163705822544,16.7949410323626,11.8779696463827,16.2040229032585,13.4024056251585,8.04657365517155,11.7040384373477,11.6042709733501,14.7639203158381,11.4021211053516,12.5560310910037,26.1290404446406,6.89817577385095,8.13156144721623,9.85326295318113,6.57587197282724,14.4584569597311,16.716103993064,17.9030458674911,10.3497818745616,0,0,0,11.1847917169171,8.91199027928165,9.18316513451176,14.2046841351126,15.7411385397923,16.9693824176116,19.9979192485351,20.6570519077707,25.8051406631445,26.4941358360704,32.9976602798981,47.3441847747797,47.8073958880837,42.1536221358817,50.193200616379,32.8052319760039,13.4805042216863,2.64335026387038,5.28901133327089,7.46508876873319,7.43157349953403,7.47431275668141,6.05050573870028,7.11609740303585,7.03834816616469,7.59246498471219,5.76446341534038,8.79673230800943,7.75930240960488,8.96834800747953,8.08937467788799,6.91641759599022,6.96994456390285,9.67306294860717,12.224590849241,19.1603150644237,19.3468761453049,18.6194387680921,22.0927832654503,24.8519590898331,24.3556744166344,21.9798218977925,23.9390498008293,22.5303996586233,7.34118465150814,8.64859578498093,8.31989815823959,9.33156558387113,11.576503668116,11.9674150337267,13.8094145976389,19.6183624397793,7.96228098245436,21.5652309791032,21.2120340171047,14.0416952901552,22.2269412593458,13.8136008411872,25.0870631108951,49.8833613449833,8.33762211790133,13.2001630918041,12.7308814331391,15.7242466353296,20.6032696653433,37.3728516191042,37.6607940365552,46.8176377995387,42.5212204125648,55.649714261463,50.3060376177316,53.5323443784276,51.4950648550181,0,0.54390568381871,2.45882136509518,8.82997588175144,39.6559957269846,39.9691851279413,4.75411341592359,19.9452032491455,12.9358369960665,10.9322848403059,14.8642144435631,17.4447222505363,18.7150886229211,27.1753469557279,16.5972387686707,16.9508397588561,18.9738133414331,35.9879874392424,27.2524963599876,11.5742642383716,19.3835481630756,29.0347416431662,9.2921596837974,6.06951590387454,4.83717691143602,5.46954731292105,4.42952839321159,8.60818414242997,15.7641258832615,11.2695456138027,13.5469003786194,10.4292130118819,5.27093042874994,6.18813259489121,14.9793426531667,8.46287141947158,6.98536892426874,9.64516657642165,8.86701168211368,11.4156043265325,12.6702745863633,8.52501857520878,11.4989136951218,15.4637411730589,13.0111754852428,19.1268053412117,20.8289110437718,13.0275917844817,15.2796600324015,15.2651036762907,7.28702091574627,46.1709002006169,17.9414424837745,14.2406938894624,11.8524497516615,19.2135826144785,16.129918871081,14.870581258424,2.88963330989554,2.79902904647316,2.48759952847963,6.68269432610579,7.90839983952838,10.775931757723,10.4765180597147,10.6635030967379,13.3201163885168,15.1048067950999,17.5225326137712,11.2555055053133,6.73997861117323,6.21339313086926,11.2738587736838,9.56905894681464,10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|phase1_expression=17.4562243344225,2.09385244583617,2.72999543633722,3.0246421130683,3.50627010962443,4.53274034162102,4.67225281191051,4.13194635013044,0.422366166455,1.40438715793196,1.19852577757853,1.03703806693937,0.684802919724823,0.961624426608971,10.3264026162855,17.0079224607454,32.1798463938947,1.57731082679119,2.87940310572051,4.2438965179803,26.7035931074359,0,0,1.27993938234725,1.37645568640302,2.8711598205751,1.29228598847722,3.01659725760245,1.52018735565099,1.76421090831952,2.88249663851896,10.1604907753541,13.5314253268605,0,5.77703239502549,3.82339684324532,3.26670970019791,0.418531630736908,0,0,0,0,0,12.211991343631,13.1790010585369,12.2976323948327,10.9534788208725,12.6454590700659,12.3024262331304,21.1928589990969,11.4788865732797,17.2503077237966,0.503347818173209,0.725362142011344,1.34437519656986,20.0662360108039,14.6132054368766,22.6895720602075,10.7227724255587,10.5798195854407,7.60597684207415,5.08266798103698,7.11435836888911,2.2497492932035,1.97773272513395,0,13.4820049733282,13.831858991576,9.43575472007147,6.61529097825284,6.30974884054146,15.7108041422092,15.6816664075646,5.02212276781312,5.94241920313065,4.5960939330501,44.0463523997555,41.8814468919416,39.3232725135983,6.85808696197008,6.12967212136145,4.16730696445408,32.6644108831616,37.7050948721226,38.8107549353098,17.0884579574727,20.3591503542717,13.7935589910722,15.9782267933018,20.7066074692592,49.8566920566886,30.1148356943485,21.759082678648,16.1910957491345,14.9448576012964,20.6092368064774,14.3253308534387,6.98764322570037,6.49465011507172,6.36011234118612,19.7180787687353,12.8326477414318,22.9324715735981,14.2213340630666,4.32982082022428,3.80039798212648,5.05524445014783,14.9580882431969,4.91981978929626,30.1337542301594,9.71517829890361,11.5696881758614,12.9144678463393,15.3737093363675,20.1076689202055,23.7509857613087,6.67426412882809,26.7508810301837,11.4999371753484,13.2648816956876,14.575540218386,12.1218813283806,7.45567044872489,37.7687228144896,46.0782754989601,3.57639877292028,0.479260498023681,0,0.254140454146129,41.1924258363262,32.9400434029411,7.03664371832041,37.5460531615317,35.8001640262463,39.8953045554355,31.3125637720772,17.5163705822544,16.7949410323626,11.8779696463827,16.2040229032585,13.4024056251585,8.04657365517155,11.7040384373477,11.6042709733501,14.7639203158381,11.4021211053516,12.5560310910037,26.1290404446406,6.89817577385095,8.13156144721623,9.85326295318113,6.57587197282724,14.4584569597311,16.716103993064,17.9030458674911,10.3497818745616,0,0,0,11.1847917169171,8.91199027928165,9.18316513451176,14.2046841351126,15.7411385397923,16.9693824176116,19.9979192485351,20.6570519077707,25.8051406631445,26.4941358360704,32.9976602798981,47.3441847747797,47.8073958880837,42.1536221358817,50.193200616379,32.8052319760039,13.4805042216863,2.64335026387038,5.28901133327089,7.46508876873319,7.43157349953403,7.47431275668141,6.05050573870028,7.11609740303585,7.03834816616469,7.59246498471219,5.76446341534038,8.79673230800943,7.75930240960488,8.96834800747953,8.08937467788799,6.91641759599022,6.96994456390285,9.67306294860717,12.224590849241,19.1603150644237,19.3468761453049,18.6194387680921,22.0927832654503,24.8519590898331,24.3556744166344,21.9798218977925,23.9390498008293,22.5303996586233,7.34118465150814,8.64859578498093,8.31989815823959,9.33156558387113,11.576503668116,11.9674150337267,13.8094145976389,19.6183624397793,7.96228098245436,21.5652309791032,21.2120340171047,14.0416952901552,22.2269412593458,13.8136008411872,25.0870631108951,49.8833613449833,8.33762211790133,13.2001630918041,12.7308814331391,15.7242466353296,20.6032696653433,37.3728516191042,37.6607940365552,46.8176377995387,42.5212204125648,55.649714261463,50.3060376177316,53.5323443784276,51.4950648550181,0,0.54390568381871,2.45882136509518,8.82997588175144,39.6559957269846,39.9691851279413,4.75411341592359,19.9452032491455,12.9358369960665,10.9322848403059,14.8642144435631,17.4447222505363,18.7150886229211,27.1753469557279,16.5972387686707,16.9508397588561,18.9738133414331,35.9879874392424,27.2524963599876,11.5742642383716,19.3835481630756,29.0347416431662,9.2921596837974,6.06951590387454,4.83717691143602,5.46954731292105,4.42952839321159,8.60818414242997,15.7641258832615,11.2695456138027,13.5469003786194,10.4292130118819,5.27093042874994,6.18813259489121,14.9793426531667,8.46287141947158,6.98536892426874,9.64516657642165,8.86701168211368,11.4156043265325,12.6702745863633,8.52501857520878,11.4989136951218,15.4637411730589,13.0111754852428,19.1268053412117,20.8289110437718,13.0275917844817,15.2796600324015,15.2651036762907,7.28702091574627,46.1709002006169,17.9414424837745,14.2406938894624,11.8524497516615,19.2135826144785,16.129918871081,14.870581258424,2.88963330989554,2.79902904647316,2.48759952847963,6.68269432610579,7.90839983952838,10.775931757723,10.4765180597147,10.6635030967379,13.3201163885168,15.1048067950999,17.5225326137712,11.2555055053133,6.73997861117323,6.21339313086926,11.2738587736838,9.56905894681464,10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|short_description=p1@Arhgef12
|short_description=p1@Arhgef12
}}
}}

Latest revision as of 16:12, 26 September 2015

Short description:p1@Arhgef12
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Arhgef12_5end
Coexpression cluster:MCL_coexpression_mm9:1747
Association with transcript: -236bp_to_ENSMUST00000165665, NM_027144, uc009pba.1, uc009pbb.1, uc009pbc.1_5end
EntrezGene:Arhgef12
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Arhgef12

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.46
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.67
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.04
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A317.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A532.18
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A326.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I23.02
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G613.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.78
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D812.21
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D913.18
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C212.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.48
Mouse Astrocytes, donor3.CNhs12107.11633-122C417.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C120.07
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.61
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C522.69
Mouse Granule cells, donor1.CNhs12131.11713-123C310.72
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C813.48
Mouse Microglia, donor2.CNhs12634.11736-123E813.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.44
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.68
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.02
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.94
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D344.05
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F341.88
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D739.32
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.86
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.13
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E432.66
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E537.71
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I638.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.09
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.36
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.79
Mouse Schwann, donor1.CNhs12507.11728-123D915.98
Mouse Schwann, donor2.CNhs12573.11746-123F920.71
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G349.86
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F730.11
Mouse hepatocyte, donor1.CNhs13078.11714-123C421.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C816.19
Mouse hepatocyte, donor6.CNhs13090.11822-124F414.94
Mouse hepatocyte, donor8.CNhs13091.11824-124F620.61
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A714.33
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.36
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.72
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B614.96
accessory axillary lymph node, adult.CNhs10475.1063-29H94.92
adrenal gland, adult.CNhs10508.49-24D730.13
adrenal gland, embryo E14.CNhs11038.406-44C59.72
adrenal gland, embryo E16.CNhs11004.1254-43D611.57
adrenal gland, embryo E17.CNhs11043.1263-45I112.91
adrenal gland, embryo E18.CNhs11026.1262-18F515.37
adrenal gland, neonate N00.CNhs11191.1311-23C120.11
adrenal gland, neonate N25.CNhs11223.1377-27I323.75
amnion, adult pregnant day17.5.CNhs10488.583-22A86.67
aorta, adult.CNhs10498.46-23H126.75
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F513.26
bone (os femoris), neonate N16.CNhs11225.1525-43A614.58
bone (os femoris), neonate N20.CNhs11195.1350-25C312.12
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B237.77
cerebellum, neonate N30.CNhs11135.1395-42I246.08
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A441.19
corpus striatum, adult.CNhs10487.19-21D832.94
corpus striatum, neonate N00.CNhs11226.630-43F17.04
cortex, adult.CNhs10473.12-14D537.55
cortex, neonate N30.CNhs11107.1392-42F235.80
diencephalon, adult.CNhs10482.20-12F239.90
diencephalon, neonate N30.CNhs11201.1388-42B231.31
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B117.52
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.79
epididymis, adult.CNhs10490.58-23B211.88
eyeball, adult.CNhs10484.31-12G416.20
eyeball, embryo E12.CNhs11016.345-16C613.40
eyeball, embryo E14.CNhs10521.399-16E28.05
eyeball, embryo E15.CNhs10593.426-16C911.70
eyeball, embryo E17.CNhs11023.1261-18D411.60
eyeball, neonate N00.CNhs11207.633-15C614.76
eyeball, neonate N01.CNhs11140.1532-43E711.40
eyeball, neonate N02.CNhs11205.1551-44G812.56
eyeball, neonate N16.CNhs11188.777-19A226.13
forelimb, embryo E11.CNhs10596.335-25E26.90
forelimb, embryo E12.CNhs10600.359-14H28.13
forelimb, embryo E13.CNhs10589.384-1E29.85
forelimb, embryo E14.CNhs10577.413-26A86.58
forelimb, embryo E15.CNhs11007.437-20E714.46
forelimb, embryo E17.CNhs10598.1517-43C416.72
forelimb, embryo E18.CNhs11008.1520-43B517.90
gonad, embryo E13.CNhs11044.1564-45I610.35
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E911.18
heart, embryo E12.CNhs11015.353-12F58.91
heart, embryo E13.CNhs11013.376-3I99.18
heart, embryo E14.CNhs10597.403-26D414.20
heart, embryo E15.CNhs11017.431-16C815.74
heart, embryo E16.CNhs11021.457-17C616.97
heart, embryo E17.CNhs11025.479-18E520.00
heart, embryo E18.CNhs11030.1283-20G320.66
heart, neonate N00.CNhs11213.639-21E325.81
heart, neonate N03.CNhs11221.1349-25I226.49
heart, neonate N10.CNhs11118.749-24G133.00
heart, neonate N16.CNhs11209.782-15G147.34
heart, neonate N20.CNhs11127.821-26I647.81
heart, neonate N25.CNhs11196.1351-25D342.15
heart, neonate N30.CNhs11202.1390-42D250.19
hippocampus, adult.CNhs10478.13-16E832.81
hippocampus, neonate N00.CNhs11228.627-43G113.48
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A35.29
intestine, embryo E12.CNhs11019.1251-16I57.47
intestine, embryo E13.CNhs11010.381-16D57.43
intestine, embryo E15.CNhs10602.976-16D87.47
intestine, embryo E16.CNhs10585.463-22H46.05
intestine, embryo E17.CNhs10582.482-18D37.12
intestine, embryo E18.CNhs10526.1289-20F77.04
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E95.76
intestine, neonate N06.CNhs11102.688-20B88.80
intestine, neonate N07.CNhs11095.720-20F27.76
intestine, neonate N10.CNhs11098.755-23A58.97
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E36.92
intestine, neonate N30.CNhs11131.1384-42G16.97
kidney, embryo E14.CNhs10606.411-4I99.67
kidney, embryo E15.CNhs10997.434-16F812.22
kidney, embryo E16.CNhs10584.464-22A519.16
kidney, embryo E17.CNhs11028.483-18I219.35
kidney, embryo E18.CNhs11001.1288-20C718.62
kidney, neonate N00.CNhs11214.646-21G722.09
kidney, neonate N10.CNhs11206.758-6D524.85
kidney, neonate N20.CNhs11113.832-19I124.36
kidney, neonate N25.CNhs11122.1353-25F321.98
kidney, neonate N30.CNhs11203.1385-42H123.94
liver, adult pregnant day01.CNhs10466.508-5B222.53
liver, embryo E12.CNhs10601.355-15F87.34
liver, embryo E13.CNhs10524.378-3H68.65
liver, embryo E14.CNhs10594.409-16E18.32
liver, embryo E15.CNhs10520.433-16D79.33
liver, embryo E16.CNhs10523.462-17F511.58
liver, embryo E17.CNhs10510.481-18A311.97
liver, embryo E18.CNhs10579.499-43G413.81
liver, neonate N00.CNhs11117.641-24F419.62
liver, neonate N03.CNhs11123.1345-25G27.96
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H221.21
liver, neonate N10.CNhs11115.751-24B914.04
liver, neonate N20.CNhs11220.823-25A322.23
liver, neonate N25.CNhs11198.1368-26H113.81
liver, neonate N30.CNhs11106.1382-42D125.09
lung, adult.CNhs10474.28-22B149.88
lung, embryo E12.CNhs10522.354-16G28.34
lung, embryo E14.CNhs10604.404-26F813.20
lung, embryo E15.CNhs11020.432-17C512.73
lung, embryo E16.CNhs10998.458-17B615.72
lung, embryo E17.CNhs10605.480-44A620.60
lung, embryo E18.CNhs10583.1287-20I637.37
lung, neonate N00.CNhs11224.640-42C637.66
lung, neonate N06.CNhs11212.683-20E546.82
lung, neonate N07.CNhs11111.715-19A342.52
lung, neonate N10.CNhs11219.750-23E655.65
lung, neonate N20.CNhs11109.822-18A450.31
lung, neonate N25.CNhs11119.1359-25C753.53
lung, neonate N30.CNhs11133.1394-42H251.50
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H28.83
medulla oblongata, adult.CNhs10477.17-12C239.66
medulla oblongata, neonate N30.CNhs11200.1396-42A339.97
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.75
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C219.95
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.93
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D717.44
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D818.72
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D927.18
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D416.60
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.95
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.97
olfactory brain, adult.CNhs10489.18-22I935.99
ovary, adult.CNhs10507.91-2I727.25
ovary, embryo E18.CNhs11040.505-44H711.57
ovary, neonate N00.CNhs11217.1299-22I419.38
oviduct, adult pregnant day01.CNhs10500.988-6G629.03
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F46.07
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E55.47
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I78.61
pancreas, neonate N00.CNhs11105.645-26G915.76
pancreas, neonate N01.CNhs11138.1531-43D711.27
pancreas, neonate N02.CNhs11139.1539-43D813.55
pancreas, neonate N16.CNhs11136.787-43B610.43
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G814.98
pituitary gland, embryo E12.CNhs11018.346-16E68.46
pituitary gland, embryo E13.CNhs11009.370-44C76.99
pituitary gland, embryo E14.CNhs11037.398-44A59.65
pituitary gland, embryo E15.CNhs10592.427-16B98.87
pituitary gland, embryo E16.CNhs11036.449-43F611.42
pituitary gland, embryo E17.CNhs11039.1265-44F512.67
pituitary gland, neonate N00.CNhs11190.1308-22E98.53
placenta, adult pregnant day10.CNhs10472.539-13I711.50
placenta, adult pregnant day17.CNhs10464.577-18G315.46
prostate, adult.CNhs10470.859-1F813.01
skin, adult.CNhs10492.30-1C319.13
skin, neonate N00.CNhs11124.650-25G420.83
skin, neonate N03.CNhs11215.662-22H313.03
skin, neonate N06.CNhs11097.693-20I515.28
skin, neonate N10.CNhs11108.762-6C415.27
small intestine, neonate N16.CNhs11114.790-21I17.29
spinal cord, adult.CNhs10505.24-13C946.17
spleen, adult.CNhs10465.25-2G217.94
spleen, embryo E16.CNhs11035.461-43C114.24
spleen, embryo E18.CNhs11011.1271-21F211.85
spleen, neonate N10.CNhs11116.752-24D119.21
spleen, neonate N20.CNhs11112.824-19H116.13
spleen, neonate N25.CNhs11099.1354-25G314.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.49
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E37.91
stomach, embryo E15.CNhs10603.1252-16G810.78
stomach, embryo E16.CNhs11022.459-17D410.48
stomach, embryo E17.CNhs11006.1035-18D510.66
stomach, embryo E18.CNhs10999.1286-20C613.32
stomach, neonate N03.CNhs11193.1340-24B815.10
stomach, neonate N07.CNhs11210.718-18A917.52
stomach, neonate N25.CNhs11104.1355-25E411.26
stomach, neonate N30.CNhs11134.1386-42I16.74
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G511.27
testis, embryo E13.CNhs11031.389-23F59.57
testis, embryo E15.CNhs11034.443-27C510.75
testis, embryo E16.CNhs11033.470-26G511.67
testis, embryo E17.CNhs11029.486-18I510.59
testis, embryo E18.CNhs11027.503-18G513.35
testis, neonate N00.CNhs11189.1300-22B714.43
testis, neonate N07.CNhs11222.726-26I421.87
testis, neonate N10.CNhs11204.763-44D916.36
testis, neonate N20.CNhs11110.839-18H312.32
testis, neonate N30.CNhs11130.1391-42E216.42
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I45.27
thymus, embryo E15.CNhs11005.430-45I25.03
thymus, embryo E16.CNhs11002.456-26C54.94
thymus, embryo E17.CNhs10581.478-18C15.37
thymus, embryo E18.CNhs10595.1273-19G44.77
thymus, neonate N02.CNhs11181.1541-43F82.52
thymus, neonate N03.CNhs11137.2104-43C72.66
thymus, neonate N06.CNhs11197.681-26C41.82
thymus, neonate N07.CNhs11211.713-19D32.06
thymus, neonate N10.CNhs11194.748-24E41.21
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G72.31
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B426.07
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.59
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.04
urinary bladder, adult.CNhs10481.879-12E422.41
uterus, adult pregnant day19.CNhs10497.590-15F512.57
uterus, adult.CNhs10509.92-27E516.85
vagina, adult.CNhs10502.89-27D516.29
vesicular gland, adult.CNhs10491.51-27F810.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.77
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.94
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.05
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D724.40
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A430.83
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A531.73
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A635.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.07
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A829.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A930.55
whole body, embryo E11.CNhs11014.324-5I88.93
whole body, embryo E12.CNhs10587.857-27C911.57
whole body, embryo E13.CNhs10512.372-23H29.39
whole body, embryo E14.5.CNhs10578.420-27D211.91
whole body, embryo E14.CNhs10519.395-14B19.01
whole body, embryo E16.CNhs10514.453-14F216.36
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.39
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.48
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.41
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.93
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G514.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.45
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.56
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.38
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.78
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.44
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.91
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.70
whole body, embryo E17.5.CNhs10513.490-9F911.96
whole body, embryo E17.CNhs10517.475-3I511.49
whole body, embryo E18.CNhs10516.493-3B310.53
whole body, neonate N00.CNhs10525.657-19C214.61
whole body, neonate N01.CNhs10576.659-23C616.26
whole body, neonate N06.CNhs10515.692-21D117.87
whole body, neonate N10.CNhs10518.761-6B413.68





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
anatomical conduit2.02e-18122
tube2.10e-17114
structure with developmental contribution from neural crest1.71e-1092
subdivision of trunk1.37e-0866
ectoderm-derived structure2.71e-0895
ectoderm2.71e-0895
presumptive ectoderm2.71e-0895
nervous system2.90e-0875
central nervous system7.50e-0873
embryo5.82e-07320
compound organ6.43e-0743
tissue7.78e-07349
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