CL:0002595: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0002595
|name=smooth muscle cell of the subclavian artery
|namespace=cell
|def="A smooth muscle cell of the subclavian artery." [GOC:tfm]
|xref=
|is_a=CL:000...") |
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|comment= | |comment= | ||
|created_by=tmeehan | |created_by=tmeehan | ||
| | |def="A smooth muscle cell of the subclavian artery." [GOC:tfm] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0002595 | |||
|is_a=CL:0000359 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=smooth muscle cell of the subclavian artery | |||
|namespace=FANTOM | |||
|obo_creation_date=2011-03-06T05:01:52Z | |||
|part_of=UBERON:0001533 | |part_of=UBERON:0001533 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |||
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}} | }} | ||
Latest revision as of 16:45, 12 September 2014
| Name: | smooth muscle cell of the subclavian artery |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A smooth muscle cell of the subclavian artery." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-03-06T05:01:52Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000359(vascular associated smooth muscle cell) |
|---|---|
| part_of: | UBERON:0001533(subclavian artery) |
Children
| is a: | CL:0002593 (smooth muscle cell of the internal thoracic artery) |
|---|---|
| derives from: | FF:0000175 (human smooth muscle cell of subclavian artery sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
- 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
- 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
- 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
- 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
- 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)
Mouse (Mus musculus)
- 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
- 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
- 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
- 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
- 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
- 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002595 (smooth muscle cell of the subclavian artery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.65e-59 | FFCP PHASE2:Hg19::chr19:18319115..18319122,+#_9750e2c3f2ff6c42150680876e8e32ce | p@chr19:18319115..18319122, + |
| 1.65e-59 | FFCP PHASE1:Hg19::chr19:18319115..18319122,+#_9750e2c3f2ff6c42150680876e8e32ce | p@chr19:18319115..18319122, + |
| 3.22e-57 | FFCP PHASE1:Hg19::chr9:3898831..3898843,-#_f62e85c2a7b91ed5e15e1598c0415e32 | p@chr9:3898831..3898843, - |
| 3.22e-57 | FFCP PHASE2:Hg19::chr9:3898831..3898843,-#_f62e85c2a7b91ed5e15e1598c0415e32 | p@chr9:3898831..3898843, - |
| 1.94e-51 | FFCP PHASE2:Hg19::chr13:67922393..67922399,-#_295efaa1b7d2308843b76267a06c4213 | p@chr13:67922393..67922399, - |
| 1.94e-51 | FFCP PHASE1:Hg19::chr13:67922393..67922399,-#_295efaa1b7d2308843b76267a06c4213 | p@chr13:67922393..67922399, - |
| 2.3e-51 | FFCP PHASE2:Hg19::chr8:4812273..4812274,-#_4c8efb0d58953af208ce0173f1968ad5 | p@chr8:4812273..4812274, - |
| 2.3e-51 | FFCP PHASE1:Hg19::chr8:4812273..4812274,-#_4c8efb0d58953af208ce0173f1968ad5 | p@chr8:4812273..4812274, - |
| 1.42e-40 | FFCP PHASE2:Hg19::chr11:102668160..102668174,+#_a1b66a70f8c814a5882964ede05f077d | p@chr11:102668160..102668174, + |
| 1.42e-40 | FFCP PHASE1:Hg19::chr11:102668160..102668174,+#_a1b66a70f8c814a5882964ede05f077d | p@chr11:102668160..102668174, + |
| 1.48e-40 | FFCP PHASE2:Hg19::chr21:29911657..29911665,+#_d3691e0068f6c38975e2711bdd8dff83 | p2@LINC00161 |
| 1.48e-40 | FFCP PHASE1:Hg19::chr21:29911657..29911665,+#_d3691e0068f6c38975e2711bdd8dff83 | p2@LINC00161 |
| 3.31e-40 | FFCP PHASE1:Hg19::chr6:50692227..50692236,+#_af04ac070d32747e3a52dd2fbc7ea984 | p@chr6:50692227..50692236, + |
| 3.31e-40 | FFCP PHASE1:Hg19::chr9:3899086..3899097,-#_af04ac070d32747e3a52dd2fbc7ea984 | p@chr9:3899086..3899097, - |
| 3.31e-40 | FFCP PHASE2:Hg19::chr9:3899086..3899097,-#_af04ac070d32747e3a52dd2fbc7ea984 | p@chr9:3899086..3899097, - |
| 3.31e-40 | FFCP PHASE2:Hg19::chr6:50692227..50692236,+#_af04ac070d32747e3a52dd2fbc7ea984 | p@chr6:50692227..50692236, + |
| 4.35e-40 | FFCP PHASE2:Hg19::chrY:16915943..16915949,-#_bf7c191c9fd899655b04c9c556c8b86a | p1@NLGN4Y-AS1 |
| 4.35e-40 | FFCP PHASE1:Hg19::chrY:16915943..16915949,-#_bf7c191c9fd899655b04c9c556c8b86a | p1@NLGN4Y-AS1 |
| 2.29e-38 | FFCP PHASE2:Hg19::chr7:93516564..93516575,+#_e57e8bfd5a27ffe582d928c684b502f7 | p@chr7:93516564..93516575, + |
| 2.29e-38 | FFCP PHASE1:Hg19::chr7:93516564..93516575,+#_e57e8bfd5a27ffe582d928c684b502f7 | p@chr7:93516564..93516575, + |
| 2.0e-36 | FFCP PHASE2:Hg19::chr19:55877364..55877367,-#_a034f8dd14f3273239abaa7afcbae834 | p@chr19:55877364..55877367, - |
| 2.0e-36 | FFCP PHASE1:Hg19::chr19:55877364..55877367,-#_a034f8dd14f3273239abaa7afcbae834 | p@chr19:55877364..55877367, - |
| 2.07e-36 | FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_28d1461f269629fe2b1bd3488317db76 | p@chr6:53359400..53359406, + |
| 2.07e-36 | FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_28d1461f269629fe2b1bd3488317db76 | p@chr6:53359400..53359406, + |
| 2.55e-36 | FFCP PHASE2:Hg19::chr7:93519591..93519595,-#_5e660e0f90e996ede1c6d609bfa9fe5d | p9@TFPI2 |
| 2.55e-36 | FFCP PHASE1:Hg19::chr7:93519591..93519595,-#_5e660e0f90e996ede1c6d609bfa9fe5d | p9@TFPI2 |
| 7.75e-34 | FFCP PHASE2:Hg19::chr21:30000326..30000330,+#_351130c55d7b9c86eeccc20735662f26 | p@chr21:30000326..30000330, + |
| 7.75e-34 | FFCP PHASE1:Hg19::chr21:30000326..30000330,+#_351130c55d7b9c86eeccc20735662f26 | p@chr21:30000326..30000330, + |
| 6.67e-33 | FFCP PHASE1:Hg19::chr9:3898804..3898817,-#_f63597f0626490d18a0598f805a0716e | p@chr9:3898804..3898817, - |
| 6.67e-33 | FFCP PHASE2:Hg19::chr9:3898804..3898817,-#_f63597f0626490d18a0598f805a0716e | p@chr9:3898804..3898817, - |
| 9.62e-32 | FFCP PHASE1:Hg19::chr4:74702707..74702718,+#_eabd76d094a9802898cd37ce111975ad | p7@CXCL6 |
| 9.62e-32 | FFCP PHASE2:Hg19::chr4:74702707..74702718,+#_eabd76d094a9802898cd37ce111975ad | p7@CXCL6 |
| 2.86e-30 | FFCP PHASE2:Hg19::chr11:27723059..27723067,-#_6740f341cfc448753c51cdd8de690b63 | p11@BDNF |
| 2.86e-30 | FFCP PHASE1:Hg19::chr11:27723059..27723067,-#_6740f341cfc448753c51cdd8de690b63 | p11@BDNF |
| 6.35e-30 | FFCP PHASE2:Hg19::chr12:63025600..63025629,+#_9a12846e3ab8e2be9d48c8748de2d57e | p@chr12:63025600..63025629, + |
| 6.35e-30 | FFCP PHASE1:Hg19::chr12:63025600..63025629,+#_9a12846e3ab8e2be9d48c8748de2d57e | p@chr12:63025600..63025629, + |
| 1.14e-29 | FFCP PHASE2:Hg19::chr7:93515914..93515935,-#_0bd172573f2d45e4a1e66bf1fb8feb15 | p@chr7:93515914..93515935, - |
| 1.14e-29 | FFCP PHASE1:Hg19::chr7:93515914..93515935,-#_0bd172573f2d45e4a1e66bf1fb8feb15 | p@chr7:93515914..93515935, - |
| 3.44e-29 | FFCP PHASE1:Hg19::chr10:35930025..35930031,-#_e3b44668a6323aeaf7ad26c75eaa41b9 | p1@FZD8 |
| 3.44e-29 | FFCP PHASE2:Hg19::chr10:35930025..35930031,-#_e3b44668a6323aeaf7ad26c75eaa41b9 | p1@FZD8 |
| 5.33e-29 | FFCP PHASE2:Hg19::chrX:142113711..142113717,+#_dfaf394a6da737f8fba3b877a23a7dc4 | p1@SPANXN4 |
| 5.33e-29 | FFCP PHASE1:Hg19::chrX:142113711..142113717,+#_dfaf394a6da737f8fba3b877a23a7dc4 | p1@SPANXN4 |
| 1.16e-28 | FFCP PHASE1:Hg19::chr11:102662218..102662229,-#_22415daef6ca25fc5a564f6d44355f9e | p@chr11:102662218..102662229, - |
| 1.16e-28 | FFCP PHASE2:Hg19::chr11:102662218..102662229,-#_22415daef6ca25fc5a564f6d44355f9e | p@chr11:102662218..102662229, - |
| 2.11e-28 | FFCP PHASE2:Hg19::chr4:54931877..54931892,-#_66de3796f4d60f25d4067f878969a78f | p@chr4:54931877..54931892, - |
| 2.11e-28 | FFCP PHASE1:Hg19::chr4:54931877..54931892,-#_66de3796f4d60f25d4067f878969a78f | p@chr4:54931877..54931892, - |
| 4.13e-28 | FFCP PHASE1:Hg19::chr9:33797932..33797960,-#_05ecb8d5af8ba581a00976e79c72caec | p@chr9:33797932..33797960, - |
| 4.13e-28 | FFCP PHASE2:Hg19::chr9:33797932..33797960,-#_05ecb8d5af8ba581a00976e79c72caec | p@chr9:33797932..33797960, - |
| 5.46e-28 | FFCP PHASE2:Hg19::chr19:52076425..52076440,+#_a30e47d1088d0e2fd1634469080bd83e | p2@ZNF175 |
| 5.46e-28 | FFCP PHASE1:Hg19::chr19:52076425..52076440,+#_a30e47d1088d0e2fd1634469080bd83e | p2@ZNF175 |
| 5.51e-28 | FFCP PHASE1:Hg19::chr17:32583293..32583323,-#_f324cef18d77da6e5fba21309f642a2f | p@chr17:32583293..32583323, - |
| 5.51e-28 | FFCP PHASE2:Hg19::chr17:32583293..32583323,-#_f324cef18d77da6e5fba21309f642a2f | p@chr17:32583293..32583323, - |
| 8.03e-28 | FFCP PHASE2:Hg19::chr5:150157860..150157883,+#_6e23273ac0817b8d8fe92f504c77ad1b | p4@C5orf62 |
| 8.03e-28 | FFCP PHASE1:Hg19::chr5:150157860..150157883,+#_6e23273ac0817b8d8fe92f504c77ad1b | p4@C5orf62 |
| 1.46e-27 | FFCP PHASE1:Hg19::chr3:172351514..172351536,-#_59283fbcac21bba53895d1bd44543cee | p@chr3:172351514..172351536, - |
| 1.46e-27 | FFCP PHASE2:Hg19::chr3:172351514..172351536,-#_59283fbcac21bba53895d1bd44543cee | p@chr3:172351514..172351536, - |
| 1.66e-27 | FFCP PHASE2:Hg19::chr2:113587914..113587925,+#_31b9471d58e0167ffc78360453368a9f | p@chr2:113587914..113587925, + |
| 1.66e-27 | FFCP PHASE1:Hg19::chr2:113587914..113587925,+#_31b9471d58e0167ffc78360453368a9f | p@chr2:113587914..113587925, + |
| 2.38e-27 | FFCP PHASE2:Hg19::chr4:169022528..169022531,+#_abfa887e2cbeacf0a4ff418071b77d43 | p@chr4:169022528..169022531, + |
| 2.38e-27 | FFCP PHASE1:Hg19::chr4:169022528..169022531,+#_abfa887e2cbeacf0a4ff418071b77d43 | p@chr4:169022528..169022531, + |
| 2.72e-27 | FFCP PHASE1:Hg19::chr10:77056181..77056190,+#_3322f46e3cc3efd312b99f020a36fc2d | p2@ZNF503-AS1 |
| 2.72e-27 | FFCP PHASE2:Hg19::chr10:77056181..77056190,+#_3322f46e3cc3efd312b99f020a36fc2d | p2@ZNF503-AS1 |
| 2.72e-27 | FFCP PHASE1:Hg19::chr18:68919827..68919832,+#_3322f46e3cc3efd312b99f020a36fc2d | p@chr18:68919827..68919832, + |
| 2.72e-27 | FFCP PHASE2:Hg19::chr18:68919827..68919832,+#_3322f46e3cc3efd312b99f020a36fc2d | p@chr18:68919827..68919832, + |
| 4.63e-27 | FFCP PHASE2:Hg19::chr3:157206111..157206139,-#_6f67c520710579df9c0b0de270a43925 | p@chr3:157206111..157206139, - |
| 4.63e-27 | FFCP PHASE1:Hg19::chr3:157206111..157206139,-#_6f67c520710579df9c0b0de270a43925 | p@chr3:157206111..157206139, - |
| 4.63e-27 | FFCP PHASE2:Hg19::chr3:151514337..151514348,+#_6f67c520710579df9c0b0de270a43925 | p@chr3:151514337..151514348, + |
| 4.63e-27 | FFCP PHASE1:Hg19::chr3:151514337..151514348,+#_6f67c520710579df9c0b0de270a43925 | p@chr3:151514337..151514348, + |
| 6.82e-27 | FFCP PHASE1:Hg19::chr5:54281153..54281165,-#_85b05c16e5939683de9d1bb2cfa6d43a | p1@AB590689 |
| 6.82e-27 | FFCP PHASE2:Hg19::chr5:54281153..54281165,-#_85b05c16e5939683de9d1bb2cfa6d43a | p1@AB590689 |
| 7.86e-27 | FFCP PHASE2:Hg19::chr4:74902919..74902931,-#_f71d19a2418624eb80947a0f58ca3b5a | p@chr4:74902919..74902931, - |
| 7.86e-27 | FFCP PHASE1:Hg19::chr4:74902919..74902931,-#_f71d19a2418624eb80947a0f58ca3b5a | p@chr4:74902919..74902931, - |
| 9.32e-27 | FFCP PHASE2:Hg19::chr7:93519528..93519538,-#_fce4153389c2a4d01183a0ffbc0d5b53 | p7@TFPI2 |
| 9.32e-27 | FFCP PHASE1:Hg19::chr7:93519528..93519538,-#_fce4153389c2a4d01183a0ffbc0d5b53 | p7@TFPI2 |
| 1.7e-26 | FFCP PHASE1:Hg19::chr11:102668185..102668198,-#_c98ec5a7b5e61f0558f75c38161de903 | p12@MMP1 |
| 1.7e-26 | FFCP PHASE2:Hg19::chr11:102668185..102668198,-#_c98ec5a7b5e61f0558f75c38161de903 | p12@MMP1 |
| 3.65e-26 | FFCP PHASE2:Hg19::chr7:93519576..93519598,+#_5ec89969c55add601c9139cefcdeabe4 | p@chr7:93519576..93519598, + |
| 3.65e-26 | FFCP PHASE1:Hg19::chr7:93519576..93519598,+#_5ec89969c55add601c9139cefcdeabe4 | p@chr7:93519576..93519598, + |
| 4.43e-26 | FFCP PHASE2:Hg19::chr1:12010434..12010450,+#_66b4086cadc5adac01e3becd86a0caf1 | p@chr1:12010434..12010450, + |
| 4.43e-26 | FFCP PHASE1:Hg19::chr1:12010434..12010450,+#_66b4086cadc5adac01e3becd86a0caf1 | p@chr1:12010434..12010450, + |
| 4.97e-26 | FFCP PHASE2:Hg19::chr8:42042635..42042650,-#_84a706138b589bbed5635cba5d6f2660 | p4@PLAT |
| 4.97e-26 | FFCP PHASE1:Hg19::chr8:42042635..42042650,-#_84a706138b589bbed5635cba5d6f2660 | p4@PLAT |
| 8.4e-26 | FFCP PHASE1:Hg19::chr7:93515840..93515856,-#_fb8c6ba6d41813f36e376174d0ca4a60 | p@chr7:93515840..93515856, - |
| 8.4e-26 | FFCP PHASE2:Hg19::chr7:93515840..93515856,-#_fb8c6ba6d41813f36e376174d0ca4a60 | p@chr7:93515840..93515856, - |
| 2.89e-25 | FFCP PHASE2:Hg19::chr9:6257179..6257191,+#_dc0024d664057cc3982b7976dd521010 | p@chr9:6257179..6257191, + |
| 2.89e-25 | FFCP PHASE1:Hg19::chr9:6257179..6257191,+#_dc0024d664057cc3982b7976dd521010 | p@chr9:6257179..6257191, + |
| 3.95e-25 | FFCP PHASE1:Hg19::chr8:42044977..42044996,-#_cc3c741e1acbb174de74d07b61dcfa32 | p@chr8:42044977..42044996, - |
| 3.95e-25 | FFCP PHASE2:Hg19::chr8:42044977..42044996,-#_cc3c741e1acbb174de74d07b61dcfa32 | p@chr8:42044977..42044996, - |
| 4.18e-25 | FFCP PHASE2:Hg19::chr21:28216589..28216607,-#_48695fa96ccbb3155279c2b6a0e09d64 | p2@ADAMTS1 |
| 4.18e-25 | FFCP PHASE1:Hg19::chr21:28216589..28216607,-#_48695fa96ccbb3155279c2b6a0e09d64 | p2@ADAMTS1 |
| 1.2e-24 | FFCP PHASE2:Hg19::chr3:112081052..112081065,-#_c750c1ebb88d918f99b08a32f19358f4 | p@chr3:112081052..112081065, - |
| 1.2e-24 | FFCP PHASE1:Hg19::chr3:112081052..112081065,-#_c750c1ebb88d918f99b08a32f19358f4 | p@chr3:112081052..112081065, - |
| 2.08e-24 | FFCP PHASE1:Hg19::chr3:67141193..67141198,+#_7503719273af841a4c730bba72ff47b6 | p@chr3:67141193..67141198, + |
| 2.08e-24 | FFCP PHASE2:Hg19::chr3:67141193..67141198,+#_7503719273af841a4c730bba72ff47b6 | p@chr3:67141193..67141198, + |
| 4.08e-24 | FFCP PHASE2:Hg19::chr8:122653115..122653124,-#_ce75a09d48a99e391e10766b5d30688d | p7@HAS2 |
| 4.08e-24 | FFCP PHASE1:Hg19::chr8:122653115..122653124,-#_ce75a09d48a99e391e10766b5d30688d | p7@HAS2 |
| 4.76e-24 | FFCP PHASE2:Hg19::chr9:6256728..6256739,+#_ab4fcadb54edc92bf0106eb589c912b7 | p@chr9:6256728..6256739, + |
| 4.76e-24 | FFCP PHASE1:Hg19::chr9:6256728..6256739,+#_ab4fcadb54edc92bf0106eb589c912b7 | p@chr9:6256728..6256739, + |
| 6.41e-24 | FFCP PHASE2:Hg19::chr2:224839877..224839882,+#_fdc05fa4fe628d6cebf5877c56f56a37 | p@chr2:224839877..224839882, + |
| 6.41e-24 | FFCP PHASE1:Hg19::chr2:224839877..224839882,+#_fdc05fa4fe628d6cebf5877c56f56a37 | p@chr2:224839877..224839882, + |
