FFCP PHASE1:Mm9::chr7:112782039..112782115,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=55992 | |EntrezGene=55992 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1083 | |||
|TSSclassifier=NA | |||
|UniProt=Q9R1R2,Q3TDT0,D3Z7V9 | |UniProt=Q9R1R2,Q3TDT0,D3Z7V9 | ||
|association_with_transcript=0bp_to_ENSMUST00000057525,ENSMUST00000106789,ENSMUST00000106792,ENSMUST00000140882,ENSMUST00000153371_5end | |association_with_transcript=0bp_to_ENSMUST00000057525,ENSMUST00000106789,ENSMUST00000106792,ENSMUST00000140882,ENSMUST00000153371_5end | ||
|cluster_id=chr7:112782039..112782115,- | |||
|description=CAGE_peak_1_at_Trim3_5end | |description=CAGE_peak_1_at_Trim3_5end | ||
|id=chr7:112782039..112782115,- | |id=chr7:112782039..112782115,- | ||
|ontology_enrichment_celltype=CL:0000055!1.43e-18!50;CL:0002319!5.27e-17!43;CL:0000221!1.39e-16!44;CL:0000133!1.39e-16!44;CL:0000393!1.54e-14!39;CL:0000211!1.54e-14!39;CL:0000540!3.06e-13!33;CL:0000047!3.06e-13!33;CL:0000031!3.06e-13!33;CL:0000404!3.06e-13!33;CL:0000117!2.11e-12!23;CL:0000337!2.11e-12!23;CL:0002321!9.95e-09!70;CL:0000220!9.95e-09!70 | |ontology_enrichment_celltype=CL:0000055!1.43e-18!50;CL:0002319!5.27e-17!43;CL:0000221!1.39e-16!44;CL:0000133!1.39e-16!44;CL:0000393!1.54e-14!39;CL:0000211!1.54e-14!39;CL:0000540!3.06e-13!33;CL:0000047!3.06e-13!33;CL:0000031!3.06e-13!33;CL:0000404!3.06e-13!33;CL:0000117!2.11e-12!23;CL:0000337!2.11e-12!23;CL:0002321!9.95e-09!70;CL:0000220!9.95e-09!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.27e-17,43;CL:0000221,1.39e-16,44;CL:0000133,1.39e-16,44;CL:0000393,1.54e-14,39;CL:0000211,1.54e-14,39;CL:0000540,3.06e-13,33;CL:0000047,3.06e-13,33;CL:0000031,3.06e-13,33;CL:0000404,3.06e-13,33;CL:0000117,2.11e-12,23;CL:0000337,2.11e-12,23;CL:0002321,9.88e-09,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.15e-29!75;UBERON:0001016!6.15e-29!75;UBERON:0001017!3.35e-28!73;UBERON:0005743!3.35e-28!73;UBERON:0004121!2.98e-23!102;UBERON:0000924!2.98e-23!102;UBERON:0006601!2.98e-23!102;UBERON:0001049!9.00e-21!52;UBERON:0005068!9.00e-21!52;UBERON:0006241!9.00e-21!52;UBERON:0007135!9.00e-21!52;UBERON:0000955!4.22e-19!50;UBERON:0006238!4.22e-19!50;UBERON:0002616!1.02e-18!49;UBERON:0002020!1.49e-17!34;UBERON:0002346!2.52e-17!71;UBERON:0003075!2.52e-17!71;UBERON:0007284!2.52e-17!71;UBERON:0000033!2.81e-17!63;UBERON:0000025!1.79e-14!114;UBERON:0002791!2.92e-14!29;UBERON:0003528!2.92e-14!29;UBERON:0001893!2.92e-14!29;UBERON:0004111!3.25e-14!122;UBERON:0003080!1.23e-13!40;UBERON:0002780!2.98e-13!39;UBERON:0001890!2.98e-13!39;UBERON:0006240!2.98e-13!39;UBERON:0003056!4.92e-13!49;UBERON:0000956!9.80e-10!21;UBERON:0001869!9.80e-10!21;UBERON:0000203!9.80e-10!21;UBERON:0002619!1.87e-08!17;UBERON:0003076!3.54e-08!12;UBERON:0003057!3.54e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.14e-29,75;UBERON:0001017,3.35e-28,73;UBERON:0004121,5.84e-26,95;UBERON:0000924,5.84e-26,95;UBERON:0006601,5.84e-26,95;UBERON:0000073,4.17e-22,54;UBERON:0001049,8.99e-21,52;UBERON:0005068,8.99e-21,52;UBERON:0006241,8.99e-21,52;UBERON:0007135,8.99e-21,52;UBERON:0002346,2.39e-20,64;UBERON:0003075,2.39e-20,64;UBERON:0007284,2.39e-20,64;UBERON:0010371,9.13e-18,73;UBERON:0002020,1.49e-17,34;UBERON:0000955,2.78e-17,47;UBERON:0006238,2.78e-17,47;UBERON:0002616,6.58e-17,46;UBERON:0010314,1.07e-16,92;UBERON:0000025,1.79e-14,114;UBERON:0003528,2.92e-14,29;UBERON:0002791,2.92e-14,29;UBERON:0001893,2.92e-14,29;UBERON:0004111,3.24e-14,122;UBERON:0003080,1.23e-13,40;UBERON:0002780,2.98e-13,39;UBERON:0001890,2.98e-13,39;UBERON:0006240,2.98e-13,39;UBERON:0003056,4.92e-13,49;UBERON:0000956,9.80e-10,21;UBERON:0001869,9.80e-10,21;UBERON:0000203,9.80e-10,21;UBERON:0002619,1.87e-08,17;UBERON:0003076,3.54e-08,12;UBERON:0003057,3.54e-08,12 | |||
|phase1_expression=8.96833543786846,1.39590163055744,2.27499619694768,1.81478526784098,0.500895729946347,3.02182689441402,2.10251376535973,2.1950964985068,2.39340827657833,1.40438715793196,1.54096171402954,2.71225340584144,3.25281386869291,1.31130603628496,2.6648780945253,2.63217847606774,2.79824751251259,3.62781490161973,4.38766187538364,3.81950686618227,16.0731818385522,3.3758923408301,3.39559725880616,0.799962113967033,2.52350209173887,1.14846392823004,0.430761996159075,1.72376986148711,0.950117097281869,1.51218077855958,0.886922042621219,2.54012269383853,4.30545351309199,0,0.577703239502549,1.49611180822643,1.83752420636132,3.76678467663217,1.5626706890476,2.09409497589519,5.88231488031014,0.683045484958446,1.94204141212461,16.4924831548006,18.6533553443907,11.7469921383476,52.4202200713186,19.8402892306206,20.8701873597748,18.2764105129826,29.9570942278276,23.0004102983955,3.85899993932794,0,1.68046899571232,20.3234954468398,20.057340795713,25.2679325215947,28.3243045203437,37.5583595283143,27.2547503507657,36.2563649313971,33.7932022522233,27.8968912357234,13.8441290759376,24.1563239081674,28.4620104992484,20.3635701820424,21.3600601355464,19.9808788730902,19.3498964443271,48.5606673486466,43.0693654855646,17.2712026893085,19.3607851456837,22.0612508786405,28.6301290598411,43.541382287049,38.7088463805734,34.02666223439,33.4844775584819,30.7338888628488,40.4815348552002,36.5795696520592,33.6156145108982,35.0608016713665,37.7284954117623,37.0934897192348,21.4305127132911,17.2303157043471,23.1891590961342,15.487629785665,1.3599426674155,4.31762553310254,1.94932925234301,3.58421509677868,5.89866564553358,17.0430322578058,11.4305842025262,12.7202246823722,9.43650912503759,29.5150898052931,33.1246811618639,49.7746692207332,8.87613268145978,6.58735650235256,7.07734223020697,4.90990682791958,5.95557132388495,8.16431764856536,9.54169297213747,6.69824052286711,6.22661842591358,6.17962826265753,10.9357497636205,7.91699525376955,14.5845030963281,13.158541479712,8.84610551949874,10.0295446967394,8.61281921995535,7.75800405016355,0,67.0468025156443,84.4070228458224,3.0654846625031,1.7972268675888,2.99951365496704,1.90605340609597,25.7639899776295,34.7700458142156,34.303638126812,31.462201954802,36.3115949409069,29.298114282898,30.5013574567384,15.9887801244997,7.83763914843586,9.35074206204597,9.25944165900485,7.41686524887411,11.4951052216736,9.18316862007281,13.7141384230501,16.600905792924,14.2206229516183,19.3962569838639,15.0047955028629,6.03590380211958,9.45530400839096,11.6127741948206,10.9597866213787,11.6779844674751,11.8405736617537,11.5237996388448,9.15557627365069,2.1066395619397,2.57347907114715,3.9782889915383,7.87077935634907,6.56672967947069,9.00310307305074,8.99629995223799,11.0187969778546,10.0273623376796,9.76642567951713,13.413670069981,14.2453717687947,12.5065485934245,11.8200574136949,13.3763535750662,13.8889988054066,14.0512073786272,14.3600868073598,28.3891430561572,29.9452422023718,1.32167513193519,2.64450566663544,7.25180051819795,9.28946687441754,9.92279452180119,6.6555563125703,6.67134131534611,6.08722003560189,3.79623249235609,6.25856027951241,8.29406189040889,6.96347652144028,8.57841983324129,8.08937467788799,3.8904848977445,4.97853183135918,6.63837653335786,8.91138398355885,6.76246414038483,11.2008230314923,9.11576689687841,13.8167565183928,15.3032419840703,10.775540802511,10.9899109488962,11.9695249004147,4.15033677922008,2.00214126859313,4.12773889737726,2.47348323623339,1.42002084971952,4.10001171579109,5.0925170356284,6.32931502391783,4.86405680325106,4.66754402419738,4.31304619582064,5.58211421502755,4.05648975048929,5.55673531483646,4.66433275156972,9.64887042726734,28.2672380954905,10.2325362356062,13.2001630918041,11.712410918488,13.1426539041561,26.9685074481323,29.7554551107517,43.1245361765735,32.6304748299815,33.441168136965,36.5151420225645,26.5458569839496,31.428666699593,41.0803326371493,16.5870412333199,21.7562273527484,4.91764273019036,9.10591262805617,28.578005017827,29.7717683944196,8.36068221421045,12.876017287423,17.0374438484779,15.2271110275689,12.4945570685023,14.3381278771531,15.5959071857676,20.0984336860071,16.5972387686707,23.380468632905,22.5314033429518,22.8138134659483,10.5035663054119,16.3820355373875,16.7773568134183,15.3422214364458,1.32745138339963,5.82673526771955,7.86041248108353,6.41257271170054,10.9261700365886,9.53048958626175,8.01127708821486,8.72480950746013,9.9819265947722,6.95280867458795,10.5418608574999,10.3135543248187,12.9367050186439,10.0834212657534,10.0899773350549,8.78781843629528,9.22169214939823,11.4156043265325,13.8221177305782,15.22324745573,9.85621173867584,10.591603543191,11.0264199027481,13.1909002353184,14.3703339759356,9.71038091343309,8.8335534562321,8.53532678674319,6.41257840585672,32.4494278518392,3.41741761595705,9.28740905834501,6.2966139305702,2.0720530270516,2.59719032669948,2.97411625168479,2.03974115992626,2.23922323717853,2.76399947608848,10.5013767981662,10.1227517945963,6.09958401380546,8.5324219249223,8.572620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| ||
|short_description=p1@Trim3 | |short_description=p1@Trim3 | ||
}} | }} |
Latest revision as of 16:37, 25 September 2015
Short description: | p1@Trim3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trim3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1083 |
Association with transcript: | 0bp_to_ENSMUST00000057525, ENSMUST00000106789, ENSMUST00000106792, ENSMUST00000140882, ENSMUST00000153371_5end |
EntrezGene: | Trim3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.27e-17 | 43 |
ectodermal cell | 1.39e-16 | 44 |
neurectodermal cell | 1.39e-16 | 44 |
electrically responsive cell | 1.54e-14 | 39 |
electrically active cell | 1.54e-14 | 39 |
neuron | 3.06e-13 | 33 |
neuronal stem cell | 3.06e-13 | 33 |
neuroblast | 3.06e-13 | 33 |
electrically signaling cell | 3.06e-13 | 33 |
CNS neuron (sensu Vertebrata) | 2.11e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.11e-12 | 23 |
embryonic cell | 9.88e-09 | 70 |