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FFCP PHASE1:Mm9::chr9:114843047..114843117,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=333433
|EntrezGene=333433
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q3ULJ0,B2RSR7
|UniProt=Q3ULJ0,B2RSR7
|association_with_transcript=0bp_to_ENSMUST00000146623,NM_175380,uc009ryj.2,uc009ryk.2_5end
|association_with_transcript=0bp_to_ENSMUST00000146623,NM_175380,uc009ryj.2,uc009ryk.2_5end
|cluster_id=chr9:114843047..114843117,-
|description=CAGE_peak_2_at_Gpd1l_5end
|description=CAGE_peak_2_at_Gpd1l_5end
|id=chr9:114843047..114843117,-
|id=chr9:114843047..114843117,-
|ontology_enrichment_celltype=CL:0000117!1.28e-12!23;CL:0000337!1.28e-12!23;CL:0000221!6.17e-10!44;CL:0000133!6.17e-10!44;CL:0002319!1.16e-09!43;CL:0000055!1.30e-08!50;CL:0000540!1.77e-07!33;CL:0000047!1.77e-07!33;CL:0000031!1.77e-07!33;CL:0000404!1.77e-07!33;CL:0000393!7.45e-07!39;CL:0000211!7.45e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.27e-12,23;CL:0000337,1.27e-12,23;CL:0000221,6.16e-10,44;CL:0000133,6.16e-10,44;CL:0002319,1.16e-09,43;CL:0000540,1.77e-07,33;CL:0000047,1.77e-07,33;CL:0000031,1.77e-07,33;CL:0000404,1.77e-07,33;CL:0000393,7.44e-07,39;CL:0000211,7.44e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.96e-27!73;UBERON:0005743!6.96e-27!73;UBERON:0001049!7.02e-27!52;UBERON:0005068!7.02e-27!52;UBERON:0006241!7.02e-27!52;UBERON:0007135!7.02e-27!52;UBERON:0000955!1.27e-25!50;UBERON:0006238!1.27e-25!50;UBERON:0000073!1.65e-25!75;UBERON:0001016!1.65e-25!75;UBERON:0002616!5.42e-25!49;UBERON:0000033!8.46e-24!63;UBERON:0004121!1.16e-21!102;UBERON:0000924!1.16e-21!102;UBERON:0006601!1.16e-21!102;UBERON:0002346!1.78e-21!71;UBERON:0003075!1.78e-21!71;UBERON:0007284!1.78e-21!71;UBERON:0002020!2.06e-20!34;UBERON:0003080!9.94e-20!40;UBERON:0002780!3.83e-19!39;UBERON:0001890!3.83e-19!39;UBERON:0006240!3.83e-19!39;UBERON:0003056!3.02e-18!49;UBERON:0002791!2.56e-17!29;UBERON:0003528!2.56e-17!29;UBERON:0001893!2.56e-17!29;UBERON:0007811!5.64e-15!86;UBERON:0004111!2.77e-13!122;UBERON:0000956!3.79e-13!21;UBERON:0001869!3.79e-13!21;UBERON:0000203!3.79e-13!21;UBERON:0000025!5.67e-13!114;UBERON:0000153!7.18e-12!94;UBERON:0002619!3.53e-11!17;UBERON:0002021!6.52e-08!10;UBERON:0000411!6.52e-08!10;UBERON:0001950!6.52e-08!10;UBERON:0003076!1.20e-07!12;UBERON:0003057!1.20e-07!12;UBERON:0000477!3.42e-07!154
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.42e-28,54;UBERON:0001017,6.92e-27,73;UBERON:0001049,6.98e-27,52;UBERON:0005068,6.98e-27,52;UBERON:0006241,6.98e-27,52;UBERON:0007135,6.98e-27,52;UBERON:0001016,1.64e-25,75;UBERON:0000955,1.16e-23,47;UBERON:0006238,1.16e-23,47;UBERON:0002616,4.82e-23,46;UBERON:0002346,7.84e-23,64;UBERON:0003075,7.84e-23,64;UBERON:0007284,7.84e-23,64;UBERON:0010314,1.67e-22,92;UBERON:0004121,2.41e-22,95;UBERON:0000924,2.41e-22,95;UBERON:0006601,2.41e-22,95;UBERON:0010371,2.32e-21,73;UBERON:0002020,2.06e-20,34;UBERON:0003080,9.90e-20,40;UBERON:0002780,3.81e-19,39;UBERON:0001890,3.81e-19,39;UBERON:0006240,3.81e-19,39;UBERON:0003056,3.01e-18,49;UBERON:0003528,2.55e-17,29;UBERON:0002791,2.55e-17,29;UBERON:0001893,2.55e-17,29;UBERON:0004111,2.75e-13,122;UBERON:0000956,3.78e-13,21;UBERON:0001869,3.78e-13,21;UBERON:0000203,3.78e-13,21;UBERON:0000025,5.64e-13,114;UBERON:0002619,3.53e-11,17;UBERON:0002021,6.51e-08,10;UBERON:0000411,6.51e-08,10;UBERON:0001950,6.51e-08,10;UBERON:0003076,1.20e-07,12;UBERON:0003057,1.20e-07,12
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28937,5.67742665740062,6.47348862647139,9.09188012978695,9.16145796944104,6.09190374471426,4.97071450469541,2.25477175473676,4.03694674318743,3.80554528051325,6.80579159204167,6.71631082084202,6.08242051766801,6.45464812551647,6.90083239672936,3.46035836604846,2.89900944991207,2.88030006257865,4.4241556887945,3.85177909051312,3.59488350076895,4.54722880422283,3.75956060901711,4.76835251475036,5.52899067791857,5.90758108698309,4.64445669761479,6.47757856567499,6.957006774442,6.23730436734416,4.52195655709548,6.19447581562315,4.30787728868902,0.887943813496259,0.269141569828427,0.335769232728157,14.1028403643499,6.75656911624255,6.41030684935428,3.64426244434412,5.01572104035363,44.6153955667483,40.0482955761244,52.7063872364245,38.6669660273297,39.7347861466973,49.8559972277202,39.8263275136765,30.621841819247,25.3759749031155,35.7254615108756,3.52876981786201,3.19219898720825,6.14640980714883,6.80698807791223,7.96530017986333,10.6629234901008,6.44515510624684,8.03536723231687,7.70206103020357,9.34979683526051,6.33698249725599,7.54505365544305,7.11675456771106,8.64339557465735,8.55788487438638,5.23923060411381,10.429589335037,8.29509647993932,8.24171801606613,6.18235464564469,6.85738504770831,7.27650805253284,5.48403236878838,7.55801366488108,6.21121910741182,9.30760686808441,8.04883080640199,7.3659519202596,7.19761803383067,8.41713407486608,9.13489639556141,8.47138548429846,8.18462086339379,6.66228417099654,6.94463799532109,18.2361721894701,9.82512755470715,6.23126056740065,7.26895661861605,7.27951683094401,6.72416723299222
|phase1_expression=9.12848428497326,1.39590163055744,0.909998478779072,2.41971369045464,1.00179145989269,3.02182689441402,2.80335168714631,2.32421982194837,0.985521055061667,2.34064526321993,0.856089841127525,1.67521533890206,2.9104124088305,3.05971408466491,0.666219523631325,1.82227740650843,1.39912375625629,5.99378114180652,6.30726394586398,5.94145512517242,10.6304112688837,1.78723712161594,1.56719873483361,0.799962113967033,1.14704640533585,1.14846392823004,2.15380998079537,1.72376986148711,1.90023419456374,1.51218077855958,1.99557459589774,0.635030673459631,0.61506478758457,0,3.75507105676657,1.32987716286794,1.63335485009895,4.18531630736908,3.1253413780952,3.66466620781659,3.52938892818609,2.73218193983378,5.34061388334269,4.78407908307194,4.56196190487815,4.9557623083654,13.3006528539167,28.9973457985994,17.5748946187577,19.4429899074283,15.2585199571645,14.3752564364972,5.87239121202077,3.62681071005672,3.02484419228218,4.11615097657515,6.87680255853016,9.7977697532714,16.589949790487,21.1596391708813,19.0149421051854,6.09920157724438,4.4464739805557,5.84934816232909,1.97773272513395,7.8152812644071,10.7856039786626,13.4476406862544,17.0050964185903,17.1457541681247,15.3537221786509,28.5650984403804,26.283356373242,13.7189695120749,14.7602025368084,15.6267193723704,30.8324466798288,24.1329068981005,26.5739302533301,21.101806036831,22.8719109006024,22.3992749339407,17.0301629390842,15.1945904708554,17.4190002465564,29.4628585473668,26.7658759902314,25.5367240780662,3.71058347332602,2.87171928405785,8.98579914975201,3.44169550792555,1.3599426674155,0,1.29955283489534,1.34408066129201,4.21333260395256,3.57903677413921,4.1565760736459,3.88673531961374,9.85903938436764,6.41632387071589,7.64415719119937,0,1.29894624606728,0.760079596425296,1.51657333504435,2.62622923353838,2.07150306917737,5.49235914539852,3.64319186208885,4.26251669636998,7.14908041493781,6.93324146542064,6.23220147819235,6.03199638382442,2.22475470960936,6.65157041831594,2.65383165584962,8.7354098971601,4.85851340612866,4.363877278217,1.86391761218122,23.7152445579353,20.1068838540917,4.85368404896324,2.27648736561249,0,1.90605340609597,24.5656648623909,37.0575488283087,27.6439574648302,45.1943232499919,50.6316605514054,29.0903262383384,30.6635987198062,7.43427356107309,3.4833951770826,6.57079171927554,4.20883711772948,3.25301107406759,4.82794419310293,5.40186389416048,4.52114453507145,8.91278138882395,9.22418786050918,10.6819965998091,11.3829483125167,0.646703978798527,1.89106080167819,4.04687585577082,3.28793598641362,5.00485048606076,3.48252166522167,5.14455341019859,3.58261680273288,0.702213187313235,1.28673953557358,3.40996199274711,2.69263504296152,2.11073453982987,5.04173772090842,4.49814997611899,7.28027657465394,5.86215028972037,5.11574678450897,8.31647544338819,7.70651259623319,10.3672705445493,13.2975645904067,14.7545233373457,12.4269989311532,10.0993053033883,11.6759584321523,41.2168299185689,27.0639130557518,1.98251269790279,1.85115396664481,2.13288250535234,4.64473343720877,5.15469845288373,3.83198696784351,1.55664630691409,2.85338439168839,2.37264530772256,7.24675400785648,6.53471542880701,3.97912944082302,7.60359939764569,6.29173586057955,4.97117514711797,4.18196673834171,2.65535061334314,3.31320686568214,1.1270773567308,5.09128319613286,6.40043207653165,7.15385362881249,8.53693251177473,9.44704947069454,4.39596437955849,4.44229790118482,0.889357881261447,1.33476084572875,2.16214894624523,2.47348323623339,1.42002084971952,1.4470629585145,2.5462585178142,1.43848068725405,1.78348749452539,1.64736847912849,1.43768206527355,4.09355042435354,4.36852742360385,2.02063102357689,1.61457672169721,2.41221760681684,9.97667226899665,3.60033682363921,5.37784422258685,3.39490171550376,5.39787571063555,6.70025029767263,6.66522194480839,10.9274842800367,12.1379060961767,12.6234873099802,12.118562417969,11.1427054006702,11.569893785015,10.8486793936134,1.50791283939272,2.71952841909355,2.45882136509518,6.34654516500885,18.6238684385839,22.8562788854796,4.42624352517024,4.03953483526997,3.15508219416257,2.73307121007647,2.80050417052639,3.58453196928828,4.67877215573028,5.37845408498782,2.02405350837447,6.42962887404886,2.37172666767914,25.3843839973228,7.2389443456217,9.25941139069727,8.1443479676788,9.23832688646199,5.30980553359851,2.6705869977048,3.32555912661226,2.45186603682668,5.31543407185391,3.99665692327106,6.20227903603731,7.27067458955011,6.41695281092498,4.74055136903724,4.21674434299995,2.06271086496374,7.48967132658334,6.30213829109586,5.6917820864412,8.57348140126369,7.27094957933322,11.4156043265325,10.5311373185357,12.7875278628132,3.75474732901937,2.1183207086382,5.95426674748397,7.4198813823666,6.78150592122803,5.91066664295927,3.9392873521035,3.11867709515616,3.20628920292836,18.542530201051,2.05045056957423,7.42992724667601,3.51869602002452,2.82552685507037,2.7338845544205,1.83022538565218,3.73952545986482,3.91864066506242,4.00779924032829,2.86401185404534,3.16335993581135,5.69294507955176,5.07625101862466,4.18176592028937,5.67742665740062,6.47348862647139,9.09188012978695,9.16145796944104,6.09190374471426,4.97071450469541,2.25477175473676,4.03694674318743,3.80554528051325,6.80579159204167,6.71631082084202,6.08242051766801,6.45464812551647,6.90083239672936,3.46035836604846,2.89900944991207,2.88030006257865,4.4241556887945,3.85177909051312,3.59488350076895,4.54722880422283,3.75956060901711,4.76835251475036,5.52899067791857,5.90758108698309,4.64445669761479,6.47757856567499,6.957006774442,6.23730436734416,4.52195655709548,6.19447581562315,4.30787728868902,0.887943813496259,0.269141569828427,0.335769232728157,14.1028403643499,6.75656911624255,6.41030684935428,3.64426244434412,5.01572104035363,44.6153955667483,40.0482955761244,52.7063872364245,38.6669660273297,39.7347861466973,49.8559972277202,39.8263275136765,30.621841819247,25.3759749031155,35.7254615108756,3.52876981786201,3.19219898720825,6.14640980714883,6.80698807791223,7.96530017986333,10.6629234901008,6.44515510624684,8.03536723231687,7.70206103020357,9.34979683526051,6.33698249725599,7.54505365544305,7.11675456771106,8.64339557465735,8.55788487438638,5.23923060411381,10.429589335037,8.29509647993932,8.24171801606613,6.18235464564469,6.85738504770831,7.27650805253284,5.48403236878838,7.55801366488108,6.21121910741182,9.30760686808441,8.04883080640199,7.3659519202596,7.19761803383067,8.41713407486608,9.13489639556141,8.47138548429846,8.18462086339379,6.66228417099654,6.94463799532109,18.2361721894701,9.82512755470715,6.23126056740065,7.26895661861605,7.27951683094401,6.72416723299222
|short_description=p2@Gpd1l
|short_description=p2@Gpd1l
}}
}}

Latest revision as of 07:10, 26 September 2015

Short description:p2@Gpd1l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gpd1l_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000146623, NM_175380, uc009ryj.2, uc009ryk.2_5end
EntrezGene:Gpd1l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gpd1l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.32
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.68
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.06
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.99
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.31
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.56
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.96
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B713.30
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C229.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B817.57
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C319.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C415.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.80
Mouse Granule cells, donor1.CNhs12131.11713-123C316.59
Mouse Granule cells, donor2.CNhs12357.11731-123E321.16
Mouse Granule cells, donor3.CNhs12108.11636-122C719.01
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.10
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C810.79
Mouse Microglia, donor2.CNhs12634.11736-123E813.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D517.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F517.15
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D915.35
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F128.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.28
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D213.72
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.76
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D615.63
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D330.83
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D726.57
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D421.10
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F422.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D822.40
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.42
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D629.46
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F626.77
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E125.54
Mouse Schwann, donor1.CNhs12507.11728-123D93.71
Mouse Schwann, donor2.CNhs12573.11746-123F92.87
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.99
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.86
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D75.49
adrenal gland, embryo E14.CNhs11038.406-44C53.64
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I17.15
adrenal gland, embryo E18.CNhs11026.1262-18F56.93
adrenal gland, neonate N00.CNhs11191.1311-23C16.23
adrenal gland, neonate N25.CNhs11223.1377-27I36.03
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H16.65
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F58.74
bone (os femoris), neonate N16.CNhs11225.1525-43A64.86
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B223.72
cerebellum, neonate N30.CNhs11135.1395-42I220.11
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.28
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.91
corpora quadrigemina, adult.CNhs10501.16-22A424.57
corpus striatum, adult.CNhs10487.19-21D837.06
corpus striatum, neonate N00.CNhs11226.630-43F127.64
cortex, adult.CNhs10473.12-14D545.19
cortex, neonate N30.CNhs11107.1392-42F250.63
diencephalon, adult.CNhs10482.20-12F229.09
diencephalon, neonate N30.CNhs11201.1388-42B230.66
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.48
epididymis, adult.CNhs10490.58-23B26.57
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C63.25
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C95.40
eyeball, embryo E17.CNhs11023.1261-18D44.52
eyeball, neonate N00.CNhs11207.633-15C68.91
eyeball, neonate N01.CNhs11140.1532-43E79.22
eyeball, neonate N02.CNhs11205.1551-44G810.68
eyeball, neonate N16.CNhs11188.777-19A211.38
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E24.05
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B55.14
gonad, embryo E13.CNhs11044.1564-45I63.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I95.04
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C87.28
heart, embryo E16.CNhs11021.457-17C65.86
heart, embryo E17.CNhs11025.479-18E55.12
heart, embryo E18.CNhs11030.1283-20G38.32
heart, neonate N00.CNhs11213.639-21E37.71
heart, neonate N03.CNhs11221.1349-25I210.37
heart, neonate N10.CNhs11118.749-24G113.30
heart, neonate N16.CNhs11209.782-15G114.75
heart, neonate N20.CNhs11127.821-26I612.43
heart, neonate N25.CNhs11196.1351-25D310.10
heart, neonate N30.CNhs11202.1390-42D211.68
hippocampus, adult.CNhs10478.13-16E841.22
hippocampus, neonate N00.CNhs11228.627-43G127.06
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D54.64
intestine, embryo E15.CNhs10602.976-16D85.15
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E97.25
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F23.98
intestine, neonate N10.CNhs11098.755-23A57.60
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E34.97
intestine, neonate N30.CNhs11131.1384-42G14.18
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F83.31
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I25.09
kidney, embryo E18.CNhs11001.1288-20C76.40
kidney, neonate N00.CNhs11214.646-21G77.15
kidney, neonate N10.CNhs11206.758-6D58.54
kidney, neonate N20.CNhs11113.832-19I19.45
kidney, neonate N25.CNhs11122.1353-25F34.40
kidney, neonate N30.CNhs11203.1385-42H14.44
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B19.98
lung, embryo E12.CNhs10522.354-16G23.60
lung, embryo E14.CNhs10604.404-26F85.38
lung, embryo E15.CNhs11020.432-17C53.39
lung, embryo E16.CNhs10998.458-17B65.40
lung, embryo E17.CNhs10605.480-44A66.70
lung, embryo E18.CNhs10583.1287-20I66.67
lung, neonate N00.CNhs11224.640-42C610.93
lung, neonate N06.CNhs11212.683-20E512.14
lung, neonate N07.CNhs11111.715-19A312.62
lung, neonate N10.CNhs11219.750-23E612.12
lung, neonate N20.CNhs11109.822-18A411.14
lung, neonate N25.CNhs11119.1359-25C711.57
lung, neonate N30.CNhs11133.1394-42H210.85
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C218.62
medulla oblongata, neonate N30.CNhs11200.1396-42A322.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.43
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.04
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.43
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I925.38
ovary, adult.CNhs10507.91-2I77.24
ovary, embryo E18.CNhs11040.505-44H79.26
ovary, neonate N00.CNhs11217.1299-22I48.14
oviduct, adult pregnant day01.CNhs10500.988-6G69.24
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D77.27
pancreas, neonate N02.CNhs11139.1539-43D86.42
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G87.49
pituitary gland, embryo E12.CNhs11018.346-16E66.30
pituitary gland, embryo E13.CNhs11009.370-44C75.69
pituitary gland, embryo E14.CNhs11037.398-44A58.57
pituitary gland, embryo E15.CNhs10592.427-16B97.27
pituitary gland, embryo E16.CNhs11036.449-43F611.42
pituitary gland, embryo E17.CNhs11039.1265-44F510.53
pituitary gland, neonate N00.CNhs11190.1308-22E912.79
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F85.95
skin, adult.CNhs10492.30-1C37.42
skin, neonate N00.CNhs11124.650-25G46.78
skin, neonate N03.CNhs11215.662-22H35.91
skin, neonate N06.CNhs11097.693-20I53.94
skin, neonate N10.CNhs11108.762-6C43.12
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C918.54
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C17.43
spleen, embryo E18.CNhs11011.1271-21F23.52
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H12.73
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.01
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G85.69
stomach, embryo E16.CNhs11022.459-17D45.08
stomach, embryo E17.CNhs11006.1035-18D54.18
stomach, embryo E18.CNhs10999.1286-20C65.68
stomach, neonate N03.CNhs11193.1340-24B86.47
stomach, neonate N07.CNhs11210.718-18A99.09
stomach, neonate N25.CNhs11104.1355-25E49.16
stomach, neonate N30.CNhs11134.1386-42I16.09
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F54.04
testis, embryo E15.CNhs11034.443-27C53.81
testis, embryo E16.CNhs11033.470-26G56.81
testis, embryo E17.CNhs11029.486-18I56.72
testis, embryo E18.CNhs11027.503-18G56.08
testis, neonate N00.CNhs11189.1300-22B76.45
testis, neonate N07.CNhs11222.726-26I46.90
testis, neonate N10.CNhs11204.763-44D93.46
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I43.85
thymus, embryo E15.CNhs11005.430-45I23.59
thymus, embryo E16.CNhs11002.456-26C54.55
thymus, embryo E17.CNhs10581.478-18C13.76
thymus, embryo E18.CNhs10595.1273-19G44.77
thymus, neonate N02.CNhs11181.1541-43F85.53
thymus, neonate N03.CNhs11137.2104-43C75.91
thymus, neonate N06.CNhs11197.681-26C44.64
thymus, neonate N07.CNhs11211.713-19D36.48
thymus, neonate N10.CNhs11194.748-24E46.96
thymus, neonate N20.CNhs11186.820-7A26.24
thymus, neonate N25.CNhs11125.1362-25G74.52
thymus, neonate N30.CNhs11132.1393-42G26.19
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E414.10
uterus, adult pregnant day19.CNhs10497.590-15F56.76
uterus, adult.CNhs10509.92-27E56.41
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A144.62
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A240.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A352.71
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D738.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A439.73
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A549.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A639.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A730.62
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A825.38
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A935.73
whole body, embryo E11.CNhs11014.324-5I83.53
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H26.15
whole body, embryo E14.5.CNhs10578.420-27D26.81
whole body, embryo E14.CNhs10519.395-14B17.97
whole body, embryo E16.CNhs10514.453-14F210.66
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.04
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.34
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.55
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.56
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.28
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.31
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.05
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.47
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.66
whole body, embryo E17.5.CNhs10513.490-9F96.94
whole body, embryo E17.CNhs10517.475-3I518.24
whole body, embryo E18.CNhs10516.493-3B39.83
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C67.27
whole body, neonate N06.CNhs10515.692-21D17.28
whole body, neonate N10.CNhs10518.761-6B46.72





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.27e-1223
neuroblast (sensu Vertebrata)1.27e-1223
ectodermal cell6.16e-1044
neurectodermal cell6.16e-1044
neural cell1.16e-0943
neuron1.77e-0733
neuronal stem cell1.77e-0733
neuroblast1.77e-0733
electrically signaling cell1.77e-0733
electrically responsive cell7.44e-0739
electrically active cell7.44e-0739

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.42e-2854
central nervous system6.92e-2773
neural tube6.98e-2752
neural rod6.98e-2752
future spinal cord6.98e-2752
neural keel6.98e-2752
nervous system1.64e-2575
brain1.16e-2347
future brain1.16e-2347
regional part of brain4.82e-2346
neurectoderm7.84e-2364
neural plate7.84e-2364
presumptive neural plate7.84e-2364
structure with developmental contribution from neural crest1.67e-2292
ectoderm-derived structure2.41e-2295
ectoderm2.41e-2295
presumptive ectoderm2.41e-2295
ecto-epithelium2.32e-2173
gray matter2.06e-2034
anterior neural tube9.90e-2040
regional part of forebrain3.81e-1939
forebrain3.81e-1939
future forebrain3.81e-1939
pre-chordal neural plate3.01e-1849
brain grey matter2.55e-1729
regional part of telencephalon2.55e-1729
telencephalon2.55e-1729
anatomical conduit2.75e-13122
cerebral cortex3.78e-1321
cerebral hemisphere3.78e-1321
pallium3.78e-1321
tube5.64e-13114
regional part of cerebral cortex3.53e-1117
occipital lobe6.51e-0810
visual cortex6.51e-0810
neocortex6.51e-0810
posterior neural tube1.20e-0712
chordal neural plate1.20e-0712
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