FFCP PHASE1:Mm9::chr7:105327399..105327404,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=566 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:105327399..105327404,- | |||
|description=CAGE_peak_at_chr7:105327399..105327404,- | |description=CAGE_peak_at_chr7:105327399..105327404,- | ||
|id=chr7:105327399..105327404,- | |id=chr7:105327399..105327404,- | ||
|ontology_enrichment_celltype=CL:0000239!1.03e-08!6;CL:0000677!1.03e-08!6;CL:0000212!1.03e-08!6;CL:0000584!1.03e-08!6;CL:0002076!2.41e-08!15;CL:0000068!4.45e-08!3;CL:0002202!4.45e-08!3;CL:0000069!4.45e-08!3;CL:0002632!4.45e-08!3;CL:0002368!4.45e-08!3;CL:0000307!4.45e-08!3;CL:0000377!4.45e-08!3;CL:0000075!2.08e-07!7;CL:0000223!2.28e-07!20;CL:0000066!6.94e-07!25 | |ontology_enrichment_celltype=CL:0000239!1.03e-08!6;CL:0000677!1.03e-08!6;CL:0000212!1.03e-08!6;CL:0000584!1.03e-08!6;CL:0002076!2.41e-08!15;CL:0000068!4.45e-08!3;CL:0002202!4.45e-08!3;CL:0000069!4.45e-08!3;CL:0002632!4.45e-08!3;CL:0002368!4.45e-08!3;CL:0000307!4.45e-08!3;CL:0000377!4.45e-08!3;CL:0000075!2.08e-07!7;CL:0000223!2.28e-07!20;CL:0000066!6.94e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,7.14e-30,3;CL:0002202,7.14e-30,3;CL:0000069,7.14e-30,3;CL:0002632,7.14e-30,3;CL:0002368,7.14e-30,3;CL:0000307,7.14e-30,3;CL:0000377,7.14e-30,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003126!4.45e-08!3;UBERON:0001005!4.45e-08!3;UBERON:0007196!4.45e-08!3;UBERON:0001558!4.45e-08!3;UBERON:0004122!1.03e-07!5;UBERON:0000162!1.36e-07!3;UBERON:0001353!1.36e-07!3;UBERON:0000163!1.36e-07!3;UBERON:0006866!1.36e-07!3;UBERON:0001046!1.36e-07!3;UBERON:0000164!1.36e-07!3;UBERON:0000931!1.36e-07!3;UBERON:0001008!7.20e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,7.14e-30,3;UBERON:0001005,7.14e-30,3;UBERON:0007196,7.14e-30,3;UBERON:0001558,7.14e-30,3;UBERON:0004175,1.04e-17,9;UBERON:0001301,5.73e-14,3;UBERON:0006555,5.73e-14,3;UBERON:0005103,5.73e-14,3;UBERON:0000083,5.73e-14,3;UBERON:0009201,5.73e-14,3;UBERON:0004819,5.73e-14,3;UBERON:0006553,5.73e-14,3;UBERON:0003074,5.73e-14,3;UBERON:0003060,5.73e-14,3;UBERON:0001153,4.58e-11,1;UBERON:0001045,4.58e-11,1;UBERON:0000080,1.01e-10,4;UBERON:0005904,1.01e-10,4;UBERON:0006947,1.01e-10,4;UBERON:0002120,1.01e-10,4;UBERON:0004054,1.01e-10,4;UBERON:0004875,1.01e-10,4;UBERON:0004876,1.01e-10,4;UBERON:0005721,1.01e-10,4;UBERON:0005754,1.01e-10,4;UBERON:0007297,1.01e-10,4;UBERON:0000996,1.12e-10,1;UBERON:0003975,9.20e-09,5;UBERON:0004122,1.71e-08,5;UBERON:0003133,7.24e-07,24;UBERON:0003064,8.06e-07,14 | |||
|phase1_expression=0,0.697950815278722,0.454999239389536,0.30246421130683,0.500895729946347,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226714680320357,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,1.73192832808971,2.02687892380079,2.02209778005913,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24406970610093,6.31806896084187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0.147610147979602,0,0,0,0.333690211432188,0,0.674586337154561,0.202860121388503,0,0,0,0,0.549122826376163,0,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0.8244312647074,0,0,0.716234064018819,1.80554989719567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0.523511883968059,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0.750729901804728,8.05867146775966,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.697950815278722,0.454999239389536,0.30246421130683,0.500895729946347,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226714680320357,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,1.73192832808971,2.02687892380079,2.02209778005913,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24406970610093,6.31806896084187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0.147610147979602,0,0,0,0.333690211432188,0,0.674586337154561,0.202860121388503,0,0,0,0,0.549122826376163,0,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661585194164886,0.8244312647074,0,0,0.716234064018819,1.80554989719567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0.523511883968059,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0.750729901804728,8.05867146775966,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:105327399..105327404,- | |short_description=p@chr7:105327399..105327404,- | ||
}} | }} |
Latest revision as of 20:12, 3 August 2015
Short description: | p@chr7:105327399..105327404, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:105327399..105327404, - |
Coexpression cluster: | MCL_coexpression_mm9:566 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 7.14e-30 | 3 |
epithelial cell of tracheobronchial tree | 7.14e-30 | 3 |
branched duct epithelial cell | 7.14e-30 | 3 |
epithelial cell of lower respiratory tract | 7.14e-30 | 3 |
respiratory epithelial cell | 7.14e-30 | 3 |
tracheal epithelial cell | 7.14e-30 | 3 |
tracheoblast | 7.14e-30 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 7.14e-30 | 3 |
respiratory airway | 7.14e-30 | 3 |
tracheobronchial tree | 7.14e-30 | 3 |
lower respiratory tract | 7.14e-30 | 3 |
internal genitalia | 1.04e-17 | 9 |
epididymis | 5.73e-14 | 3 |
excretory tube | 5.73e-14 | 3 |
mesonephric epithelium | 5.73e-14 | 3 |
mesonephric tubule | 5.73e-14 | 3 |
nephric duct | 5.73e-14 | 3 |
kidney epithelium | 5.73e-14 | 3 |
renal duct | 5.73e-14 | 3 |
mesonephric duct | 5.73e-14 | 3 |
pronephric duct | 5.73e-14 | 3 |
caecum | 4.58e-11 | 1 |
midgut | 4.58e-11 | 1 |
mesonephros | 1.01e-10 | 4 |
duct of male reproductive system | 1.01e-10 | 4 |
male genital duct | 1.01e-10 | 4 |
pronephros | 1.01e-10 | 4 |
internal male genitalia | 1.01e-10 | 4 |
nephrogenic cord | 1.01e-10 | 4 |
urogenital ridge | 1.01e-10 | 4 |
pronephric mesoderm | 1.01e-10 | 4 |
rostral part of nephrogenic cord | 1.01e-10 | 4 |
presumptive pronephric mesoderm | 1.01e-10 | 4 |
vagina | 1.12e-10 | 1 |
internal female genitalia | 9.20e-09 | 5 |
genitourinary system | 1.71e-08 | 5 |
reproductive organ | 7.24e-07 | 24 |
intermediate mesoderm | 8.06e-07 | 14 |