Personal tools

FFCP PHASE1:Mm9::chr9:107457016..107457094,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:107457016..107457094,+
|short_description=p1@Rassf1
|description=CAGE_peak_1_at_Rassf1_5end
|association_with_transcript=29bp_to_ENSMUST00000010211,uc009rlq.1_5end
|EntrezGene=56289
|EntrezGene=56289
|HGNC=
|HGNC=
|UniProt=Q99MK9,B0QZV8
|UniProt=Q99MK9,B0QZV8
|association_with_transcript=29bp_to_ENSMUST00000010211,uc009rlq.1_5end
|description=CAGE_peak_1_at_Rassf1_5end
|id=chr9:107457016..107457094,+
|ontology_enrichment_disease=
|phase1_expression=16.9757777931082,20.2405736430829,21.8399634906977,27.2217790176147,28.0501608769954,17.2915650069246,14.2503710763271,11.2337291394171,47.8681655315667,36.045937053587,26.1963491385023,19.8632675898388,17.6336751829142,12.0640155338216,11.6588416635482,13.1608923803387,16.0899231969474,19.7163853348899,16.7279608999001,29.7072756258621,17.5189177711204,8.43973085207525,9.92559198727954,10.8794847499517,12.15869189656,22.9692785646008,14.2151458732495,15.2984575206981,11.4014051673824,11.089325709437,11.0865255327652,14.6057054895715,12.3012957516914,0,12.7094712690561,10.9714865936605,14.0876855821035,8.78916424547506,19.533383613095,8.89990364755457,11.1763982725893,8.87959130445979,12.1377588257788,12.8414754335089,12.1652317463417,13.2153661556411,8.60630478782843,6.97680500417429,13.8402295122717,20.609569301874,14.1386285841616,10.062679505548,34.8987820600092,25.3876749703971,27.559691529682,22.8960898071993,15.4728057566929,24.2365883370398,11.3297218081375,13.2247744818008,17.1134478946668,13.2149367506962,9.78224275722253,19.3478439215501,15.8218618010716,13.4991221839759,9.58720353658895,4.99483796918021,5.49554945234932,6.88530285491622,5.04779907243317,5.42736870367227,11.4851641294839,6.73699395682247,6.99671938433125,11.9498442259303,7.70811166995721,6.38436690425939,8.29475279583715,11.4741070325269,12.6252948171325,6.77187381723788,9.49222196604695,12.9435400307286,7.48711414106369,12.0797720044204,12.1015928679237,7.82877672466262,78.0737053265128,17.6837450649878,29.5661778475711,12.0459342777394,21.0791113449403,4.85732872474035,1.94932925234301,1.79210754838934,6.88177658645584,8.862376774059,10.6512261887176,14.8402621294343,9.57735254481427,15.3991772897181,20.3844191765317,14.2213340630666,25.329451798312,26.0960661439352,29.8259422558722,7.4219521817389,11.3932668804756,8.16431764856536,8.67426633830679,5.1759131313064,5.07354093963329,9.49552635481522,8.70156432804216,5.78066320116507,18.2924276123437,8.09756398751505,11.4999371753484,9.54424414689714,6.8460870722722,12.1218813283806,5.59175283654366,10.5401086924157,13.1951425292477,11.7510245395952,24.2026551501959,33.5945529356308,30.6239247246086,7.33974133083631,8.23501085073528,14.7015591972051,6.77914848749878,7.92717917724025,4.36354893575076,6.97637431191358,12.7299204812895,10.4501855312478,9.35074206204597,3.99839526184301,8.19758790665033,12.1848115349741,10.0834792690996,12.2070902446929,12.7228253412983,14.9893052733274,12.5560310910037,5.43277078551933,6.46703978798527,7.56424320671277,7.9178005873777,10.9597866213787,10.2877482213471,10.0993128291428,10.906453229621,7.96137067273973,45.6438571753603,30.8817488537658,25.2905514462077,8.49215667395558,10.3191466391682,10.8037236876609,9.46978942340841,10.231740050865,9.56456099901745,8.8362899005155,13.1453966685813,12.6106569756543,10.2027106946358,11.984224877774,8.51222500231485,11.6959989940266,7.02560368931362,12.8838162009957,7.99101804543684,11.1136981369627,14.2080076683033,8.99131926656051,5.75878276445132,9.75394021813842,9.02072229254653,7.05892336181699,8.00560957841533,8.94060442729028,11.3886974770683,15.152303834609,15.0801125280162,14.9217354030863,15.2071987952914,6.29173586057955,11.2391785934841,12.3467589417708,7.2073802362171,7.76889885746156,10.1436962105772,6.10953983535943,7.75809948670503,8.48643420672855,6.57659986092276,7.67572769493931,3.1399745568275,6.66344685177723,5.03969466048153,5.6727335943472,6.6830058338489,8.7696223830093,5.47722327748958,7.23531479257251,6.62027214631691,7.76779571117189,7.29608520487659,8.51140380883053,11.5014565221884,4.09355042435354,6.55279113540577,5.05157755894223,2.69096120282868,4.3419916922703,14.041242452662,8.33762211790133,8.96307370431142,8.65699937453459,9.15291968325158,10.5528942188344,10.4739201989846,23.6111713907937,16.8669604193624,17.9386398615508,17.8589340896386,19.0081445070256,11.9152637487468,17.6471851469444,22.6186925908908,28.2830955585729,11.8023425524569,7.45029215022778,7.06422595946285,5.62616095642575,5.24591825205361,10.856249869788,9.14973836307144,11.3227235846025,8.40151251157916,9.31978312014953,11.3627323782021,11.0399847007645,10.5250782435473,10.2289550268959,11.4633455604492,10.6036034419196,9.9358059645788,9.61554259803178,9.61033060186099,9.07335676348945,7.96470830039777,6.31229654002952,6.34879469625977,8.67583366877131,12.4026795009925,10.7602301780375,16.5394107627662,9.45187696641514,8.55593708123331,7.58488219045958,6.32511651449993,5.15677716240934,10.5536277783674,6.84232157318979,10.4780533864031,11.3598628566744,8.15765074754458,8.56170324489939,9.70839221552514,11.8741330154694,10.7948985709307,15.2519091021951,12.3495902910779,9.8931751764888,10.333723308538,10.5547618624273,12.4147237763262,11.6540038818993,14.5740418314925,4.82105785227325,9.22702756308404,11.144890870014,12.4080333337707,11.6788443342908,8.20165366326151,9.37990510146743,12.4084253895514,20.0130576822831,17.274996725553,8.59203556213602,7.11755985557555,10.1659733563424,9.07244862903131,8.36353184057875,10.2630404960703,9.97996163247673,9.09188012978695,8.63794608547298,9.46189305030088,6.83473244395618,71.025310274208,4.63501292736334,9.10021697514037,9.91701060554643,7.62042958518613,10.3063236549375,7.62822051197401,9.37471570876441,8.80818493175971,47.5920718027232,42.916470932422,11.3764003426144,6.89265731986558,9.75754093065859,8.44485349355668,9.667441566044,8.74197961037565,9.49544051207754,9.00906115764921,12.2169404437259,11.43102099825,13.4098826231998,14.2288505880039,12.7961749381638,15.193997283604,7.02864189207155,6.88156455459601,5.74168682300644,12.75923084367,11.3981860478992,10.322536149815,14.4689783171139,8.36036678408357,10.5330141847426,9.60078132449013,12.4287813856938,8.02053718815155,9.45192502890282,10.9613203163303,4.5323633843382,6.75022500231806,9.90706647093285,8.60970577069989,14.497288729051,8.09541311156578,10.3746467084268,10.4147499510022,8.99494853152688,7.96530017986333,11.2144540154509,8.44537565646138,10.7138229764225,5.45562656306086,11.8767689528985,9.88569269571935,13.5810965797975,9.45779225445812,9.02754648908657,8.50044940543076,10.9547548995107,11.240779616651,12.1532808892134,9.89006161927936,11.0399190100798,9.25746981440622,9.22874192028555,8.58370283810355,8.86613141457204,9.88148494360971,10.3229821627845,10.9756783723664,9.99664903463803,9.91370031074791,10.1005608898393,10.3212465768031,11.4265199555654,10.2307760792422,9.14127362997199,9.06661071611365,11.2414760072076,8.4215379040347,12.0327790267047,11.6685882561994,12.3531194706929,9.27471342481686
|phase1_expression=16.9757777931082,20.2405736430829,21.8399634906977,27.2217790176147,28.0501608769954,17.2915650069246,14.2503710763271,11.2337291394171,47.8681655315667,36.045937053587,26.1963491385023,19.8632675898388,17.6336751829142,12.0640155338216,11.6588416635482,13.1608923803387,16.0899231969474,19.7163853348899,16.7279608999001,29.7072756258621,17.5189177711204,8.43973085207525,9.92559198727954,10.8794847499517,12.15869189656,22.9692785646008,14.2151458732495,15.2984575206981,11.4014051673824,11.089325709437,11.0865255327652,14.6057054895715,12.3012957516914,0,12.7094712690561,10.9714865936605,14.0876855821035,8.78916424547506,19.533383613095,8.89990364755457,11.1763982725893,8.87959130445979,12.1377588257788,12.8414754335089,12.1652317463417,13.2153661556411,8.60630478782843,6.97680500417429,13.8402295122717,20.609569301874,14.1386285841616,10.062679505548,34.8987820600092,25.3876749703971,27.559691529682,22.8960898071993,15.4728057566929,24.2365883370398,11.3297218081375,13.2247744818008,17.1134478946668,13.2149367506962,9.78224275722253,19.3478439215501,15.8218618010716,13.4991221839759,9.58720353658895,4.99483796918021,5.49554945234932,6.88530285491622,5.04779907243317,5.42736870367227,11.4851641294839,6.73699395682247,6.99671938433125,11.9498442259303,7.70811166995721,6.38436690425939,8.29475279583715,11.4741070325269,12.6252948171325,6.77187381723788,9.49222196604695,12.9435400307286,7.48711414106369,12.0797720044204,12.1015928679237,7.82877672466262,78.0737053265128,17.6837450649878,29.5661778475711,12.0459342777394,21.0791113449403,4.85732872474035,1.94932925234301,1.79210754838934,6.88177658645584,8.862376774059,10.6512261887176,14.8402621294343,9.57735254481427,15.3991772897181,20.3844191765317,14.2213340630666,25.329451798312,26.0960661439352,29.8259422558722,7.4219521817389,11.3932668804756,8.16431764856536,8.67426633830679,5.1759131313064,5.07354093963329,9.49552635481522,8.70156432804216,5.78066320116507,18.2924276123437,8.09756398751505,11.4999371753484,9.54424414689714,6.8460870722722,12.1218813283806,5.59175283654366,10.5401086924157,13.1951425292477,11.7510245395952,24.2026551501959,33.5945529356308,30.6239247246086,7.33974133083631,8.23501085073528,14.7015591972051,6.77914848749878,7.92717917724025,4.36354893575076,6.97637431191358,12.7299204812895,10.4501855312478,9.35074206204597,3.99839526184301,8.19758790665033,12.1848115349741,10.0834792690996,12.2070902446929,12.7228253412983,14.9893052733274,12.5560310910037,5.43277078551933,6.46703978798527,7.56424320671277,7.9178005873777,10.9597866213787,10.2877482213471,10.0993128291428,10.906453229621,7.96137067273973,45.6438571753603,30.8817488537658,25.2905514462077,8.49215667395558,10.3191466391682,10.8037236876609,9.46978942340841,10.231740050865,9.56456099901745,8.8362899005155,13.1453966685813,12.6106569756543,10.2027106946358,11.984224877774,8.51222500231485,11.6959989940266,7.02560368931362,12.8838162009957,7.99101804543684,11.1136981369627,14.2080076683033,8.99131926656051,5.75878276445132,9.75394021813842,9.02072229254653,7.05892336181699,8.00560957841533,8.94060442729028,11.3886974770683,15.152303834609,15.0801125280162,14.9217354030863,15.2071987952914,6.29173586057955,11.2391785934841,12.3467589417708,7.2073802362171,7.76889885746156,10.1436962105772,6.10953983535943,7.75809948670503,8.48643420672855,6.57659986092276,7.67572769493931,3.1399745568275,6.66344685177723,5.03969466048153,5.6727335943472,6.6830058338489,8.7696223830093,5.47722327748958,7.23531479257251,6.62027214631691,7.76779571117189,7.29608520487659,8.51140380883053,11.5014565221884,4.09355042435354,6.55279113540577,5.05157755894223,2.69096120282868,4.3419916922703,14.041242452662,8.33762211790133,8.96307370431142,8.65699937453459,9.15291968325158,10.5528942188344,10.4739201989846,23.6111713907937,16.8669604193624,17.9386398615508,17.8589340896386,19.0081445070256,11.9152637487468,17.6471851469444,22.6186925908908,28.2830955585729,11.8023425524569,7.45029215022778,7.06422595946285,5.62616095642575,5.24591825205361,10.856249869788,9.14973836307144,11.3227235846025,8.40151251157916,9.31978312014953,11.3627323782021,11.0399847007645,10.5250782435473,10.2289550268959,11.4633455604492,10.6036034419196,9.9358059645788,9.61554259803178,9.61033060186099,9.07335676348945,7.96470830039777,6.31229654002952,6.34879469625977,8.67583366877131,12.4026795009925,10.7602301780375,16.5394107627662,9.45187696641514,8.55593708123331,7.58488219045958,6.32511651449993,5.15677716240934,10.5536277783674,6.84232157318979,10.4780533864031,11.3598628566744,8.15765074754458,8.56170324489939,9.70839221552514,11.8741330154694,10.7948985709307,15.2519091021951,12.3495902910779,9.8931751764888,10.333723308538,10.5547618624273,12.4147237763262,11.6540038818993,14.5740418314925,4.82105785227325,9.22702756308404,11.144890870014,12.4080333337707,11.6788443342908,8.20165366326151,9.37990510146743,12.4084253895514,20.0130576822831,17.274996725553,8.59203556213602,7.11755985557555,10.1659733563424,9.07244862903131,8.36353184057875,10.2630404960703,9.97996163247673,9.09188012978695,8.63794608547298,9.46189305030088,6.83473244395618,71.025310274208,4.63501292736334,9.10021697514037,9.91701060554643,7.62042958518613,10.3063236549375,7.62822051197401,9.37471570876441,8.80818493175971,47.5920718027232,42.916470932422,11.3764003426144,6.89265731986558,9.75754093065859,8.44485349355668,9.667441566044,8.74197961037565,9.49544051207754,9.00906115764921,12.2169404437259,11.43102099825,13.4098826231998,14.2288505880039,12.7961749381638,15.193997283604,7.02864189207155,6.88156455459601,5.74168682300644,12.75923084367,11.3981860478992,10.322536149815,14.4689783171139,8.36036678408357,10.5330141847426,9.60078132449013,12.4287813856938,8.02053718815155,9.45192502890282,10.9613203163303,4.5323633843382,6.75022500231806,9.90706647093285,8.60970577069989,14.497288729051,8.09541311156578,10.3746467084268,10.4147499510022,8.99494853152688,7.96530017986333,11.2144540154509,8.44537565646138,10.7138229764225,5.45562656306086,11.8767689528985,9.88569269571935,13.5810965797975,9.45779225445812,9.02754648908657,8.50044940543076,10.9547548995107,11.240779616651,12.1532808892134,9.89006161927936,11.0399190100798,9.25746981440622,9.22874192028555,8.58370283810355,8.86613141457204,9.88148494360971,10.3229821627845,10.9756783723664,9.99664903463803,9.91370031074791,10.1005608898393,10.3212465768031,11.4265199555654,10.2307760792422,9.14127362997199,9.06661071611365,11.2414760072076,8.4215379040347,12.0327790267047,11.6685882561994,12.3531194706929,9.27471342481686
|short_description=p1@Rassf1
}}
}}

Revision as of 02:02, 19 April 2012

Short description:p1@Rassf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rassf1_5end
Coexpression cluster:NA
Association with transcript: 29bp_to_ENSMUST00000010211, uc009rlq.1_5end
EntrezGene:Rassf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rassf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I520.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I621.84
CD326+ enterocyte, pool1.CNhs13542.11848-124I327.22
CD326+ enterocyte, pool2.CNhs13197.11849-124I428.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I717.29
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.25
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E911.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E747.87
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F236.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E626.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F119.86
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E417.63
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.06
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.16
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A516.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A219.72
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A416.73
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A629.71
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.93
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D110.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.16
GP2+ M cell, pool1.CNhs13228.11845-124H922.97
GP2+ M cell, pool2.CNhs13231.11846-124I114.22
GP2+ M cell, pool3.CNhs13240.11847-124I215.30
Ileum epithelium, pool1.CNhs13199.10252-104B911.40
Ileum epithelium, pool2.CNhs13232.10253-104C111.09
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.09
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I314.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.71
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F610.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F714.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H119.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.90
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H412.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D812.84
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.17
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.98
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B813.84
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C320.61
Mouse Astrocytes, donor2.CNhs12078.11552-120C414.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A234.90
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I925.39
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A127.56
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C122.90
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E115.47
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C524.24
Mouse Granule cells, donor1.CNhs12131.11713-123C311.33
Mouse Granule cells, donor2.CNhs12357.11731-123E313.22
Mouse Granule cells, donor3.CNhs12108.11636-122C717.11
Mouse Meningeal cells, donor1.CNhs12132.11716-123C613.21
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C719.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E715.82
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D213.50
Mouse Microglia, donor1.CNhs12629.11718-123C89.59
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.49
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.74
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.47
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.63
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.10
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.83
Mouse Schwann, donor1.CNhs12507.11728-123D978.07
Mouse Schwann, donor2.CNhs12573.11746-123F917.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G329.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.05
Mouse hepatocyte, donor1.CNhs13078.11714-123C421.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I814.84
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G125.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G226.10
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G329.83
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.42
accessory axillary lymph node, adult.CNhs10475.1063-29H911.39
adrenal gland, adult.CNhs10508.49-24D78.16
adrenal gland, embryo E14.CNhs11038.406-44C58.67
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I15.07
adrenal gland, embryo E18.CNhs11026.1262-18F59.50
adrenal gland, neonate N00.CNhs11191.1311-23C18.70
adrenal gland, neonate N25.CNhs11223.1377-27I35.78
amnion, adult pregnant day17.5.CNhs10488.583-22A818.29
aorta, adult.CNhs10498.46-23H18.10
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F59.54
bone (os femoris), neonate N16.CNhs11225.1525-43A66.85
bone (os femoris), neonate N20.CNhs11195.1350-25C312.12
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B210.54
cerebellum, neonate N30.CNhs11135.1395-42I213.20
colon, adult.CNhs10468.36-18H711.75
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C724.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D133.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D430.62
corpora quadrigemina, adult.CNhs10501.16-22A47.34
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F114.70
cortex, adult.CNhs10473.12-14D56.78
cortex, neonate N30.CNhs11107.1392-42F27.93
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B26.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.45
epididymis, adult.CNhs10490.58-23B29.35
eyeball, adult.CNhs10484.31-12G44.00
eyeball, embryo E12.CNhs11016.345-16C68.20
eyeball, embryo E14.CNhs10521.399-16E212.18
eyeball, embryo E15.CNhs10593.426-16C910.08
eyeball, embryo E17.CNhs11023.1261-18D412.21
eyeball, neonate N00.CNhs11207.633-15C612.72
eyeball, neonate N01.CNhs11140.1532-43E714.99
eyeball, neonate N02.CNhs11205.1551-44G812.56
eyeball, neonate N16.CNhs11188.777-19A25.43
forelimb, embryo E11.CNhs10596.335-25E26.47
forelimb, embryo E12.CNhs10600.359-14H27.56
forelimb, embryo E13.CNhs10589.384-1E27.92
forelimb, embryo E14.CNhs10577.413-26A810.96
forelimb, embryo E15.CNhs11007.437-20E710.29
forelimb, embryo E17.CNhs10598.1517-43C410.10
forelimb, embryo E18.CNhs11008.1520-43B510.91
gonad, embryo E13.CNhs11044.1564-45I67.96
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C845.64
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D230.88
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D525.29
heart, embryo E11.CNhs10586.331-24E98.49
heart, embryo E12.CNhs11015.353-12F510.32
heart, embryo E13.CNhs11013.376-3I910.80
heart, embryo E14.CNhs10597.403-26D49.47
heart, embryo E15.CNhs11017.431-16C810.23
heart, embryo E16.CNhs11021.457-17C69.56
heart, embryo E17.CNhs11025.479-18E58.84
heart, embryo E18.CNhs11030.1283-20G313.15
heart, neonate N00.CNhs11213.639-21E312.61
heart, neonate N03.CNhs11221.1349-25I210.20
heart, neonate N10.CNhs11118.749-24G111.98
heart, neonate N16.CNhs11209.782-15G18.51
heart, neonate N20.CNhs11127.821-26I611.70
heart, neonate N25.CNhs11196.1351-25D37.03
heart, neonate N30.CNhs11202.1390-42D212.88
hippocampus, adult.CNhs10478.13-16E87.99
hippocampus, neonate N00.CNhs11228.627-43G111.11
intestinal mucosa, adult.CNhs10506.860-29I314.21
intestine, adult.CNhs10496.178-9A38.99
intestine, embryo E12.CNhs11019.1251-16I55.76
intestine, embryo E13.CNhs11010.381-16D59.75
intestine, embryo E15.CNhs10602.976-16D89.02
intestine, embryo E16.CNhs10585.463-22H47.06
intestine, embryo E17.CNhs10582.482-18D38.01
intestine, embryo E18.CNhs10526.1289-20F78.94
intestine, neonate N00.CNhs11126.644-26D111.39
intestine, neonate N01.CNhs11192.1322-23E915.15
intestine, neonate N06.CNhs11102.688-20B815.08
intestine, neonate N07.CNhs11095.720-20F214.92
intestine, neonate N10.CNhs11098.755-23A515.21
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E311.24
intestine, neonate N30.CNhs11131.1384-42G112.35
kidney, embryo E14.CNhs10606.411-4I97.21
kidney, embryo E15.CNhs10997.434-16F87.77
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I26.11
kidney, embryo E18.CNhs11001.1288-20C77.76
kidney, neonate N00.CNhs11214.646-21G78.49
kidney, neonate N10.CNhs11206.758-6D56.58
kidney, neonate N20.CNhs11113.832-19I17.68
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H16.66
liver, adult pregnant day01.CNhs10466.508-5B25.04
liver, embryo E12.CNhs10601.355-15F85.67
liver, embryo E13.CNhs10524.378-3H66.68
liver, embryo E14.CNhs10594.409-16E18.77
liver, embryo E15.CNhs10520.433-16D75.48
liver, embryo E16.CNhs10523.462-17F57.24
liver, embryo E17.CNhs10510.481-18A36.62
liver, embryo E18.CNhs10579.499-43G47.77
liver, neonate N00.CNhs11117.641-24F47.30
liver, neonate N03.CNhs11123.1345-25G28.51
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B96.55
liver, neonate N20.CNhs11220.823-25A35.05
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B114.04
lung, embryo E12.CNhs10522.354-16G28.34
lung, embryo E14.CNhs10604.404-26F88.96
lung, embryo E15.CNhs11020.432-17C58.66
lung, embryo E16.CNhs10998.458-17B69.15
lung, embryo E17.CNhs10605.480-44A610.55
lung, embryo E18.CNhs10583.1287-20I610.47
lung, neonate N00.CNhs11224.640-42C623.61
lung, neonate N06.CNhs11212.683-20E516.87
lung, neonate N07.CNhs11111.715-19A317.94
lung, neonate N10.CNhs11219.750-23E617.86
lung, neonate N20.CNhs11109.822-18A419.01
lung, neonate N25.CNhs11119.1359-25C711.92
lung, neonate N30.CNhs11133.1394-42H217.65
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A122.62
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A128.28
mammary gland, adult lactating day02.CNhs10480.595-22B611.80
mammary gland, adult pregnant day19.CNhs10476.588-5H27.45
medulla oblongata, adult.CNhs10477.17-12C27.06
medulla oblongata, neonate N30.CNhs11200.1396-42A35.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.25
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.86
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E19.15
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.32
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.40
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.32
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.04
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.53
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.23
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.46
olfactory brain, adult.CNhs10489.18-22I910.60
ovary, adult.CNhs10507.91-2I79.94
ovary, embryo E18.CNhs11040.505-44H79.62
ovary, neonate N00.CNhs11217.1299-22I49.61
oviduct, adult pregnant day01.CNhs10500.988-6G69.07
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F46.31
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E58.68
pancreas, embryo E17.CNhs10599.1558-45G312.40
pancreas, embryo E18.CNhs10580.1535-43I710.76
pancreas, neonate N00.CNhs11105.645-26G916.54
pancreas, neonate N01.CNhs11138.1531-43D79.45
pancreas, neonate N02.CNhs11139.1539-43D88.56
pancreas, neonate N16.CNhs11136.787-43B67.58
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G810.55
pituitary gland, embryo E12.CNhs11018.346-16E66.84
pituitary gland, embryo E13.CNhs11009.370-44C710.48
pituitary gland, embryo E14.CNhs11037.398-44A511.36
pituitary gland, embryo E15.CNhs10592.427-16B98.16
pituitary gland, embryo E16.CNhs11036.449-43F68.56
pituitary gland, embryo E17.CNhs11039.1265-44F59.71
pituitary gland, neonate N00.CNhs11190.1308-22E911.87
placenta, adult pregnant day10.CNhs10472.539-13I710.79
placenta, adult pregnant day17.CNhs10464.577-18G315.25
prostate, adult.CNhs10470.859-1F812.35
skin, adult.CNhs10492.30-1C39.89
skin, neonate N00.CNhs11124.650-25G410.33
skin, neonate N03.CNhs11215.662-22H310.55
skin, neonate N06.CNhs11097.693-20I512.41
skin, neonate N10.CNhs11108.762-6C411.65
small intestine, neonate N16.CNhs11114.790-21I114.57
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G29.23
spleen, embryo E16.CNhs11035.461-43C111.14
spleen, embryo E18.CNhs11011.1271-21F212.41
spleen, neonate N10.CNhs11116.752-24D111.68
spleen, neonate N20.CNhs11112.824-19H18.20
spleen, neonate N25.CNhs11099.1354-25G39.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C612.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C920.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.27
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E37.12
stomach, embryo E15.CNhs10603.1252-16G810.17
stomach, embryo E16.CNhs11022.459-17D49.07
stomach, embryo E17.CNhs11006.1035-18D58.36
stomach, embryo E18.CNhs10999.1286-20C610.26
stomach, neonate N03.CNhs11193.1340-24B89.98
stomach, neonate N07.CNhs11210.718-18A99.09
stomach, neonate N25.CNhs11104.1355-25E48.64
stomach, neonate N30.CNhs11134.1386-42I19.46
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G571.03
testis, embryo E13.CNhs11031.389-23F54.64
testis, embryo E15.CNhs11034.443-27C59.10
testis, embryo E16.CNhs11033.470-26G59.92
testis, embryo E17.CNhs11029.486-18I57.62
testis, embryo E18.CNhs11027.503-18G510.31
testis, neonate N00.CNhs11189.1300-22B77.63
testis, neonate N07.CNhs11222.726-26I49.37
testis, neonate N10.CNhs11204.763-44D98.81
testis, neonate N20.CNhs11110.839-18H347.59
testis, neonate N30.CNhs11130.1391-42E242.92
thymus, adult.CNhs10471.38-12B511.38
thymus, embryo E14.CNhs11041.402-44I46.89
thymus, embryo E15.CNhs11005.430-45I29.76
thymus, embryo E16.CNhs11002.456-26C58.44
thymus, embryo E17.CNhs10581.478-18C19.67
thymus, embryo E18.CNhs10595.1273-19G48.74
thymus, neonate N02.CNhs11181.1541-43F89.50
thymus, neonate N03.CNhs11137.2104-43C79.01
thymus, neonate N06.CNhs11197.681-26C412.22
thymus, neonate N07.CNhs11211.713-19D311.43
thymus, neonate N10.CNhs11194.748-24E413.41
thymus, neonate N20.CNhs11186.820-7A214.23
thymus, neonate N25.CNhs11125.1362-25G712.80
thymus, neonate N30.CNhs11132.1393-42G215.19
tongue, adult.CNhs10499.32-1B47.03
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.74
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G512.76
urinary bladder, adult.CNhs10481.879-12E411.40
uterus, adult pregnant day19.CNhs10497.590-15F510.32
uterus, adult.CNhs10509.92-27E514.47
vagina, adult.CNhs10502.89-27D58.36
vesicular gland, adult.CNhs10491.51-27F810.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.45
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A914.50
whole body, embryo E11.CNhs11014.324-5I88.10
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H210.41
whole body, embryo E14.5.CNhs10578.420-27D28.99
whole body, embryo E14.CNhs10519.395-14B17.97
whole body, embryo E16.CNhs10514.453-14F211.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.88
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.03
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.15
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.23
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.98
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.91
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.14
whole body, embryo E17.5.CNhs10513.490-9F99.07
whole body, embryo E17.CNhs10517.475-3I511.24
whole body, embryo E18.CNhs10516.493-3B38.42
whole body, neonate N00.CNhs10525.657-19C212.03
whole body, neonate N01.CNhs10576.659-23C611.67
whole body, neonate N06.CNhs10515.692-21D112.35
whole body, neonate N10.CNhs10518.761-6B49.27





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:107457016..107457094,%2B&oldid=999808"