Personal tools

FFCP PHASE1:Mm9::chr9:107456937..107456962,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:107456937..107456962,+
|short_description=p4@Rassf1
|description=CAGE_peak_4_at_Rassf1_5end
|association_with_transcript=23bp_to_NM_019713_5end
|EntrezGene=56289
|EntrezGene=56289
|HGNC=
|HGNC=
|UniProt=B0QZV8,Q3UIV8,Q99MK9
|UniProt=B0QZV8,Q3UIV8,Q99MK9
|association_with_transcript=23bp_to_NM_019713_5end
|description=CAGE_peak_4_at_Rassf1_5end
|id=chr9:107456937..107456962,+
|ontology_enrichment_disease=
|phase1_expression=4.64431656603902,3.83872948403297,5.91499011206397,6.35174843744343,7.51343594919521,4.19698179779725,3.73780224952841,0.774739940649458,4.22366166455,4.44722600011788,1.02730780935303,0.478632953972018,0.513602189793617,0.524522414513984,1.66554880907831,3.03712901084739,5.59649502502517,1.89277299214943,2.33094537129756,2.54633791078818,1.87095238332354,0.595745707205312,1.04479915655574,0.47997726838022,0.45881856213434,1.72269589234506,1.7230479846363,2.80112602491656,0.190023419456374,0,0.443461021310609,1.90509202037889,1.23012957516914,0,3.17736781726402,1.49611180822643,3.47087905646027,7.11503772252743,4.6880120671428,1.57057123192139,9.99993529652724,8.87959130445979,5.82612423637384,3.77690453926732,2.63580021170738,2.56965453026354,1.56478268869608,0.872100625521786,3.07560655828261,1.1665793944457,0.979904951377538,0,2.85230430298152,2.17608642603403,3.02484419228218,5.40244815675489,2.86533439938757,6.18806510732931,1.01158230429799,2.11596391708813,1.90149421051854,2.03306719241479,0.889294796111139,0.449949858640699,4.94433181283487,1.4209602298922,2.09720077362883,0.384218305321555,0.933206510776299,0.810035629990144,0.630974884054146,0.571301968807607,1.10434270475807,0.244981598429908,0.575072826109418,0.919218786610021,0,0.638436690425939,0.46081959976873,0.791317726381163,0.548925861614458,0.52091337055676,0.837548997004143,0,0.763991238884051,0.294628585473668,0.854230084794618,0,15.3724172466364,4.08086424576642,14.7830889237856,2.58127163094416,3.39985666853875,0,0.649776417447669,1.34408066129201,0.842666520790511,1.02258193546835,1.03914401841148,0.70667914902068,2.39433813620357,1.28326477414318,0,0,3.030874574157,2.02687892380079,3.53867111510348,1.37020655662872,0.258937883647172,1.1875371125186,0.867426633830679,2.43572382649713,0.461230994512117,1.20578112442098,0.705532242814229,0.502666365318702,2.96633961281249,1.44599356919912,0,1.7794353494215,1.32504911076236,1.93950101254089,1.86391761218122,1.75668478206928,0.83778682725382,0.766371165625774,4.31334448221313,1.79970819298022,3.43089613097275,0.748953197024114,0,0.125654352112864,0.521472960576829,0.511430914660661,0.41557608911912,0.162241263067758,2.34230536855727,1.61729061793121,1.26361379216837,0.841767423545896,1.30120442962704,2.5289231487682,0.900310649026746,2.71268672104287,2.04109497453984,2.69038812598185,2.34254311399322,2.06962696591213,1.07783996466421,0.189106080167819,0.175951124163949,3.28793598641362,1.66828349535359,0.696504333044333,2.46938563689532,1.99034266818493,2.1066395619397,4.11756651383544,4.54661599032948,1.24275463521301,2.81431271977315,2.52086886045421,2.3674473558521,3.14822770795846,2.00547246753592,0.930135779001631,3.75582761959467,2.21854150497622,1.6455984991348,4.10418660197738,2.75633952455909,3.07019973593198,1.97595103761946,3.08674763148855,0.420579897128254,0.720332286654991,0.660837565967596,0.264450566663544,1.2797295032114,1.62565670302307,0.77320476793256,1.21010114774006,1.33426826306922,1.14135375667535,0.949058123089023,1.64698954724011,1.25667604400135,1.39269530428806,2.14460495831032,1.79763881730844,0.864552199498777,0.796565093017469,1.89667900953082,0.571242563048644,5.63538678365402,1.83286195060783,1.74557238450863,2.17421041659988,2.40298841072178,2.06654207171443,1.8839847340965,1.35736880313981,0.889357881261447,1.16791574001266,1.96558995113203,2.24862112384854,3.04290182082754,0.964708639009667,1.01850340712568,1.15078454980324,1.45921704097532,1.09824565275233,2.87536413054709,1.11642284300551,1.87222603868736,0.505157755894224,1.07638448113147,2.41221760681684,2.40179147216586,0.757965647081939,1.14075483509418,1.86719594352707,1.40814148973101,2.1775813467436,3.09456733151818,3.90267295715598,1.89162172927429,4.65075848262427,3.98636921643718,3.76885623846197,3.10832967358612,5.20736610893442,1.50791283939272,1.08781136763742,1.47529281905711,0.827810238914197,1.12385412991454,0.703270119553219,1.14754461763673,1.76729649043061,0.315508219416257,1.56175497718655,1.07711698866399,3.58453196928828,2.67358408898873,1.69845918473299,0.404810701674894,2.04579100537918,1.58115111178609,0.321321316421807,1.41940085208269,2.13678724400706,2.76907830901079,1.31976098378028,0,1.21390318077491,2.41858845571801,1.32023555829129,0.885905678642318,2.15204603560749,2.58428293168221,1.45413491791002,1.78248689192361,0.316036757935816,2.10837217149998,0,0.680879211507576,0.900305470156551,1.55230420539305,1.71469628025274,1.24138163549592,1.07021290561242,0.987294123612726,1.522324745573,2.11204537257339,1.69465656691056,0.661585194164886,1.81374878235628,1.13025098687134,3.07595917133595,3.34242563208782,1.64140899745061,0.582961673259701,0.556275906031529,0.854354403989263,1.44470807574256,2.03713980106683,2.82552685507037,1.6403307326523,2.0590035588587,6.79913719975421,5.03825228365169,4.56059913554598,0.954670618015114,0.158167996790568,2.03319467126849,1.08005340821801,1.67270636811575,2.18362563746178,1.75323650300267,1.57041565878138,1.83229159388821,0.777689839750757,1.86401793926078,2.81846469342095,2.69129782879162,1.15820943319968,1.16670713006429,1.16243841129958,1.68956125490778,0.821500670520278,1.69265700297135,1.46803082195995,0.483168241652012,2.01621004380506,0.632022241256357,1.21635129174099,2.05421914329655,1.29920822977795,1.43221356533985,0.993406773906324,0.480781798079875,1.18151621739662,0.504832249740738,1.21930890648,1.10908803650525,1.07203668813728,0.577271049841977,0.935015217452552,2.0405734525369,1.10992976687032,2.9605572681127,4.53288464183012,0.772758376128762,1.31377732815827,1.83151624267265,1.92931541171159,1.00314420807073,0,0.460325236507177,0,0.515559547031063,1.37016503954128,0,0,0.900642406448441,2.26571204492102,1.55328093525546,1.14166082342594,0.798049746802062,1.53660245178721,1.94485373654635,0.628839487883947,1.65459157605013,1.11123363900808,0.618105171716683,0.962757628775446,0.758091635291392,1.52087579934144,1.69763707247469,1.96647165686753,1.47257850531199,1.55075766180156,2.38146845641537,1.27472758539341,1.35036454324594,1.23625770240992,2.50238164228475,2.05721551431249,1.95223386775271,1.90748951957857,1.59881058295561,2.25862512996793,1.52306294205018,1.09756783723664,1.31534855718921,1.22223702461276,0.561142271657738,1.77952527186261,1.77308068276014,1.63692417267876,2.16911577660352,2.70069255373598,0.999242311751784,1.63752125911786,1.71896843238639,1.53030665655075,2.8676884485537,1.85494268496337
|phase1_expression=4.64431656603902,3.83872948403297,5.91499011206397,6.35174843744343,7.51343594919521,4.19698179779725,3.73780224952841,0.774739940649458,4.22366166455,4.44722600011788,1.02730780935303,0.478632953972018,0.513602189793617,0.524522414513984,1.66554880907831,3.03712901084739,5.59649502502517,1.89277299214943,2.33094537129756,2.54633791078818,1.87095238332354,0.595745707205312,1.04479915655574,0.47997726838022,0.45881856213434,1.72269589234506,1.7230479846363,2.80112602491656,0.190023419456374,0,0.443461021310609,1.90509202037889,1.23012957516914,0,3.17736781726402,1.49611180822643,3.47087905646027,7.11503772252743,4.6880120671428,1.57057123192139,9.99993529652724,8.87959130445979,5.82612423637384,3.77690453926732,2.63580021170738,2.56965453026354,1.56478268869608,0.872100625521786,3.07560655828261,1.1665793944457,0.979904951377538,0,2.85230430298152,2.17608642603403,3.02484419228218,5.40244815675489,2.86533439938757,6.18806510732931,1.01158230429799,2.11596391708813,1.90149421051854,2.03306719241479,0.889294796111139,0.449949858640699,4.94433181283487,1.4209602298922,2.09720077362883,0.384218305321555,0.933206510776299,0.810035629990144,0.630974884054146,0.571301968807607,1.10434270475807,0.244981598429908,0.575072826109418,0.919218786610021,0,0.638436690425939,0.46081959976873,0.791317726381163,0.548925861614458,0.52091337055676,0.837548997004143,0,0.763991238884051,0.294628585473668,0.854230084794618,0,15.3724172466364,4.08086424576642,14.7830889237856,2.58127163094416,3.39985666853875,0,0.649776417447669,1.34408066129201,0.842666520790511,1.02258193546835,1.03914401841148,0.70667914902068,2.39433813620357,1.28326477414318,0,0,3.030874574157,2.02687892380079,3.53867111510348,1.37020655662872,0.258937883647172,1.1875371125186,0.867426633830679,2.43572382649713,0.461230994512117,1.20578112442098,0.705532242814229,0.502666365318702,2.96633961281249,1.44599356919912,0,1.7794353494215,1.32504911076236,1.93950101254089,1.86391761218122,1.75668478206928,0.83778682725382,0.766371165625774,4.31334448221313,1.79970819298022,3.43089613097275,0.748953197024114,0,0.125654352112864,0.521472960576829,0.511430914660661,0.41557608911912,0.162241263067758,2.34230536855727,1.61729061793121,1.26361379216837,0.841767423545896,1.30120442962704,2.5289231487682,0.900310649026746,2.71268672104287,2.04109497453984,2.69038812598185,2.34254311399322,2.06962696591213,1.07783996466421,0.189106080167819,0.175951124163949,3.28793598641362,1.66828349535359,0.696504333044333,2.46938563689532,1.99034266818493,2.1066395619397,4.11756651383544,4.54661599032948,1.24275463521301,2.81431271977315,2.52086886045421,2.3674473558521,3.14822770795846,2.00547246753592,0.930135779001631,3.75582761959467,2.21854150497622,1.6455984991348,4.10418660197738,2.75633952455909,3.07019973593198,1.97595103761946,3.08674763148855,0.420579897128254,0.720332286654991,0.660837565967596,0.264450566663544,1.2797295032114,1.62565670302307,0.77320476793256,1.21010114774006,1.33426826306922,1.14135375667535,0.949058123089023,1.64698954724011,1.25667604400135,1.39269530428806,2.14460495831032,1.79763881730844,0.864552199498777,0.796565093017469,1.89667900953082,0.571242563048644,5.63538678365402,1.83286195060783,1.74557238450863,2.17421041659988,2.40298841072178,2.06654207171443,1.8839847340965,1.35736880313981,0.889357881261447,1.16791574001266,1.96558995113203,2.24862112384854,3.04290182082754,0.964708639009667,1.01850340712568,1.15078454980324,1.45921704097532,1.09824565275233,2.87536413054709,1.11642284300551,1.87222603868736,0.505157755894224,1.07638448113147,2.41221760681684,2.40179147216586,0.757965647081939,1.14075483509418,1.86719594352707,1.40814148973101,2.1775813467436,3.09456733151818,3.90267295715598,1.89162172927429,4.65075848262427,3.98636921643718,3.76885623846197,3.10832967358612,5.20736610893442,1.50791283939272,1.08781136763742,1.47529281905711,0.827810238914197,1.12385412991454,0.703270119553219,1.14754461763673,1.76729649043061,0.315508219416257,1.56175497718655,1.07711698866399,3.58453196928828,2.67358408898873,1.69845918473299,0.404810701674894,2.04579100537918,1.58115111178609,0.321321316421807,1.41940085208269,2.13678724400706,2.76907830901079,1.31976098378028,0,1.21390318077491,2.41858845571801,1.32023555829129,0.885905678642318,2.15204603560749,2.58428293168221,1.45413491791002,1.78248689192361,0.316036757935816,2.10837217149998,0,0.680879211507576,0.900305470156551,1.55230420539305,1.71469628025274,1.24138163549592,1.07021290561242,0.987294123612726,1.522324745573,2.11204537257339,1.69465656691056,0.661585194164886,1.81374878235628,1.13025098687134,3.07595917133595,3.34242563208782,1.64140899745061,0.582961673259701,0.556275906031529,0.854354403989263,1.44470807574256,2.03713980106683,2.82552685507037,1.6403307326523,2.0590035588587,6.79913719975421,5.03825228365169,4.56059913554598,0.954670618015114,0.158167996790568,2.03319467126849,1.08005340821801,1.67270636811575,2.18362563746178,1.75323650300267,1.57041565878138,1.83229159388821,0.777689839750757,1.86401793926078,2.81846469342095,2.69129782879162,1.15820943319968,1.16670713006429,1.16243841129958,1.68956125490778,0.821500670520278,1.69265700297135,1.46803082195995,0.483168241652012,2.01621004380506,0.632022241256357,1.21635129174099,2.05421914329655,1.29920822977795,1.43221356533985,0.993406773906324,0.480781798079875,1.18151621739662,0.504832249740738,1.21930890648,1.10908803650525,1.07203668813728,0.577271049841977,0.935015217452552,2.0405734525369,1.10992976687032,2.9605572681127,4.53288464183012,0.772758376128762,1.31377732815827,1.83151624267265,1.92931541171159,1.00314420807073,0,0.460325236507177,0,0.515559547031063,1.37016503954128,0,0,0.900642406448441,2.26571204492102,1.55328093525546,1.14166082342594,0.798049746802062,1.53660245178721,1.94485373654635,0.628839487883947,1.65459157605013,1.11123363900808,0.618105171716683,0.962757628775446,0.758091635291392,1.52087579934144,1.69763707247469,1.96647165686753,1.47257850531199,1.55075766180156,2.38146845641537,1.27472758539341,1.35036454324594,1.23625770240992,2.50238164228475,2.05721551431249,1.95223386775271,1.90748951957857,1.59881058295561,2.25862512996793,1.52306294205018,1.09756783723664,1.31534855718921,1.22223702461276,0.561142271657738,1.77952527186261,1.77308068276014,1.63692417267876,2.16911577660352,2.70069255373598,0.999242311751784,1.63752125911786,1.71896843238639,1.53030665655075,2.8676884485537,1.85494268496337
|short_description=p4@Rassf1
}}
}}

Revision as of 02:02, 19 April 2012

Short description:p4@Rassf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rassf1_5end
Coexpression cluster:NA
Association with transcript: 23bp_to_NM_019713_5end
EntrezGene:Rassf1
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p4@Rassf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.35
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I22.80
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.12
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.64
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.57
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.40
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.19
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D915.37
Mouse Schwann, donor2.CNhs12573.11746-123F94.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.78
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.31
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.43
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.55
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E32.22
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G14.10
heart, neonate N16.CNhs11209.782-15G12.76
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.17
kidney, neonate N10.CNhs11206.758-6D52.40
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A34.65
lung, neonate N10.CNhs11219.750-23E63.99
lung, neonate N20.CNhs11109.822-18A43.77
lung, neonate N25.CNhs11119.1359-25C73.11
lung, neonate N30.CNhs11133.1394-42H25.21
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H33.08
skin, neonate N06.CNhs11097.693-20I53.34
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.56
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I22.05
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D31.22
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.53
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.