Personal tools

FFCP PHASE1:Mm9::chr4:21703408..21703444,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Usp45_5end
|description=CAGE_peak_1_at_Usp45_5end
|id=chr4:21703408..21703444,+
|id=chr4:21703408..21703444,+
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=8.32774004944929,14.6569671208532,10.0099832665698,41.1351327377289,32.5582224465126,9.40123922706583,10.2789561862031,14.332688902015,5.06839399746,6.78787126333781,11.6428218393343,8.37607669451032,23.9681021903688,19.0576477273414,28.3143297543313,46.3668362322701,55.9649502502517,21.4514272443602,20.978508341678,18.2487550273153,14.3723160355308,8.93618560807968,12.5375898786689,12.9593862462659,9.63518980482114,9.18771142584032,9.04600191934057,14.6520438226405,20.7125527207448,20.1624103807945,6.65191531965914,12.7006134691926,6.76571266343027,15.8481681015439,9.53210345179206,6.81562045969819,7.55426618170766,14.6486070757918,8.5946887897618,18.3233310390829,11.1763982725893,14.3439551841274,16.5073520030592,19.0104195143122,17.9437168258541,11.7469921383476,3.12956537739216,5.23260375313072,5.05278220289285,5.63846707315422,3.07970127575798,2.87505128729943,16.4426953936582,13.0565185562042,14.7881271622684,12.6057123657614,10.601737277734,12.3761302146586,5.26022798234954,4.7609188134483,6.33831403506179,1.69422266034566,0.889294796111139,4.04954872776629,0.988866362566974,0.7104801149461,1.79760066311043,1.53687322128622,9.7468235569969,6.88530285491622,6.52007380189284,4.57041575046086,5.30084498283872,7.59442955132715,6.3258010872036,9.19218786610021,25.3266526298594,28.9850257453376,26.1131106535614,5.27545150920775,7.13603620098795,4.16730696445408,21.4970909231063,18.5711661310454,20.933359945423,8.54422897873636,9.5389026135399,6.15118171223492,9.76867893998074,16.4746001032792,22.6094301187309,8.60423876981386,4.75979933595425,10.2543606411185,16.2444104361917,8.51251085484938,15.1679973742292,10.2258193546835,7.27400812888033,8.48014978824817,7.18301440861071,19.2489716121477,10.1922095882658,0,5.62876706629157,9.62767488805375,6.57181778519218,15.7573754012303,30.0367945030719,15.7348667408714,10.235634279202,12.1786191324856,7.84092690670599,13.565037649736,15.2865319276416,11.8126595849895,5.6854842578906,23.7142945348655,27.4229271104461,17.3090529443728,25.838457659866,29.5773904412485,11.1835056730873,33.3770108593164,31.4170060220183,20.1811073614787,7.0690923458493,4.19931911695385,8.13249453267614,28.9095934051308,29.7375391832107,10.4293112253677,33.8957424374939,30.174423964979,31.9993588621723,30.0146336675352,12.1188842981876,24.7569871514085,9.60346482047964,16.414464759145,13.6626465110839,14.0240283704418,14.5850325142333,17.3310540511072,15.6483948048054,19.4732854832972,15.9292931751539,20.4375662883822,10.3472636607764,16.2631228944325,17.9470146647228,11.1789823538063,16.1267404550847,14.2783388274088,14.610531684964,10.3497818745616,9.12877143507205,9.52187256324446,7.38825098428541,10.3562886267751,9.85009451920604,10.8037236876609,16.3353867553795,14.3637889175605,13.7297730469767,14.8821724640261,8.04820204198858,11.6765342367169,8.88623189532794,13.4617320544858,13.2952847655203,15.9357986293612,15.3685080703735,16.6415959262861,42.4785696099537,11.936935035997,32.0506219494284,11.6358249331959,11.0909890278322,14.8631469990681,12.8867461322093,10.2858597557905,12.8979265430025,13.1255682017666,18.0321043386914,8.72904460037258,9.55073793441024,14.1259095149217,14.8172706210531,17.0775687644302,19.6685625385972,18.7192796859105,7.96605184002943,13.1385789501188,14.6520056375005,12.2190796707189,12.8008641530633,11.1515953625607,13.026726647597,11.2183712464498,16.9558626068685,13.2034965396327,19.5658733877518,34.2032466717993,34.7909421350369,42.9486634655071,44.8320868268591,40.517762838406,29.7912246584261,24.4541716833189,15.0785760900783,17.8464918572253,8.62609239164127,8.93138274404408,18.0981850406445,12.3763650194085,14.351793081753,15.4381926836277,16.2582807346612,13.0749074121634,18.740972290833,11.2031756611624,13.1426539041561,21.6083072099942,17.139142143793,11.3177515757523,18.7585821486367,14.3952048271704,16.7427507090361,17.0417847304368,17.4411831684555,20.2508682014116,13.5712155545345,11.4220193601929,10.8188140064188,11.5893433447988,33.8761744874241,28.5996515284976,10.9836413402373,24.4896799388242,8.51872192423893,12.8844785617891,11.4174400798383,14.5770966751057,11.5855310522845,12.4553673547086,11.7395103485719,13.151513606009,11.4633455604492,26.66966926301,20.4393722699907,5.87616492101942,11.4020871547503,14.6823409445557,10.619611067197,7.52619972080442,5.13950046840077,12.0707251043775,3.83892460745005,13.5271465095328,11.8877014857382,10.1789444253702,10.6949213515416,13.9056173491759,5.27093042874994,18.5643977846736,14.2984634416591,13.324520958317,4.78627129996192,8.3591443662321,14.3645589250242,11.5939731441346,11.0247843803421,3.34911444026059,10.7948985709307,12.4980921809654,7.93902232997863,15.0046490176747,14.0474051225438,15.4401087816079,13.7278195603607,12.9671310798598,13.9910801582328,34.4891061739548,36.5663684907405,12.7959858137198,25.5568447770202,47.0921142511728,51.5337238508265,40.0361803111415,5.94924504978494,6.9975726161829,7.18639863783004,16.2294005062569,12.4952717464548,17.0788352386553,14.5807210109432,11.4998562807958,8.95286511359328,13.8910276776365,11.4888303458217,12.3025292732494,18.5349411807264,10.5627683224777,6.76431526421028,11.2137409532984,11.7475528224539,9.72255941720238,8.39538852605252,13.5164900392623,13.4960824442617,10.2861464026721,12.7928400199367,12.0792060413003,14.6895303191511,19.5926894789471,7.50083296573608,6.88163413004343,10.3936658382236,13.9640822620636,13.510332125126,12.9811085481566,15.0643317718069,18.6787932404073,15.012740911035,19.1569751759997,15.9830924413194,19.0499446447852,22.0897345123165,19.4988129909082,20.644693663788,18.7501960313804,21.8250001273302,14.4892195524143,14.451550609741,14.1026750685794,10.2896821957952,10.5330141847426,24.8490810751509,30.8417908459809,37.8111038870002,24.2312987104599,32.1988784292202,26.4387864086395,27.675922509504,27.0192721934532,36.2513927187364,33.1366599521165,11.3128208866753,16.7590446828433,16.3904261523969,20.4209642337367,13.4152424081909,12.3175150661509,15.3350242183115,16.4828045791115,14.1204452220399,13.8983466470089,14.4483200937437,16.9763707247469,15.4508487325306,14.1495586814761,15.7947539627936,11.4310485907938,13.7902347874378,14.2752823143142,18.1317796353455,14.4254941731709,10.6289468239479,15.6178709420217,15.4983523465759,15.2613737463945,15.9985946706062,13.7075664784516,14.6342378298218,17.0995312434598,14.8026484091989,19.0788372363631,14.4734722111492,15.4652037329635,14.3230865109391,13.9443157067369,10.6098636039628,8.99318080576605,15.439486157397,13.1071342969462,12.6250299165437,16.9855392722027,15.9988806578091
|phase1_expression=8.32774004944929,14.6569671208532,10.0099832665698,41.1351327377289,32.5582224465126,9.40123922706583,10.2789561862031,14.332688902015,5.06839399746,6.78787126333781,11.6428218393343,8.37607669451032,23.9681021903688,19.0576477273414,28.3143297543313,46.3668362322701,55.9649502502517,21.4514272443602,20.978508341678,18.2487550273153,14.3723160355308,8.93618560807968,12.5375898786689,12.9593862462659,9.63518980482114,9.18771142584032,9.04600191934057,14.6520438226405,20.7125527207448,20.1624103807945,6.65191531965914,12.7006134691926,6.76571266343027,15.8481681015439,9.53210345179206,6.81562045969819,7.55426618170766,14.6486070757918,8.5946887897618,18.3233310390829,11.1763982725893,14.3439551841274,16.5073520030592,19.0104195143122,17.9437168258541,11.7469921383476,3.12956537739216,5.23260375313072,5.05278220289285,5.63846707315422,3.07970127575798,2.87505128729943,16.4426953936582,13.0565185562042,14.7881271622684,12.6057123657614,10.601737277734,12.3761302146586,5.26022798234954,4.7609188134483,6.33831403506179,1.69422266034566,0.889294796111139,4.04954872776629,0.988866362566974,0.7104801149461,1.79760066311043,1.53687322128622,9.7468235569969,6.88530285491622,6.52007380189284,4.57041575046086,5.30084498283872,7.59442955132715,6.3258010872036,9.19218786610021,25.3266526298594,28.9850257453376,26.1131106535614,5.27545150920775,7.13603620098795,4.16730696445408,21.4970909231063,18.5711661310454,20.933359945423,8.54422897873636,9.5389026135399,6.15118171223492,9.76867893998074,16.4746001032792,22.6094301187309,8.60423876981386,4.75979933595425,10.2543606411185,16.2444104361917,8.51251085484938,15.1679973742292,10.2258193546835,7.27400812888033,8.48014978824817,7.18301440861071,19.2489716121477,10.1922095882658,0,5.62876706629157,9.62767488805375,6.57181778519218,15.7573754012303,30.0367945030719,15.7348667408714,10.235634279202,12.1786191324856,7.84092690670599,13.565037649736,15.2865319276416,11.8126595849895,5.6854842578906,23.7142945348655,27.4229271104461,17.3090529443728,25.838457659866,29.5773904412485,11.1835056730873,33.3770108593164,31.4170060220183,20.1811073614787,7.0690923458493,4.19931911695385,8.13249453267614,28.9095934051308,29.7375391832107,10.4293112253677,33.8957424374939,30.174423964979,31.9993588621723,30.0146336675352,12.1188842981876,24.7569871514085,9.60346482047964,16.414464759145,13.6626465110839,14.0240283704418,14.5850325142333,17.3310540511072,15.6483948048054,19.4732854832972,15.9292931751539,20.4375662883822,10.3472636607764,16.2631228944325,17.9470146647228,11.1789823538063,16.1267404550847,14.2783388274088,14.610531684964,10.3497818745616,9.12877143507205,9.52187256324446,7.38825098428541,10.3562886267751,9.85009451920604,10.8037236876609,16.3353867553795,14.3637889175605,13.7297730469767,14.8821724640261,8.04820204198858,11.6765342367169,8.88623189532794,13.4617320544858,13.2952847655203,15.9357986293612,15.3685080703735,16.6415959262861,42.4785696099537,11.936935035997,32.0506219494284,11.6358249331959,11.0909890278322,14.8631469990681,12.8867461322093,10.2858597557905,12.8979265430025,13.1255682017666,18.0321043386914,8.72904460037258,9.55073793441024,14.1259095149217,14.8172706210531,17.0775687644302,19.6685625385972,18.7192796859105,7.96605184002943,13.1385789501188,14.6520056375005,12.2190796707189,12.8008641530633,11.1515953625607,13.026726647597,11.2183712464498,16.9558626068685,13.2034965396327,19.5658733877518,34.2032466717993,34.7909421350369,42.9486634655071,44.8320868268591,40.517762838406,29.7912246584261,24.4541716833189,15.0785760900783,17.8464918572253,8.62609239164127,8.93138274404408,18.0981850406445,12.3763650194085,14.351793081753,15.4381926836277,16.2582807346612,13.0749074121634,18.740972290833,11.2031756611624,13.1426539041561,21.6083072099942,17.139142143793,11.3177515757523,18.7585821486367,14.3952048271704,16.7427507090361,17.0417847304368,17.4411831684555,20.2508682014116,13.5712155545345,11.4220193601929,10.8188140064188,11.5893433447988,33.8761744874241,28.5996515284976,10.9836413402373,24.4896799388242,8.51872192423893,12.8844785617891,11.4174400798383,14.5770966751057,11.5855310522845,12.4553673547086,11.7395103485719,13.151513606009,11.4633455604492,26.66966926301,20.4393722699907,5.87616492101942,11.4020871547503,14.6823409445557,10.619611067197,7.52619972080442,5.13950046840077,12.0707251043775,3.83892460745005,13.5271465095328,11.8877014857382,10.1789444253702,10.6949213515416,13.9056173491759,5.27093042874994,18.5643977846736,14.2984634416591,13.324520958317,4.78627129996192,8.3591443662321,14.3645589250242,11.5939731441346,11.0247843803421,3.34911444026059,10.7948985709307,12.4980921809654,7.93902232997863,15.0046490176747,14.0474051225438,15.4401087816079,13.7278195603607,12.9671310798598,13.9910801582328,34.4891061739548,36.5663684907405,12.7959858137198,25.5568447770202,47.0921142511728,51.5337238508265,40.0361803111415,5.94924504978494,6.9975726161829,7.18639863783004,16.2294005062569,12.4952717464548,17.0788352386553,14.5807210109432,11.4998562807958,8.95286511359328,13.8910276776365,11.4888303458217,12.3025292732494,18.5349411807264,10.5627683224777,6.76431526421028,11.2137409532984,11.7475528224539,9.72255941720238,8.39538852605252,13.5164900392623,13.4960824442617,10.2861464026721,12.7928400199367,12.0792060413003,14.6895303191511,19.5926894789471,7.50083296573608,6.88163413004343,10.3936658382236,13.9640822620636,13.510332125126,12.9811085481566,15.0643317718069,18.6787932404073,15.012740911035,19.1569751759997,15.9830924413194,19.0499446447852,22.0897345123165,19.4988129909082,20.644693663788,18.7501960313804,21.8250001273302,14.4892195524143,14.451550609741,14.1026750685794,10.2896821957952,10.5330141847426,24.8490810751509,30.8417908459809,37.8111038870002,24.2312987104599,32.1988784292202,26.4387864086395,27.675922509504,27.0192721934532,36.2513927187364,33.1366599521165,11.3128208866753,16.7590446828433,16.3904261523969,20.4209642337367,13.4152424081909,12.3175150661509,15.3350242183115,16.4828045791115,14.1204452220399,13.8983466470089,14.4483200937437,16.9763707247469,15.4508487325306,14.1495586814761,15.7947539627936,11.4310485907938,13.7902347874378,14.2752823143142,18.1317796353455,14.4254941731709,10.6289468239479,15.6178709420217,15.4983523465759,15.2613737463945,15.9985946706062,13.7075664784516,14.6342378298218,17.0995312434598,14.8026484091989,19.0788372363631,14.4734722111492,15.4652037329635,14.3230865109391,13.9443157067369,10.6098636039628,8.99318080576605,15.439486157397,13.1071342969462,12.6250299165437,16.9855392722027,15.9988806578091
|short_description=p1@Usp45
|short_description=p1@Usp45
}}
}}

Revision as of 21:11, 18 April 2012

Short description:p1@Usp45
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Usp45_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000040429, ENSMUST00000065111, ENSMUST00000108232, ENSMUST00000125262, ENSMUST00000148304, NM_152825, uc008scy.1, uc008scz.1, uc008sda.1, uc008sdb.1, uc008sdc.1_5end
EntrezGene:Usp45
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Usp45

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I514.66
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.01
CD326+ enterocyte, pool1.CNhs13542.11848-124I341.14
CD326+ enterocyte, pool2.CNhs13197.11849-124I432.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.40
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.28
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E914.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E611.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.38
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E423.97
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E819.06
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A128.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A346.37
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A555.96
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A221.45
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A420.98
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A618.25
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.37
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I912.54
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D112.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.64
GP2+ M cell, pool1.CNhs13228.11845-124H99.19
GP2+ M cell, pool2.CNhs13231.11846-124I19.05
GP2+ M cell, pool3.CNhs13240.11847-124I214.65
Ileum epithelium, pool1.CNhs13199.10252-104B920.71
Ileum epithelium, pool2.CNhs13232.10253-104C120.16
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.70
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.53
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.55
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G814.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H318.32
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H214.34
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H416.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D819.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D917.94
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.23
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.05
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.64
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A216.44
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.06
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A114.79
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.61
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.38
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.75
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.33
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D325.33
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F328.99
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D726.11
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.28
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.14
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E421.50
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.93
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D99.77
Mouse Schwann, donor2.CNhs12573.11746-123F916.47
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G322.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F416.24
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.51
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.48
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.18
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.63
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.63
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.57
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.76
accessory axillary lymph node, adult.CNhs10475.1063-29H930.04
adrenal gland, adult.CNhs10508.49-24D715.73
adrenal gland, embryo E14.CNhs11038.406-44C510.24
adrenal gland, embryo E16.CNhs11004.1254-43D612.18
adrenal gland, embryo E17.CNhs11043.1263-45I17.84
adrenal gland, embryo E18.CNhs11026.1262-18F513.57
adrenal gland, neonate N00.CNhs11191.1311-23C115.29
adrenal gland, neonate N25.CNhs11223.1377-27I311.81
amnion, adult pregnant day17.5.CNhs10488.583-22A85.69
aorta, adult.CNhs10498.46-23H123.71
bone (os femoris), adult.CNhs10483.56-12G227.42
bone (os femoris), neonate N02.CNhs11227.1985-43F517.31
bone (os femoris), neonate N16.CNhs11225.1525-43A625.84
bone (os femoris), neonate N20.CNhs11195.1350-25C329.58
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B233.38
cerebellum, neonate N30.CNhs11135.1395-42I231.42
colon, adult.CNhs10468.36-18H720.18
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.07
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D48.13
corpora quadrigemina, adult.CNhs10501.16-22A428.91
corpus striatum, adult.CNhs10487.19-21D829.74
corpus striatum, neonate N00.CNhs11226.630-43F110.43
cortex, adult.CNhs10473.12-14D533.90
cortex, neonate N30.CNhs11107.1392-42F230.17
diencephalon, adult.CNhs10482.20-12F232.00
diencephalon, neonate N30.CNhs11201.1388-42B230.01
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A224.76
epididymis, adult.CNhs10490.58-23B29.60
eyeball, adult.CNhs10484.31-12G416.41
eyeball, embryo E12.CNhs11016.345-16C613.66
eyeball, embryo E14.CNhs10521.399-16E214.02
eyeball, embryo E15.CNhs10593.426-16C914.59
eyeball, embryo E17.CNhs11023.1261-18D417.33
eyeball, neonate N00.CNhs11207.633-15C615.65
eyeball, neonate N01.CNhs11140.1532-43E719.47
eyeball, neonate N02.CNhs11205.1551-44G815.93
eyeball, neonate N16.CNhs11188.777-19A220.44
forelimb, embryo E11.CNhs10596.335-25E210.35
forelimb, embryo E12.CNhs10600.359-14H216.26
forelimb, embryo E13.CNhs10589.384-1E217.95
forelimb, embryo E14.CNhs10577.413-26A811.18
forelimb, embryo E15.CNhs11007.437-20E716.13
forelimb, embryo E17.CNhs10598.1517-43C414.28
forelimb, embryo E18.CNhs11008.1520-43B514.61
gonad, embryo E13.CNhs11044.1564-45I610.35
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.13
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.52
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.39
heart, embryo E11.CNhs10586.331-24E910.36
heart, embryo E12.CNhs11015.353-12F59.85
heart, embryo E13.CNhs11013.376-3I910.80
heart, embryo E14.CNhs10597.403-26D416.34
heart, embryo E15.CNhs11017.431-16C814.36
heart, embryo E16.CNhs11021.457-17C613.73
heart, embryo E17.CNhs11025.479-18E514.88
heart, embryo E18.CNhs11030.1283-20G38.05
heart, neonate N00.CNhs11213.639-21E311.68
heart, neonate N03.CNhs11221.1349-25I28.89
heart, neonate N10.CNhs11118.749-24G113.46
heart, neonate N16.CNhs11209.782-15G113.30
heart, neonate N20.CNhs11127.821-26I615.94
heart, neonate N25.CNhs11196.1351-25D315.37
heart, neonate N30.CNhs11202.1390-42D216.64
hippocampus, adult.CNhs10478.13-16E842.48
hippocampus, neonate N00.CNhs11228.627-43G111.94
intestinal mucosa, adult.CNhs10506.860-29I332.05
intestine, adult.CNhs10496.178-9A311.64
intestine, embryo E12.CNhs11019.1251-16I511.09
intestine, embryo E13.CNhs11010.381-16D514.86
intestine, embryo E15.CNhs10602.976-16D812.89
intestine, embryo E16.CNhs10585.463-22H410.29
intestine, embryo E17.CNhs10582.482-18D312.90
intestine, embryo E18.CNhs10526.1289-20F713.13
intestine, neonate N00.CNhs11126.644-26D118.03
intestine, neonate N01.CNhs11192.1322-23E98.73
intestine, neonate N06.CNhs11102.688-20B89.55
intestine, neonate N07.CNhs11095.720-20F214.13
intestine, neonate N10.CNhs11098.755-23A514.82
intestine, neonate N20.CNhs11187.827-18D117.08
intestine, neonate N25.CNhs11121.1352-25E319.67
intestine, neonate N30.CNhs11131.1384-42G118.72
kidney, embryo E14.CNhs10606.411-4I97.97
kidney, embryo E15.CNhs10997.434-16F813.14
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I212.22
kidney, embryo E18.CNhs11001.1288-20C712.80
kidney, neonate N00.CNhs11214.646-21G711.15
kidney, neonate N10.CNhs11206.758-6D513.03
kidney, neonate N20.CNhs11113.832-19I111.22
kidney, neonate N25.CNhs11122.1353-25F316.96
kidney, neonate N30.CNhs11203.1385-42H113.20
liver, adult pregnant day01.CNhs10466.508-5B219.57
liver, embryo E12.CNhs10601.355-15F834.20
liver, embryo E13.CNhs10524.378-3H634.79
liver, embryo E14.CNhs10594.409-16E142.95
liver, embryo E15.CNhs10520.433-16D744.83
liver, embryo E16.CNhs10523.462-17F540.52
liver, embryo E17.CNhs10510.481-18A329.79
liver, embryo E18.CNhs10579.499-43G424.45
liver, neonate N00.CNhs11117.641-24F415.08
liver, neonate N03.CNhs11123.1345-25G217.85
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H28.93
liver, neonate N10.CNhs11115.751-24B918.10
liver, neonate N20.CNhs11220.823-25A312.38
liver, neonate N25.CNhs11198.1368-26H114.35
liver, neonate N30.CNhs11106.1382-42D115.44
lung, adult.CNhs10474.28-22B116.26
lung, embryo E12.CNhs10522.354-16G213.07
lung, embryo E14.CNhs10604.404-26F818.74
lung, embryo E15.CNhs11020.432-17C511.20
lung, embryo E16.CNhs10998.458-17B613.14
lung, embryo E17.CNhs10605.480-44A621.61
lung, embryo E18.CNhs10583.1287-20I617.14
lung, neonate N00.CNhs11224.640-42C611.32
lung, neonate N06.CNhs11212.683-20E518.76
lung, neonate N07.CNhs11111.715-19A314.40
lung, neonate N10.CNhs11219.750-23E616.74
lung, neonate N20.CNhs11109.822-18A417.04
lung, neonate N25.CNhs11119.1359-25C717.44
lung, neonate N30.CNhs11133.1394-42H220.25
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A111.42
mammary gland, adult lactating day02.CNhs10480.595-22B610.82
mammary gland, adult pregnant day19.CNhs10476.588-5H211.59
medulla oblongata, adult.CNhs10477.17-12C233.88
medulla oblongata, neonate N30.CNhs11200.1396-42A328.60
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C224.49
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.88
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.42
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.59
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.46
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.15
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.46
olfactory brain, adult.CNhs10489.18-22I926.67
ovary, adult.CNhs10507.91-2I720.44
ovary, embryo E18.CNhs11040.505-44H75.88
ovary, neonate N00.CNhs11217.1299-22I411.40
oviduct, adult pregnant day01.CNhs10500.988-6G614.68
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F47.53
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E512.07
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I713.53
pancreas, neonate N00.CNhs11105.645-26G911.89
pancreas, neonate N01.CNhs11138.1531-43D710.18
pancreas, neonate N02.CNhs11139.1539-43D810.69
pancreas, neonate N16.CNhs11136.787-43B613.91
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H518.56
pituitary gland, adult.CNhs10493.21-1G814.30
pituitary gland, embryo E12.CNhs11018.346-16E613.32
pituitary gland, embryo E13.CNhs11009.370-44C74.79
pituitary gland, embryo E14.CNhs11037.398-44A58.36
pituitary gland, embryo E15.CNhs10592.427-16B914.36
pituitary gland, embryo E16.CNhs11036.449-43F611.59
pituitary gland, embryo E17.CNhs11039.1265-44F511.02
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I710.79
placenta, adult pregnant day17.CNhs10464.577-18G312.50
prostate, adult.CNhs10470.859-1F87.94
skin, adult.CNhs10492.30-1C315.00
skin, neonate N00.CNhs11124.650-25G414.05
skin, neonate N03.CNhs11215.662-22H315.44
skin, neonate N06.CNhs11097.693-20I513.73
skin, neonate N10.CNhs11108.762-6C412.97
small intestine, neonate N16.CNhs11114.790-21I113.99
spinal cord, adult.CNhs10505.24-13C934.49
spleen, adult.CNhs10465.25-2G236.57
spleen, embryo E16.CNhs11035.461-43C112.80
spleen, embryo E18.CNhs11011.1271-21F225.56
spleen, neonate N10.CNhs11116.752-24D147.09
spleen, neonate N20.CNhs11112.824-19H151.53
spleen, neonate N25.CNhs11099.1354-25G340.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.19
stomach, adult.CNhs10503.33-1H616.23
stomach, embryo E12.CNhs10588.356-43E312.50
stomach, embryo E15.CNhs10603.1252-16G817.08
stomach, embryo E16.CNhs11022.459-17D414.58
stomach, embryo E17.CNhs11006.1035-18D511.50
stomach, embryo E18.CNhs10999.1286-20C68.95
stomach, neonate N03.CNhs11193.1340-24B813.89
stomach, neonate N07.CNhs11210.718-18A911.49
stomach, neonate N25.CNhs11104.1355-25E412.30
stomach, neonate N30.CNhs11134.1386-42I118.53
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G56.76
testis, embryo E13.CNhs11031.389-23F511.21
testis, embryo E15.CNhs11034.443-27C511.75
testis, embryo E16.CNhs11033.470-26G59.72
testis, embryo E17.CNhs11029.486-18I58.40
testis, embryo E18.CNhs11027.503-18G513.52
testis, neonate N00.CNhs11189.1300-22B713.50
testis, neonate N07.CNhs11222.726-26I410.29
testis, neonate N10.CNhs11204.763-44D912.79
testis, neonate N20.CNhs11110.839-18H312.08
testis, neonate N30.CNhs11130.1391-42E214.69
thymus, adult.CNhs10471.38-12B519.59
thymus, embryo E14.CNhs11041.402-44I47.50
thymus, embryo E15.CNhs11005.430-45I26.88
thymus, embryo E16.CNhs11002.456-26C510.39
thymus, embryo E17.CNhs10581.478-18C113.96
thymus, embryo E18.CNhs10595.1273-19G413.51
thymus, neonate N02.CNhs11181.1541-43F812.98
thymus, neonate N03.CNhs11137.2104-43C715.06
thymus, neonate N06.CNhs11197.681-26C418.68
thymus, neonate N07.CNhs11211.713-19D315.01
thymus, neonate N10.CNhs11194.748-24E419.16
thymus, neonate N20.CNhs11186.820-7A215.98
thymus, neonate N25.CNhs11125.1362-25G719.05
thymus, neonate N30.CNhs11132.1393-42G222.09
tongue, adult.CNhs10499.32-1B419.50
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H320.64
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F718.75
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G521.83
urinary bladder, adult.CNhs10481.879-12E414.49
uterus, adult pregnant day19.CNhs10497.590-15F514.45
uterus, adult.CNhs10509.92-27E514.10
vagina, adult.CNhs10502.89-27D510.29
vesicular gland, adult.CNhs10491.51-27F810.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A124.85
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A230.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A337.81
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D724.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A432.20
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A526.44
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.02
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A836.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A933.14
whole body, embryo E11.CNhs11014.324-5I811.31
whole body, embryo E12.CNhs10587.857-27C916.76
whole body, embryo E13.CNhs10512.372-23H216.39
whole body, embryo E14.5.CNhs10578.420-27D220.42
whole body, embryo E14.CNhs10519.395-14B113.42
whole body, embryo E16.CNhs10514.453-14F212.32
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.90
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.45
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.98
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.45
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.79
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G518.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.43
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.62
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.50
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.63
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.80
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.08
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.47
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G514.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.94
whole body, embryo E17.5.CNhs10513.490-9F910.61
whole body, embryo E17.CNhs10517.475-3I58.99
whole body, embryo E18.CNhs10516.493-3B315.44
whole body, neonate N00.CNhs10525.657-19C213.11
whole body, neonate N01.CNhs10576.659-23C612.63
whole body, neonate N06.CNhs10515.692-21D116.99
whole body, neonate N10.CNhs10518.761-6B416.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:21703408..21703444,%2B&oldid=955761"