Personal tools

FFCP PHASE1:Mm9::chr4:134024249..134024321,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Stmn1_5end
|description=CAGE_peak_1_at_Stmn1_5end
|id=chr4:134024249..134024321,+
|id=chr4:134024249..134024321,+
|ontology_enrichment_celltype=CL:0000540!2.00e-12!33;CL:0000047!2.00e-12!33;CL:0000031!2.00e-12!33;CL:0000404!2.00e-12!33;CL:0000117!5.91e-10!23;CL:0000337!5.91e-10!23;CL:0000221!9.94e-10!44;CL:0000133!9.94e-10!44;CL:0002319!1.15e-09!43;CL:0000393!6.53e-08!39;CL:0000211!6.53e-08!39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=45.4822725777615,9.42233600626275,5.45999087267443,3.93203474698879,5.00895729946347,16.1164101035414,22.660426137766,5.29405626110463,6.61706994112834,11.7032263160997,3.08192342805909,2.87179772383211,7.19043065711064,6.38168937658681,39.9731714178795,69.85396724949,114.028586134888,13.249410945046,9.87223921961319,25.4633791078818,39.6301732103985,45.0780918452019,84.889931470154,21.1189998087297,25.4644301984559,8.6134794617253,12.9228598847722,14.8675150553263,23.1828571736776,24.1948924569534,27.7163138319131,46.3572391625531,18.4519436275371,31.6963362030877,62.6808014860266,70.4834896320008,64.3133472226463,25.1118978442145,65.6321689399992,50.7818031654584,17.6469446409304,23.9065919735456,21.8479658864019,8.68688044031483,9.0225468785368,14.3166466686112,21.9069576417451,68.6779242598407,23.5064215525885,15.3599620268684,47.3154105093725,60.3760770332881,9.2280433331755,7.97898356212479,9.74672017513146,16.9791227783725,19.7708073557742,5.15672092277442,286.48010857719,298.879903288699,304.239073682966,31.5125414824293,29.3467282716676,7.64914759689189,10.8775299882367,9.9467216092454,18.8748069626595,29.5848095097597,201.572606327681,217.359560714022,240.40143082463,72.2696990541623,81.0587545292422,350.446176553983,342.264177006122,287.715480208937,52.8556228797066,43.7967569632194,48.0788449092042,351.608843088697,366.865450845663,354.742005349154,43.5525478442154,72.033614084055,52.7153954829995,88.3885756421003,115.463433128072,173.537884063355,21.8848698732902,100.056745581384,10.7249860819621,5.16254326188832,1.3599426674155,2.69851595818909,1.94932925234301,1.79210754838934,13.6231087527799,25.7349787092867,47.2810528377221,55.4743131981234,55.0697771326821,32.0816193535795,10.1922095882658,21.3320010945999,43.0817171612316,38.7640594176901,39.9364311561679,11.7609396110632,6.99132285847364,2.82040064223167,57.2501578328248,41.1028395721391,34.8229400856648,30.747418672735,31.6313622195046,14.325991411583,8.15743393523434,2.4581890676385,36.2690326299448,30.8974683399552,21.863310327579,34.911018225736,27.9587641827183,16.9812862266697,19.2690970268379,12.7728527604296,115.142334650189,185.369943876963,98.9877068899174,47.7832139701384,35.6850470198529,326.073043732883,90.9101194605606,79.0160763150721,52.9859513626878,53.2151342862245,56.2153288453746,23.2641035040874,6.82351447770922,4.41927897361595,83.5373243820558,107.824086979299,101.014854820801,88.1623184338933,93.6862593313785,98.7756783396192,77.2102210372166,6.20888089773638,99.3768447420403,83.5848874341761,71.9640097830551,71.677004503817,63.9508673218875,37.9594861509162,37.4523488262457,79.6137067273973,115.162962719371,131.247432628505,52.0019203893935,59.2379709451535,65.901822854688,67.8833971708026,57.7657154827913,56.6680987432523,58.9300371229785,44.4139834473279,42.9237442239391,46.7061369468678,33.2410896825231,19.5359282254123,7.78260571640215,4.38599962275997,7.90380415047782,9.12603647570528,43.5300193527743,228.345334869632,1.65209391491899,8.46241813323342,95.9797127408553,91.2690120411523,55.7996107524664,44.3703754171354,32.9119504890408,27.202264534096,15.1849299694244,16.3051965176771,24.3795152536261,22.2831248686089,17.3518037536017,15.2799299471218,19.2362864388478,12.7450414882795,123.473803520456,82.144680566395,86.7849564682719,62.1136549928208,47.7123118432359,44.255702350791,25.2946148497029,3.98547399544926,7.69293766422737,6.78684401569903,1.48226313543574,38.0406841032694,38.5255630421878,36.877386431116,39.7605837921466,30.6294992885569,24.6987076227977,24.1664755458681,31.2920987675818,22.7885972946108,18.6898668485561,14.8856379067401,16.2259590019572,10.6083128737787,7.17589654087649,0.964887042726734,12.0089573608293,87.166049414423,98.1049158180996,109.825070496547,90.5904358393618,52.764471094172,26.1848004974615,15.4155581807661,44.610745782052,47.3934435848378,24.874943910568,11.1427054006702,14.3328534948693,14.7542039753142,24.1266054302836,14.1415477792864,10.3270497333998,10.2096596132751,32.5917697675218,40.5552435609023,30.0000950039316,7.82659874333556,93.7059411666282,86.2869624895571,102.110690525347,86.9846424547289,73.7463611212725,80.1106582132396,93.9160827885755,69.2646383249809,73.1282389201069,58.8018009051907,15.1875891172847,59.295846021196,53.7526965866801,15.3422214364458,3.98235415019888,52.440617409476,45.3485335447127,35.080544834597,27.4630760379119,15.9866276930842,19.1236936944484,33.808636841408,34.9367430817027,9.48110273807448,9.48767477174989,7.21948802737308,17.3624198934432,78.8667591857139,64.9380592589428,63.2294253343197,43.448357242357,38.8844022372514,49.3647061806363,34.7090041990643,24.4058576386259,20.9713750155182,3.74898276693435,17.9726015706213,40.0431778205846,42.7618637740625,31.7530435048343,25.2776985607394,14.2825609948627,29.11177241565,39.9837861066975,68.5204401637899,56.2991363203923,59.3360639564777,45.9292605142645,40.9512930039675,80.9097326770751,74.7340755408334,79.0503850161304,16.2294005062569,98.5386620005237,56.3194923941371,58.2148787029509,46.6266900112265,41.7072496755199,34.2555439817445,23.1429676030941,6.28214260761671,9.33227807700909,2.4853572523477,165.725723973152,83.4302326925402,86.8657074899762,71.3635861222655,76.5917753222945,73.6648707139793,61.6125502890208,60.8054477221247,46.3478302361642,112.095032063267,97.0661121089007,112.183947823003,75.0083296573607,74.7735768159942,92.6335467831678,117.97859244487,101.724853648008,99.8824185510941,118.74237984836,132.871848131762,126.19847182068,116.655896203324,105.254511198933,105.640602121082,73.2818176678437,3.85441652145859,29.0801598920025,8.43310252129072,20.1461539636894,5.21611903886914,6.94425159169373,11.9048555773722,12.2189976075068,8.02515366456581,107.86760193986,117.38293530933,124.891221929788,199.521544701021,93.856305208578,92.1580554815435,91.1280375312938,94.1171314738621,84.7376304800462,88.5370133095612,124.337242405844,77.4108254398,90.318077443937,65.3957068913711,94.745149507848,71.5151247870555,47.1163062939424,49.4484137373346,46.2123661812214,44.4747092704284,46.6401911798041,51.3063648570127,50.0982064963871,46.2261600363156,48.3606648606264,37.6272016113628,45.3107714444385,49.3847604387085,48.2140503939869,54.463600449727,56.2305573912081,49.3382741122958,50.7869084587794,49.127088821727,49.4074247180486,49.161087185064,48.1100568655392,51.2985937303794,50.7907385783523,39.2799590160417,41.8781613978335,48.956727740655,42.9692595328174,48.3402944500214,48.6124659672476,69.447340666749,45.3827320384092,47.9162450527705,31.3712864592903,23.1620990075491,20.8681052058379
|phase1_expression=45.4822725777615,9.42233600626275,5.45999087267443,3.93203474698879,5.00895729946347,16.1164101035414,22.660426137766,5.29405626110463,6.61706994112834,11.7032263160997,3.08192342805909,2.87179772383211,7.19043065711064,6.38168937658681,39.9731714178795,69.85396724949,114.028586134888,13.249410945046,9.87223921961319,25.4633791078818,39.6301732103985,45.0780918452019,84.889931470154,21.1189998087297,25.4644301984559,8.6134794617253,12.9228598847722,14.8675150553263,23.1828571736776,24.1948924569534,27.7163138319131,46.3572391625531,18.4519436275371,31.6963362030877,62.6808014860266,70.4834896320008,64.3133472226463,25.1118978442145,65.6321689399992,50.7818031654584,17.6469446409304,23.9065919735456,21.8479658864019,8.68688044031483,9.0225468785368,14.3166466686112,21.9069576417451,68.6779242598407,23.5064215525885,15.3599620268684,47.3154105093725,60.3760770332881,9.2280433331755,7.97898356212479,9.74672017513146,16.9791227783725,19.7708073557742,5.15672092277442,286.48010857719,298.879903288699,304.239073682966,31.5125414824293,29.3467282716676,7.64914759689189,10.8775299882367,9.9467216092454,18.8748069626595,29.5848095097597,201.572606327681,217.359560714022,240.40143082463,72.2696990541623,81.0587545292422,350.446176553983,342.264177006122,287.715480208937,52.8556228797066,43.7967569632194,48.0788449092042,351.608843088697,366.865450845663,354.742005349154,43.5525478442154,72.033614084055,52.7153954829995,88.3885756421003,115.463433128072,173.537884063355,21.8848698732902,100.056745581384,10.7249860819621,5.16254326188832,1.3599426674155,2.69851595818909,1.94932925234301,1.79210754838934,13.6231087527799,25.7349787092867,47.2810528377221,55.4743131981234,55.0697771326821,32.0816193535795,10.1922095882658,21.3320010945999,43.0817171612316,38.7640594176901,39.9364311561679,11.7609396110632,6.99132285847364,2.82040064223167,57.2501578328248,41.1028395721391,34.8229400856648,30.747418672735,31.6313622195046,14.325991411583,8.15743393523434,2.4581890676385,36.2690326299448,30.8974683399552,21.863310327579,34.911018225736,27.9587641827183,16.9812862266697,19.2690970268379,12.7728527604296,115.142334650189,185.369943876963,98.9877068899174,47.7832139701384,35.6850470198529,326.073043732883,90.9101194605606,79.0160763150721,52.9859513626878,53.2151342862245,56.2153288453746,23.2641035040874,6.82351447770922,4.41927897361595,83.5373243820558,107.824086979299,101.014854820801,88.1623184338933,93.6862593313785,98.7756783396192,77.2102210372166,6.20888089773638,99.3768447420403,83.5848874341761,71.9640097830551,71.677004503817,63.9508673218875,37.9594861509162,37.4523488262457,79.6137067273973,115.162962719371,131.247432628505,52.0019203893935,59.2379709451535,65.901822854688,67.8833971708026,57.7657154827913,56.6680987432523,58.9300371229785,44.4139834473279,42.9237442239391,46.7061369468678,33.2410896825231,19.5359282254123,7.78260571640215,4.38599962275997,7.90380415047782,9.12603647570528,43.5300193527743,228.345334869632,1.65209391491899,8.46241813323342,95.9797127408553,91.2690120411523,55.7996107524664,44.3703754171354,32.9119504890408,27.202264534096,15.1849299694244,16.3051965176771,24.3795152536261,22.2831248686089,17.3518037536017,15.2799299471218,19.2362864388478,12.7450414882795,123.473803520456,82.144680566395,86.7849564682719,62.1136549928208,47.7123118432359,44.255702350791,25.2946148497029,3.98547399544926,7.69293766422737,6.78684401569903,1.48226313543574,38.0406841032694,38.5255630421878,36.877386431116,39.7605837921466,30.6294992885569,24.6987076227977,24.1664755458681,31.2920987675818,22.7885972946108,18.6898668485561,14.8856379067401,16.2259590019572,10.6083128737787,7.17589654087649,0.964887042726734,12.0089573608293,87.166049414423,98.1049158180996,109.825070496547,90.5904358393618,52.764471094172,26.1848004974615,15.4155581807661,44.610745782052,47.3934435848378,24.874943910568,11.1427054006702,14.3328534948693,14.7542039753142,24.1266054302836,14.1415477792864,10.3270497333998,10.2096596132751,32.5917697675218,40.5552435609023,30.0000950039316,7.82659874333556,93.7059411666282,86.2869624895571,102.110690525347,86.9846424547289,73.7463611212725,80.1106582132396,93.9160827885755,69.2646383249809,73.1282389201069,58.8018009051907,15.1875891172847,59.295846021196,53.7526965866801,15.3422214364458,3.98235415019888,52.440617409476,45.3485335447127,35.080544834597,27.4630760379119,15.9866276930842,19.1236936944484,33.808636841408,34.9367430817027,9.48110273807448,9.48767477174989,7.21948802737308,17.3624198934432,78.8667591857139,64.9380592589428,63.2294253343197,43.448357242357,38.8844022372514,49.3647061806363,34.7090041990643,24.4058576386259,20.9713750155182,3.74898276693435,17.9726015706213,40.0431778205846,42.7618637740625,31.7530435048343,25.2776985607394,14.2825609948627,29.11177241565,39.9837861066975,68.5204401637899,56.2991363203923,59.3360639564777,45.9292605142645,40.9512930039675,80.9097326770751,74.7340755408334,79.0503850161304,16.2294005062569,98.5386620005237,56.3194923941371,58.2148787029509,46.6266900112265,41.7072496755199,34.2555439817445,23.1429676030941,6.28214260761671,9.33227807700909,2.4853572523477,165.725723973152,83.4302326925402,86.8657074899762,71.3635861222655,76.5917753222945,73.6648707139793,61.6125502890208,60.8054477221247,46.3478302361642,112.095032063267,97.0661121089007,112.183947823003,75.0083296573607,74.7735768159942,92.6335467831678,117.97859244487,101.724853648008,99.8824185510941,118.74237984836,132.871848131762,126.19847182068,116.655896203324,105.254511198933,105.640602121082,73.2818176678437,3.85441652145859,29.0801598920025,8.43310252129072,20.1461539636894,5.21611903886914,6.94425159169373,11.9048555773722,12.2189976075068,8.02515366456581,107.86760193986,117.38293530933,124.891221929788,199.521544701021,93.856305208578,92.1580554815435,91.1280375312938,94.1171314738621,84.7376304800462,88.5370133095612,124.337242405844,77.4108254398,90.318077443937,65.3957068913711,94.745149507848,71.5151247870555,47.1163062939424,49.4484137373346,46.2123661812214,44.4747092704284,46.6401911798041,51.3063648570127,50.0982064963871,46.2261600363156,48.3606648606264,37.6272016113628,45.3107714444385,49.3847604387085,48.2140503939869,54.463600449727,56.2305573912081,49.3382741122958,50.7869084587794,49.127088821727,49.4074247180486,49.161087185064,48.1100568655392,51.2985937303794,50.7907385783523,39.2799590160417,41.8781613978335,48.956727740655,42.9692595328174,48.3402944500214,48.6124659672476,69.447340666749,45.3827320384092,47.9162450527705,31.3712864592903,23.1620990075491,20.8681052058379
|short_description=p1@Stmn1
|short_description=p1@Stmn1
}}
}}

Revision as of 20:38, 18 April 2012

Short description:p1@Stmn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Stmn1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000127279, ENSMUST00000130253, ENSMUST00000175071_5end
EntrezGene:Stmn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Stmn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G745.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I716.12
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I822.66
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.87
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.19
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.38
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A139.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A369.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5114.03
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A213.25
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.87
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A625.46
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A339.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H245.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I984.89
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D121.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D225.46
GP2+ M cell, pool1.CNhs13228.11845-124H98.61
GP2+ M cell, pool2.CNhs13231.11846-124I112.92
GP2+ M cell, pool3.CNhs13240.11847-124I214.87
Ileum epithelium, pool1.CNhs13199.10252-104B923.18
Ileum epithelium, pool2.CNhs13232.10253-104C124.19
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C827.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I346.36
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G618.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F562.68
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F670.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F764.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G825.11
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H165.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H350.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G917.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H223.91
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H421.85
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.69
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D99.02
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B314.32
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B721.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C268.68
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B823.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C315.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C447.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C460.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.23
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.75
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C116.98
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E119.77
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C3286.48
Mouse Granule cells, donor2.CNhs12357.11731-123E3298.88
Mouse Granule cells, donor3.CNhs12108.11636-122C7304.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C631.51
Mouse Meningeal cells, donor3.CNhs12109.11639-122D129.35
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.95
Mouse Microglia, donor1.CNhs12629.11718-123C818.87
Mouse Microglia, donor2.CNhs12634.11736-123E829.58
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5201.57
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5217.36
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9240.40
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F172.27
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D581.06
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2350.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2342.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6287.72
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D352.86
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F343.80
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D748.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4351.61
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4366.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8354.74
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E443.55
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E572.03
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I652.72
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D688.39
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6115.46
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1173.54
Mouse Schwann, donor1.CNhs12507.11728-123D921.88
Mouse Schwann, donor2.CNhs12573.11746-123F9100.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.72
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I725.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E347.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I855.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G655.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H132.08
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G143.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G238.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G339.94
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.76
accessory axillary lymph node, adult.CNhs10475.1063-29H96.99
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C557.25
adrenal gland, embryo E16.CNhs11004.1254-43D641.10
adrenal gland, embryo E17.CNhs11043.1263-45I134.82
adrenal gland, embryo E18.CNhs11026.1262-18F530.75
adrenal gland, neonate N00.CNhs11191.1311-23C131.63
adrenal gland, neonate N25.CNhs11223.1377-27I314.33
amnion, adult pregnant day17.5.CNhs10488.583-22A88.16
aorta, adult.CNhs10498.46-23H12.46
bone (os femoris), adult.CNhs10483.56-12G236.27
bone (os femoris), neonate N02.CNhs11227.1985-43F530.90
bone (os femoris), neonate N16.CNhs11225.1525-43A621.86
bone (os femoris), neonate N20.CNhs11195.1350-25C334.91
cecum, adult.CNhs10467.37-13H427.96
cerebellum, adult.CNhs10494.15-8B216.98
cerebellum, neonate N30.CNhs11135.1395-42I219.27
colon, adult.CNhs10468.36-18H712.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7115.14
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1185.37
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D498.99
corpora quadrigemina, adult.CNhs10501.16-22A447.78
corpus striatum, adult.CNhs10487.19-21D835.69
corpus striatum, neonate N00.CNhs11226.630-43F1326.07
cortex, adult.CNhs10473.12-14D590.91
cortex, neonate N30.CNhs11107.1392-42F279.02
diencephalon, adult.CNhs10482.20-12F252.99
diencephalon, neonate N30.CNhs11201.1388-42B253.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B156.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A223.26
epididymis, adult.CNhs10490.58-23B26.82
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C683.54
eyeball, embryo E14.CNhs10521.399-16E2107.82
eyeball, embryo E15.CNhs10593.426-16C9101.01
eyeball, embryo E17.CNhs11023.1261-18D488.16
eyeball, neonate N00.CNhs11207.633-15C693.69
eyeball, neonate N01.CNhs11140.1532-43E798.78
eyeball, neonate N02.CNhs11205.1551-44G877.21
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E299.38
forelimb, embryo E12.CNhs10600.359-14H283.58
forelimb, embryo E13.CNhs10589.384-1E271.96
forelimb, embryo E14.CNhs10577.413-26A871.68
forelimb, embryo E15.CNhs11007.437-20E763.95
forelimb, embryo E17.CNhs10598.1517-43C437.96
forelimb, embryo E18.CNhs11008.1520-43B537.45
gonad, embryo E13.CNhs11044.1564-45I679.61
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8115.16
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2131.25
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D552.00
heart, embryo E11.CNhs10586.331-24E959.24
heart, embryo E12.CNhs11015.353-12F565.90
heart, embryo E13.CNhs11013.376-3I967.88
heart, embryo E14.CNhs10597.403-26D457.77
heart, embryo E15.CNhs11017.431-16C856.67
heart, embryo E16.CNhs11021.457-17C658.93
heart, embryo E17.CNhs11025.479-18E544.41
heart, embryo E18.CNhs11030.1283-20G342.92
heart, neonate N00.CNhs11213.639-21E346.71
heart, neonate N03.CNhs11221.1349-25I233.24
heart, neonate N10.CNhs11118.749-24G119.54
heart, neonate N16.CNhs11209.782-15G17.78
heart, neonate N20.CNhs11127.821-26I64.39
heart, neonate N25.CNhs11196.1351-25D37.90
heart, neonate N30.CNhs11202.1390-42D29.13
hippocampus, adult.CNhs10478.13-16E843.53
hippocampus, neonate N00.CNhs11228.627-43G1228.35
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A38.46
intestine, embryo E12.CNhs11019.1251-16I595.98
intestine, embryo E13.CNhs11010.381-16D591.27
intestine, embryo E15.CNhs10602.976-16D855.80
intestine, embryo E16.CNhs10585.463-22H444.37
intestine, embryo E17.CNhs10582.482-18D332.91
intestine, embryo E18.CNhs10526.1289-20F727.20
intestine, neonate N00.CNhs11126.644-26D115.18
intestine, neonate N01.CNhs11192.1322-23E916.31
intestine, neonate N06.CNhs11102.688-20B824.38
intestine, neonate N07.CNhs11095.720-20F222.28
intestine, neonate N10.CNhs11098.755-23A517.35
intestine, neonate N20.CNhs11187.827-18D115.28
intestine, neonate N25.CNhs11121.1352-25E319.24
intestine, neonate N30.CNhs11131.1384-42G112.75
kidney, embryo E14.CNhs10606.411-4I9123.47
kidney, embryo E15.CNhs10997.434-16F882.14
kidney, embryo E16.CNhs10584.464-22A586.78
kidney, embryo E17.CNhs11028.483-18I262.11
kidney, embryo E18.CNhs11001.1288-20C747.71
kidney, neonate N00.CNhs11214.646-21G744.26
kidney, neonate N10.CNhs11206.758-6D525.29
kidney, neonate N20.CNhs11113.832-19I13.99
kidney, neonate N25.CNhs11122.1353-25F37.69
kidney, neonate N30.CNhs11203.1385-42H16.79
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F838.04
liver, embryo E13.CNhs10524.378-3H638.53
liver, embryo E14.CNhs10594.409-16E136.88
liver, embryo E15.CNhs10520.433-16D739.76
liver, embryo E16.CNhs10523.462-17F530.63
liver, embryo E17.CNhs10510.481-18A324.70
liver, embryo E18.CNhs10579.499-43G424.17
liver, neonate N00.CNhs11117.641-24F431.29
liver, neonate N03.CNhs11123.1345-25G222.79
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H214.89
liver, neonate N10.CNhs11115.751-24B916.23
liver, neonate N20.CNhs11220.823-25A310.61
liver, neonate N25.CNhs11198.1368-26H17.18
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B112.01
lung, embryo E12.CNhs10522.354-16G287.17
lung, embryo E14.CNhs10604.404-26F898.10
lung, embryo E15.CNhs11020.432-17C5109.83
lung, embryo E16.CNhs10998.458-17B690.59
lung, embryo E17.CNhs10605.480-44A652.76
lung, embryo E18.CNhs10583.1287-20I626.18
lung, neonate N00.CNhs11224.640-42C615.42
lung, neonate N06.CNhs11212.683-20E544.61
lung, neonate N07.CNhs11111.715-19A347.39
lung, neonate N10.CNhs11219.750-23E624.87
lung, neonate N20.CNhs11109.822-18A411.14
lung, neonate N25.CNhs11119.1359-25C714.33
lung, neonate N30.CNhs11133.1394-42H214.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A124.13
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.14
mammary gland, adult lactating day02.CNhs10480.595-22B610.33
mammary gland, adult pregnant day19.CNhs10476.588-5H210.21
medulla oblongata, adult.CNhs10477.17-12C232.59
medulla oblongata, neonate N30.CNhs11200.1396-42A340.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C730.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.83
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E193.71
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E286.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3102.11
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D786.98
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D873.75
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D980.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D493.92
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D569.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D673.13
olfactory brain, adult.CNhs10489.18-22I958.80
ovary, adult.CNhs10507.91-2I715.19
ovary, embryo E18.CNhs11040.505-44H759.30
ovary, neonate N00.CNhs11217.1299-22I453.75
oviduct, adult pregnant day01.CNhs10500.988-6G615.34
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F452.44
pancreas, embryo E15.CNhs11042.1556-45F245.35
pancreas, embryo E16.CNhs11003.460-26E535.08
pancreas, embryo E17.CNhs10599.1558-45G327.46
pancreas, embryo E18.CNhs10580.1535-43I715.99
pancreas, neonate N00.CNhs11105.645-26G919.12
pancreas, neonate N01.CNhs11138.1531-43D733.81
pancreas, neonate N02.CNhs11139.1539-43D834.94
pancreas, neonate N16.CNhs11136.787-43B69.48
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G817.36
pituitary gland, embryo E12.CNhs11018.346-16E678.87
pituitary gland, embryo E13.CNhs11009.370-44C764.94
pituitary gland, embryo E14.CNhs11037.398-44A563.23
pituitary gland, embryo E15.CNhs10592.427-16B943.45
pituitary gland, embryo E16.CNhs11036.449-43F638.88
pituitary gland, embryo E17.CNhs11039.1265-44F549.36
pituitary gland, neonate N00.CNhs11190.1308-22E934.71
placenta, adult pregnant day10.CNhs10472.539-13I724.41
placenta, adult pregnant day17.CNhs10464.577-18G320.97
prostate, adult.CNhs10470.859-1F83.75
skin, adult.CNhs10492.30-1C317.97
skin, neonate N00.CNhs11124.650-25G440.04
skin, neonate N03.CNhs11215.662-22H342.76
skin, neonate N06.CNhs11097.693-20I531.75
skin, neonate N10.CNhs11108.762-6C425.28
small intestine, neonate N16.CNhs11114.790-21I114.28
spinal cord, adult.CNhs10505.24-13C929.11
spleen, adult.CNhs10465.25-2G239.98
spleen, embryo E16.CNhs11035.461-43C168.52
spleen, embryo E18.CNhs11011.1271-21F256.30
spleen, neonate N10.CNhs11116.752-24D159.34
spleen, neonate N20.CNhs11112.824-19H145.93
spleen, neonate N25.CNhs11099.1354-25G340.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C680.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C974.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D379.05
stomach, adult.CNhs10503.33-1H616.23
stomach, embryo E12.CNhs10588.356-43E398.54
stomach, embryo E15.CNhs10603.1252-16G856.32
stomach, embryo E16.CNhs11022.459-17D458.21
stomach, embryo E17.CNhs11006.1035-18D546.63
stomach, embryo E18.CNhs10999.1286-20C641.71
stomach, neonate N03.CNhs11193.1340-24B834.26
stomach, neonate N07.CNhs11210.718-18A923.14
stomach, neonate N25.CNhs11104.1355-25E46.28
stomach, neonate N30.CNhs11134.1386-42I19.33
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G5165.73
testis, embryo E13.CNhs11031.389-23F583.43
testis, embryo E15.CNhs11034.443-27C586.87
testis, embryo E16.CNhs11033.470-26G571.36
testis, embryo E17.CNhs11029.486-18I576.59
testis, embryo E18.CNhs11027.503-18G573.66
testis, neonate N00.CNhs11189.1300-22B761.61
testis, neonate N07.CNhs11222.726-26I460.81
testis, neonate N10.CNhs11204.763-44D946.35
testis, neonate N20.CNhs11110.839-18H3112.10
testis, neonate N30.CNhs11130.1391-42E297.07
thymus, adult.CNhs10471.38-12B5112.18
thymus, embryo E14.CNhs11041.402-44I475.01
thymus, embryo E15.CNhs11005.430-45I274.77
thymus, embryo E16.CNhs11002.456-26C592.63
thymus, embryo E17.CNhs10581.478-18C1117.98
thymus, embryo E18.CNhs10595.1273-19G4101.72
thymus, neonate N02.CNhs11181.1541-43F899.88
thymus, neonate N03.CNhs11137.2104-43C7118.74
thymus, neonate N06.CNhs11197.681-26C4132.87
thymus, neonate N07.CNhs11211.713-19D3126.20
thymus, neonate N10.CNhs11194.748-24E4116.66
thymus, neonate N20.CNhs11186.820-7A2105.25
thymus, neonate N25.CNhs11125.1362-25G7105.64
thymus, neonate N30.CNhs11132.1393-42G273.28
tongue, adult.CNhs10499.32-1B43.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H329.08
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.43
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G520.15
urinary bladder, adult.CNhs10481.879-12E45.22
uterus, adult pregnant day19.CNhs10497.590-15F56.94
uterus, adult.CNhs10509.92-27E511.90
vagina, adult.CNhs10502.89-27D512.22
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1107.87
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2117.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3124.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7199.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A493.86
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A592.16
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A691.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A794.12
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A884.74
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A988.54
whole body, embryo E11.CNhs11014.324-5I8124.34
whole body, embryo E12.CNhs10587.857-27C977.41
whole body, embryo E13.CNhs10512.372-23H290.32
whole body, embryo E14.5.CNhs10578.420-27D265.40
whole body, embryo E14.CNhs10519.395-14B194.75
whole body, embryo E16.CNhs10514.453-14F271.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G547.12
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G549.45
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G546.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G544.47
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G546.64
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G551.31
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G550.10
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G546.23
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G548.36
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G537.63
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G545.31
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G549.38
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G548.21
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G554.46
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G556.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G549.34
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G550.79
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G549.13
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G549.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G549.16
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G548.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G551.30
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G550.79
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G539.28
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G541.88
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G548.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G542.97
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G548.34
whole body, embryo E17.5.CNhs10513.490-9F948.61
whole body, embryo E17.CNhs10517.475-3I569.45
whole body, embryo E18.CNhs10516.493-3B345.38
whole body, neonate N00.CNhs10525.657-19C247.92
whole body, neonate N01.CNhs10576.659-23C631.37
whole body, neonate N06.CNhs10515.692-21D123.16
whole body, neonate N10.CNhs10518.761-6B420.87





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:134024249..134024321,%2B&oldid=950698"