FFCP PHASE1:Mm9::chr6:54922622..54922637,-: Difference between revisions
From FANTOM5_SSTAR
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{{FFCP | {{FFCP | ||
|EntrezGene=107607 | |EntrezGene=107607 | ||
|HGNC= | |HGNC= | ||
|UniProt=Q8BHB0,Q540J8 | |UniProt=Q8BHB0,Q540J8 | ||
|association_with_transcript=-16bp_to_ENSMUST00000060655,NM_172729,uc009cag.2_5end | |||
|description=CAGE_peak_3_at_Nod1_5end | |||
|id=chr6:54922622..54922637,- | |||
|ontology_enrichment_disease= | |||
|phase1_expression=0,1.04692622291808,1.36499771816861,2.11724947914781,2.00358291978539,1.34303417529512,0.233612640595526,21.4344716913017,0.140788722151667,0.936258105287974,0,0.0797721589953364,9.75844160607873,9.61624426608971,3.33109761815663,2.83465374345756,0.699561878128147,8.99067171270977,10.6949258212476,6.79023442876848,1.10556277196391,0.496454756004426,0.783599367416806,0.319984845586813,0.45881856213434,1.14846392823004,0,0.430942465371778,1.52018735565099,1.76421090831952,0.886922042621219,0,0,0,3.17736781726402,1.66234645358492,1.63335485009895,8.78916424547506,1.5626706890476,5.23523743973798,7.05877785637217,7.5135003345429,6.311634589405,0.503587271902309,0.304130793658544,0.367093504323363,0.782391344348039,0,0.439372365468944,0.388859798148567,0,0,2.85230430298152,7.25362142011344,10.7550015725588,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,1.7997994345628,3.9554654502679,4.2628806896766,0,0.768436610643109,0.103689612308478,0.135005938331691,0.420649922702764,0.571301968807607,0.441737081903227,0.122490799214954,0,0,0,0.638436690425939,1.22885226604995,0.263772575460388,0,0.52091337055676,1.11673199600552,1.12552522006336,1.06958773443767,0,0.711858403995515,0,0.37863096666592,0.755715601067855,2.89864488701678,0,0,1.61910957491345,1.94932925234301,1.79210754838934,1.12355536105401,0,0,1.06001872353102,0.281686839553361,2.56652954828636,2.54805239706646,7.11066703153331,0.432982082022428,0,0,1.59857431606684,8.02707439306232,0.742210695324124,0.173485326766136,0.304465478312141,0,0.301445281105245,0.352766121407114,0.753999547978053,0.741584903203122,1.87979163995885,3.5384422077995,0.647067399789637,1.32504911076236,1.45462575940567,9.31958806090611,0.292780797011547,0,1.02182822083437,1.43778149407104,1.19980546198682,0.635351135365324,1.3481157546434,0.915001205637253,0,0.347648640384553,0.255715457330331,0.62336413367868,0.648965052271031,0.407357455401265,1.11966273549084,0.505445516867349,3.15662783829711,0.260240885925407,0,0,0.452114453507145,0.204109497453984,0.384341160854549,0.281105173679186,0.517406741478031,0,0,0.351902248327898,0.219195732427575,0.278047249225598,1.0447564995665,1.02891068203972,0.199034266818493,0,1.02939162845886,0.852490498186778,0.207125772535502,0,0,0.23674473558521,0,0,0.930135779001631,1.07309360559848,0.350296027101508,0.329119699826961,0.32833492815819,1.29710095273369,1.90059983652932,0.439100230582101,1.34206418760372,0,0.205809224758569,0.660837565967596,0.793351699990633,0,0,0,1.00841762311671,0.444756087689741,0.760902504450237,0.949058123089023,1.4822905925161,0.502670417600539,2.38747766449381,1.55971269695296,0,1.29682829924817,1.39398891278057,0,0.114248512609729,0,0,0,0.420814919341911,1.07502113111237,1.47610147979602,0.784993639206874,1.60416313098341,2.07516838961004,0,0.393117990226406,0.449724224769707,0.405720242777006,0.72353147925725,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,8.62609239164127,3.34926852901653,0.312037673114561,2.77836765741823,1.97337154874103,2.41221760681684,4.98833613449833,0,0,0.339490171550376,0.469380496577004,1.34005005953453,1.6663054862021,1.75620283072019,1.26108115284953,1.99318220683897,0.956728611944923,2.94953966488328,2.76295970985433,1.59113964439663,0,0,1.47529281905711,3.31124095565679,1.12385412991454,1.28932855251423,0,1.00988370881749,0,0,0,0.238968797952552,0.668396022247182,1.13230612315533,0,0.292255857911312,0.395287777946524,0.321321316421807,0.99358059645788,0,0.651547837414304,3.29940245945071,3.98235415019888,0.242780636154981,0.604647113929502,0.377210159511796,0.885905678642318,0.614870295887855,1.03371317267288,0.727067458955011,1.42598951353889,2.21225730555071,0,3.09406629744561,1.36175842301515,0,0,0,0.532020700926821,0.178368817602071,0.164549020602121,0.304464949114599,0.469343416127421,0.847328283455281,1.32317038832977,4.122156323537,1.77610869365496,1.14594557363496,2.26807453605959,1.64140899745061,1.1659233465194,2.22510362412612,5.12612642393558,0.206386867963223,2.03713980106683,2.0720530270516,2.46049609897845,1.14389086603261,1.01987057996313,1.11961161858926,0.690999869022119,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.87345025498471,0.269728692769641,0.578574190077352,1.83229159388821,1.94422459937689,2.4853572523477,0,0,0.165458490457098,0.388902376688095,0,0.506868376472335,0.704143431874524,0.781226309063701,0.419437377702843,0.483168241652012,0,1.58005560314089,0,0.308132871494482,0.389762468933385,0.716106782669926,0,0.841368146639782,0.886137163047463,1.11063094942962,1.37172251979,0.604957110821043,1.65678397257579,1.34696578296461,1.5193997283604,0.226730383615211,0,0,0,1.73870634628971,1.12609485270709,1.64836461840539,2.57242054894879,2.50786052017682,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,1.10306105070008,0.44449345560323,1.85431551515005,0.320919209591815,1.26348605881899,0.760437899670719,0.565879024158229,0.749132059759059,0.960377286073039,0.3446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| |phase1_expression=0,1.04692622291808,1.36499771816861,2.11724947914781,2.00358291978539,1.34303417529512,0.233612640595526,21.4344716913017,0.140788722151667,0.936258105287974,0,0.0797721589953364,9.75844160607873,9.61624426608971,3.33109761815663,2.83465374345756,0.699561878128147,8.99067171270977,10.6949258212476,6.79023442876848,1.10556277196391,0.496454756004426,0.783599367416806,0.319984845586813,0.45881856213434,1.14846392823004,0,0.430942465371778,1.52018735565099,1.76421090831952,0.886922042621219,0,0,0,3.17736781726402,1.66234645358492,1.63335485009895,8.78916424547506,1.5626706890476,5.23523743973798,7.05877785637217,7.5135003345429,6.311634589405,0.503587271902309,0.304130793658544,0.367093504323363,0.782391344348039,0,0.439372365468944,0.388859798148567,0,0,2.85230430298152,7.25362142011344,10.7550015725588,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,1.7997994345628,3.9554654502679,4.2628806896766,0,0.768436610643109,0.103689612308478,0.135005938331691,0.420649922702764,0.571301968807607,0.441737081903227,0.122490799214954,0,0,0,0.638436690425939,1.22885226604995,0.263772575460388,0,0.52091337055676,1.11673199600552,1.12552522006336,1.06958773443767,0,0.711858403995515,0,0.37863096666592,0.755715601067855,2.89864488701678,0,0,1.61910957491345,1.94932925234301,1.79210754838934,1.12355536105401,0,0,1.06001872353102,0.281686839553361,2.56652954828636,2.54805239706646,7.11066703153331,0.432982082022428,0,0,1.59857431606684,8.02707439306232,0.742210695324124,0.173485326766136,0.304465478312141,0,0.301445281105245,0.352766121407114,0.753999547978053,0.741584903203122,1.87979163995885,3.5384422077995,0.647067399789637,1.32504911076236,1.45462575940567,9.31958806090611,0.292780797011547,0,1.02182822083437,1.43778149407104,1.19980546198682,0.635351135365324,1.3481157546434,0.915001205637253,0,0.347648640384553,0.255715457330331,0.62336413367868,0.648965052271031,0.407357455401265,1.11966273549084,0.505445516867349,3.15662783829711,0.260240885925407,0,0,0.452114453507145,0.204109497453984,0.384341160854549,0.281105173679186,0.517406741478031,0,0,0.351902248327898,0.219195732427575,0.278047249225598,1.0447564995665,1.02891068203972,0.199034266818493,0,1.02939162845886,0.852490498186778,0.207125772535502,0,0,0.23674473558521,0,0,0.930135779001631,1.07309360559848,0.350296027101508,0.329119699826961,0.32833492815819,1.29710095273369,1.90059983652932,0.439100230582101,1.34206418760372,0,0.205809224758569,0.660837565967596,0.793351699990633,0,0,0,1.00841762311671,0.444756087689741,0.760902504450237,0.949058123089023,1.4822905925161,0.502670417600539,2.38747766449381,1.55971269695296,0,1.29682829924817,1.39398891278057,0,0.114248512609729,0,0,0,0.420814919341911,1.07502113111237,1.47610147979602,0.784993639206874,1.60416313098341,2.07516838961004,0,0.393117990226406,0.449724224769707,0.405720242777006,0.72353147925725,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,8.62609239164127,3.34926852901653,0.312037673114561,2.77836765741823,1.97337154874103,2.41221760681684,4.98833613449833,0,0,0.339490171550376,0.469380496577004,1.34005005953453,1.6663054862021,1.75620283072019,1.26108115284953,1.99318220683897,0.956728611944923,2.94953966488328,2.76295970985433,1.59113964439663,0,0,1.47529281905711,3.31124095565679,1.12385412991454,1.28932855251423,0,1.00988370881749,0,0,0,0.238968797952552,0.668396022247182,1.13230612315533,0,0.292255857911312,0.395287777946524,0.321321316421807,0.99358059645788,0,0.651547837414304,3.29940245945071,3.98235415019888,0.242780636154981,0.604647113929502,0.377210159511796,0.885905678642318,0.614870295887855,1.03371317267288,0.727067458955011,1.42598951353889,2.21225730555071,0,3.09406629744561,1.36175842301515,0,0,0,0.532020700926821,0.178368817602071,0.164549020602121,0.304464949114599,0.469343416127421,0.847328283455281,1.32317038832977,4.122156323537,1.77610869365496,1.14594557363496,2.26807453605959,1.64140899745061,1.1659233465194,2.22510362412612,5.12612642393558,0.206386867963223,2.03713980106683,2.0720530270516,2.46049609897845,1.14389086603261,1.01987057996313,1.11961161858926,0.690999869022119,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.87345025498471,0.269728692769641,0.578574190077352,1.83229159388821,1.94422459937689,2.4853572523477,0,0,0.165458490457098,0.388902376688095,0,0.506868376472335,0.704143431874524,0.781226309063701,0.419437377702843,0.483168241652012,0,1.58005560314089,0,0.308132871494482,0.389762468933385,0.716106782669926,0,0.841368146639782,0.886137163047463,1.11063094942962,1.37172251979,0.604957110821043,1.65678397257579,1.34696578296461,1.5193997283604,0.226730383615211,0,0,0,1.73870634628971,1.12609485270709,1.64836461840539,2.57242054894879,2.50786052017682,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,1.10306105070008,0.44449345560323,1.85431551515005,0.320919209591815,1.26348605881899,0.760437899670719,0.565879024158229,0.749132059759059,0.960377286073039,0.3446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| ||
|short_description=p3@Nod1 | |||
}} | }} | ||
Revision as of 20:30, 18 April 2012
| Short description: | p3@Nod1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Nod1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -16bp_to_ENSMUST00000060655, NM_172729, uc009cag.2_5end |
| EntrezGene: | Nod1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
