Personal tools

FFCP PHASE1:Mm9::chr3:54496727..54496758,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Fam48a_5end
|description=CAGE_peak_1_at_Fam48a_5end
|id=chr3:54496727..54496758,+
|id=chr3:54496727..54496758,+
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=22.4208385946712,6.97950815278722,3.18499467572675,9.98131897312539,11.520601788766,8.89760141133016,7.00837921786577,29.569241068121,5.77233760821834,4.21316147379588,19.3476304094821,16.5128369120346,26.3649124094057,26.3135411281182,10.3264026162855,16.8054471933556,7.69518065940961,22.7132759057931,23.1723392793699,18.6731446791133,76.5389611359628,12.5106598513115,8.8807928307238,9.5995453676044,9.40578052375397,2.29692785646008,6.8921919385452,6.46413698057667,9.88121781173144,10.837295579677,9.09095093686749,6.98533740805594,6.1506478758457,0,9.53210345179206,11.137721239019,12.4543307320045,22.600708059793,22.6587249911902,37.1701858221397,28.2351114254887,25.9557284284209,33.0147040061184,11.330713617802,12.4693625400003,12.4811791469943,6.25913075478431,5.01457859675027,3.95435128922049,3.88859798148567,8.39918529752175,5.75010257459886,18.9594344845242,15.9579671242496,13.779845764841,6.17422646486273,10.0286703978565,7.73508138416164,12.7459370341547,10.5798195854407,9.50747105259269,4.74382344896785,6.22506357277798,1.7997994345628,1.97773272513395,4.2628806896766,2.99600110518405,4.2264013585371,18.8715094401429,13.6355997715008,13.0401476037857,7.42692559449889,9.27647871996777,19.3535462759627,21.3735400370667,18.3843757322004,7.70811166995721,13.2794831608595,9.5236050618871,14.3756053625911,15.8273623432169,17.1901412283731,12.8424179540635,8.4414391504752,12.3766580699216,10.606629077052,15.8032565687004,15.2847545576746,27.8672391466117,19.2707478272303,24.9283460283443,9.46466264679525,0.679971333707751,3.77792234146472,1.29955283489534,5.82434953226536,12.6399978118577,21.9855116125695,14.2882302531578,12.3668851078619,20.703982707172,14.115912515575,7.64415719119937,0,6.27824018932521,4.56047757855178,4.04419556011827,19.4112595522402,45.8320054055494,12.7660239595749,14.3992821215893,13.7009465240464,13.3756988408514,15.0722640552623,19.519725384527,10.3046604890334,13.3485282576562,16.7735254027098,19.4614321428972,18.4414208940046,12.5879665522424,15.0311328471919,13.0474232852686,20.7874365878198,19.6879904404648,10.9846533739694,15.9354115592874,20.9965955847693,14.7401463404755,17.5255048103643,20.5875271268382,22.1151659718641,15.8180131374972,14.8314965251592,15.1685272528479,12.4925772562173,24.7469654156269,14.4312085907708,20.7232661915613,14.7309299120532,22.1204753036596,17.9323641458109,22.8678904852794,26.0719334855787,24.8333221902347,27.1601087003882,21.7388000978571,20.4375662883822,12.9340795759705,23.2600478606418,25.1610107554447,17.9740500590611,27.5266776733342,26.4671646556847,25.1054206417691,22.6899064173082,21.7686088067103,20.0731367549478,15.9131559661532,18.0199422105887,15.4787199587523,18.7264543919455,21.0702814670837,18.495837784256,23.4486011588815,17.9051137457814,14.4867636755794,23.0027724463324,18.2661433403963,19.3717607613332,17.1865876237214,15.3509986796599,13.173006917463,13.0180226197561,18.2952255250791,24.4912977462697,11.8950761874167,9.78467096655114,22.3952663061996,26.9394539358109,23.1961430379768,23.5969723809311,14.0098167622268,13.3157938278791,10.9141684155238,8.56434564564857,11.3100843960121,16.9113001234978,15.4021628824105,7.19055526923377,12.752144942607,13.541606581297,16.1217715810119,22.6212054967263,16.9061603509621,24.641810669283,20.3650111526007,19.9185728488505,19.9827457312653,17.2703873136135,16.9558626068685,11.2291419168838,7.11486305009157,16.1839752544611,15.3316016188298,13.9414509678609,12.5773275260872,13.0235666266305,11.9674150337267,13.2340223227373,13.943629502653,10.4333337011471,17.2521847832825,16.0020607497456,13.7296576170407,9.09283960609602,9.14926808961752,8.68398338454061,20.6923572986597,13.8328730592454,24.4447464663039,19.5206848641466,22.2955735874077,27.303519963016,23.8043640886014,16.1960927721973,26.4827042098401,28.568944964692,25.3533082165404,20.3190510247515,24.1758974612254,20.9741134943192,24.1266054302836,14.6854534631052,10.8188140064188,11.0374698521893,16.0550589987792,15.4719426301708,17.2131692645509,7.82659874333556,12.6203287766503,13.6653560503823,16.8030250231583,15.5329718669159,16.4871018820972,15.0030561318081,11.7395103485719,15.7818163272108,19.3691011193797,23.4564560987919,21.2910127812403,14.2452482933804,24.1072699843293,23.5907275850726,11.9470624505967,12.1390318077491,12.9999129494843,15.4656165399836,7.67784921490009,16.908933136916,14.2135561242522,13.0872142611902,12.83390562185,15.1697643809192,12.6502330289999,6.18813259489121,24.8520912200265,19.2665370613502,10.7367707539686,15.8609405923378,22.5222096725687,14.4478742257677,15.9612549984057,11.8741330154694,15.7230044402686,15.8874053147865,11.467476698858,26.0520279647538,25.5113794179531,21.8332788239924,17.5477345684611,18.3837807714469,12.2421951384537,15.7611506708933,14.8657666294132,15.8917888331681,21.6677597022563,16.1996873024034,18.8638034255015,17.1583629904892,11.3885548095883,16.5142713741916,13.4053974590291,15.2747298882418,19.4546636052398,24.8049749894755,19.6569720295678,19.2361232333311,15.2853794622324,17.262636337257,18.1011068038486,13.8730649251536,11.5357326229696,16.776161453347,430.097712216037,23.7731308209926,14.8912641411388,21.5840819061893,11.7535439364735,21.1195156863473,20.0680878084239,18.8796358023728,20.9718688851422,149.298986670472,244.24944530667,22.7528006852288,13.7853146397312,12.7361586884386,13.7716072356463,14.6801890447335,18.4773659946576,15.385017538556,23.6303243479324,21.8087531887999,23.243076029775,21.3751512490102,22.1229389279238,21.3590288441531,26.7648105995793,16.7780483875256,9.76738194845885,5.38283139656854,8.89788466729616,18.7393906211225,16.3283753642528,20.1466786693992,15.8632600518509,16.551879433167,8.471277639256,12.4287813856938,12.0308057822273,10.8267504876523,6.85082519770642,12.0863023582352,6.07520250208625,16.6618845192962,9.9691329976525,10.8729665467882,16.7097629610524,28.7297908848742,20.8294999020044,18.9623239313269,17.3978924981225,15.0751676929012,18.4464784075341,24.5181718114284,15.7250412699989,20.4684741528676,19.5179060915485,19.4285131627658,23.5976598824104,24.7777339806844,22.8018811753785,20.0043350338891,19.4685667587357,24.4994709988905,17.7196937345422,20.9022466590844,23.6579784145937,20.9421451268018,23.8436189947321,22.0926553281139,21.0805012130341,21.6613396202692,18.2927972872773,19.4671586464004,25.6669775168679,17.3954104213899,16.371632501136,17.9278157923526,23.3261694606723,24.9448314309405,22.7629800957747,11.9909077410214,18.4805970671873,18.2640395941054,15.6856432296452,13.0148937280514,11.1296561097802
|phase1_expression=22.4208385946712,6.97950815278722,3.18499467572675,9.98131897312539,11.520601788766,8.89760141133016,7.00837921786577,29.569241068121,5.77233760821834,4.21316147379588,19.3476304094821,16.5128369120346,26.3649124094057,26.3135411281182,10.3264026162855,16.8054471933556,7.69518065940961,22.7132759057931,23.1723392793699,18.6731446791133,76.5389611359628,12.5106598513115,8.8807928307238,9.5995453676044,9.40578052375397,2.29692785646008,6.8921919385452,6.46413698057667,9.88121781173144,10.837295579677,9.09095093686749,6.98533740805594,6.1506478758457,0,9.53210345179206,11.137721239019,12.4543307320045,22.600708059793,22.6587249911902,37.1701858221397,28.2351114254887,25.9557284284209,33.0147040061184,11.330713617802,12.4693625400003,12.4811791469943,6.25913075478431,5.01457859675027,3.95435128922049,3.88859798148567,8.39918529752175,5.75010257459886,18.9594344845242,15.9579671242496,13.779845764841,6.17422646486273,10.0286703978565,7.73508138416164,12.7459370341547,10.5798195854407,9.50747105259269,4.74382344896785,6.22506357277798,1.7997994345628,1.97773272513395,4.2628806896766,2.99600110518405,4.2264013585371,18.8715094401429,13.6355997715008,13.0401476037857,7.42692559449889,9.27647871996777,19.3535462759627,21.3735400370667,18.3843757322004,7.70811166995721,13.2794831608595,9.5236050618871,14.3756053625911,15.8273623432169,17.1901412283731,12.8424179540635,8.4414391504752,12.3766580699216,10.606629077052,15.8032565687004,15.2847545576746,27.8672391466117,19.2707478272303,24.9283460283443,9.46466264679525,0.679971333707751,3.77792234146472,1.29955283489534,5.82434953226536,12.6399978118577,21.9855116125695,14.2882302531578,12.3668851078619,20.703982707172,14.115912515575,7.64415719119937,0,6.27824018932521,4.56047757855178,4.04419556011827,19.4112595522402,45.8320054055494,12.7660239595749,14.3992821215893,13.7009465240464,13.3756988408514,15.0722640552623,19.519725384527,10.3046604890334,13.3485282576562,16.7735254027098,19.4614321428972,18.4414208940046,12.5879665522424,15.0311328471919,13.0474232852686,20.7874365878198,19.6879904404648,10.9846533739694,15.9354115592874,20.9965955847693,14.7401463404755,17.5255048103643,20.5875271268382,22.1151659718641,15.8180131374972,14.8314965251592,15.1685272528479,12.4925772562173,24.7469654156269,14.4312085907708,20.7232661915613,14.7309299120532,22.1204753036596,17.9323641458109,22.8678904852794,26.0719334855787,24.8333221902347,27.1601087003882,21.7388000978571,20.4375662883822,12.9340795759705,23.2600478606418,25.1610107554447,17.9740500590611,27.5266776733342,26.4671646556847,25.1054206417691,22.6899064173082,21.7686088067103,20.0731367549478,15.9131559661532,18.0199422105887,15.4787199587523,18.7264543919455,21.0702814670837,18.495837784256,23.4486011588815,17.9051137457814,14.4867636755794,23.0027724463324,18.2661433403963,19.3717607613332,17.1865876237214,15.3509986796599,13.173006917463,13.0180226197561,18.2952255250791,24.4912977462697,11.8950761874167,9.78467096655114,22.3952663061996,26.9394539358109,23.1961430379768,23.5969723809311,14.0098167622268,13.3157938278791,10.9141684155238,8.56434564564857,11.3100843960121,16.9113001234978,15.4021628824105,7.19055526923377,12.752144942607,13.541606581297,16.1217715810119,22.6212054967263,16.9061603509621,24.641810669283,20.3650111526007,19.9185728488505,19.9827457312653,17.2703873136135,16.9558626068685,11.2291419168838,7.11486305009157,16.1839752544611,15.3316016188298,13.9414509678609,12.5773275260872,13.0235666266305,11.9674150337267,13.2340223227373,13.943629502653,10.4333337011471,17.2521847832825,16.0020607497456,13.7296576170407,9.09283960609602,9.14926808961752,8.68398338454061,20.6923572986597,13.8328730592454,24.4447464663039,19.5206848641466,22.2955735874077,27.303519963016,23.8043640886014,16.1960927721973,26.4827042098401,28.568944964692,25.3533082165404,20.3190510247515,24.1758974612254,20.9741134943192,24.1266054302836,14.6854534631052,10.8188140064188,11.0374698521893,16.0550589987792,15.4719426301708,17.2131692645509,7.82659874333556,12.6203287766503,13.6653560503823,16.8030250231583,15.5329718669159,16.4871018820972,15.0030561318081,11.7395103485719,15.7818163272108,19.3691011193797,23.4564560987919,21.2910127812403,14.2452482933804,24.1072699843293,23.5907275850726,11.9470624505967,12.1390318077491,12.9999129494843,15.4656165399836,7.67784921490009,16.908933136916,14.2135561242522,13.0872142611902,12.83390562185,15.1697643809192,12.6502330289999,6.18813259489121,24.8520912200265,19.2665370613502,10.7367707539686,15.8609405923378,22.5222096725687,14.4478742257677,15.9612549984057,11.8741330154694,15.7230044402686,15.8874053147865,11.467476698858,26.0520279647538,25.5113794179531,21.8332788239924,17.5477345684611,18.3837807714469,12.2421951384537,15.7611506708933,14.8657666294132,15.8917888331681,21.6677597022563,16.1996873024034,18.8638034255015,17.1583629904892,11.3885548095883,16.5142713741916,13.4053974590291,15.2747298882418,19.4546636052398,24.8049749894755,19.6569720295678,19.2361232333311,15.2853794622324,17.262636337257,18.1011068038486,13.8730649251536,11.5357326229696,16.776161453347,430.097712216037,23.7731308209926,14.8912641411388,21.5840819061893,11.7535439364735,21.1195156863473,20.0680878084239,18.8796358023728,20.9718688851422,149.298986670472,244.24944530667,22.7528006852288,13.7853146397312,12.7361586884386,13.7716072356463,14.6801890447335,18.4773659946576,15.385017538556,23.6303243479324,21.8087531887999,23.243076029775,21.3751512490102,22.1229389279238,21.3590288441531,26.7648105995793,16.7780483875256,9.76738194845885,5.38283139656854,8.89788466729616,18.7393906211225,16.3283753642528,20.1466786693992,15.8632600518509,16.551879433167,8.471277639256,12.4287813856938,12.0308057822273,10.8267504876523,6.85082519770642,12.0863023582352,6.07520250208625,16.6618845192962,9.9691329976525,10.8729665467882,16.7097629610524,28.7297908848742,20.8294999020044,18.9623239313269,17.3978924981225,15.0751676929012,18.4464784075341,24.5181718114284,15.7250412699989,20.4684741528676,19.5179060915485,19.4285131627658,23.5976598824104,24.7777339806844,22.8018811753785,20.0043350338891,19.4685667587357,24.4994709988905,17.7196937345422,20.9022466590844,23.6579784145937,20.9421451268018,23.8436189947321,22.0926553281139,21.0805012130341,21.6613396202692,18.2927972872773,19.4671586464004,25.6669775168679,17.3954104213899,16.371632501136,17.9278157923526,23.3261694606723,24.9448314309405,22.7629800957747,11.9909077410214,18.4805970671873,18.2640395941054,15.6856432296452,13.0148937280514,11.1296561097802
|short_description=p1@Fam48a
|short_description=p1@Fam48a
}}
}}

Revision as of 19:11, 18 April 2012

Short description:p1@Fam48a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Fam48a_5end
Coexpression cluster:NA
Association with transcript: -21bp_to_uc008pfk.1_5end
EntrezGene:Fam48a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Fam48a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G722.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.98
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.01
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E929.57
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E619.35
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F116.51
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E426.36
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E826.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A316.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A222.71
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A423.17
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A618.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A376.54
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H212.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.88
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.41
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I26.46
Ileum epithelium, pool1.CNhs13199.10252-104B99.88
Ileum epithelium, pool2.CNhs13232.10253-104C110.84
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.09
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.53
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.14
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F712.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G822.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H122.66
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H337.17
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G928.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H225.96
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H433.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D811.33
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.47
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.48
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A218.96
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.96
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.78
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.17
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.03
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.74
Mouse Granule cells, donor1.CNhs12131.11713-123C312.75
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D518.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.64
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D913.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.28
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D219.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F221.37
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D618.38
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.38
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D817.19
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.28
Mouse Schwann, donor1.CNhs12507.11728-123D927.87
Mouse Schwann, donor2.CNhs12573.11746-123F919.27
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G324.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I721.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E314.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.37
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G620.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.41
accessory axillary lymph node, adult.CNhs10475.1063-29H945.83
adrenal gland, adult.CNhs10508.49-24D712.77
adrenal gland, embryo E14.CNhs11038.406-44C514.40
adrenal gland, embryo E16.CNhs11004.1254-43D613.70
adrenal gland, embryo E17.CNhs11043.1263-45I113.38
adrenal gland, embryo E18.CNhs11026.1262-18F515.07
adrenal gland, neonate N00.CNhs11191.1311-23C119.52
adrenal gland, neonate N25.CNhs11223.1377-27I310.30
amnion, adult pregnant day17.5.CNhs10488.583-22A813.35
aorta, adult.CNhs10498.46-23H116.77
bone (os femoris), adult.CNhs10483.56-12G219.46
bone (os femoris), neonate N02.CNhs11227.1985-43F518.44
bone (os femoris), neonate N16.CNhs11225.1525-43A612.59
bone (os femoris), neonate N20.CNhs11195.1350-25C315.03
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B220.79
cerebellum, neonate N30.CNhs11135.1395-42I219.69
colon, adult.CNhs10468.36-18H710.98
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C715.94
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D121.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D414.74
corpora quadrigemina, adult.CNhs10501.16-22A417.53
corpus striatum, adult.CNhs10487.19-21D820.59
corpus striatum, neonate N00.CNhs11226.630-43F122.12
cortex, adult.CNhs10473.12-14D515.82
cortex, neonate N30.CNhs11107.1392-42F214.83
diencephalon, adult.CNhs10482.20-12F215.17
diencephalon, neonate N30.CNhs11201.1388-42B212.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B124.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.43
epididymis, adult.CNhs10490.58-23B220.72
eyeball, adult.CNhs10484.31-12G414.73
eyeball, embryo E12.CNhs11016.345-16C622.12
eyeball, embryo E14.CNhs10521.399-16E217.93
eyeball, embryo E15.CNhs10593.426-16C922.87
eyeball, embryo E17.CNhs11023.1261-18D426.07
eyeball, neonate N00.CNhs11207.633-15C624.83
eyeball, neonate N01.CNhs11140.1532-43E727.16
eyeball, neonate N02.CNhs11205.1551-44G821.74
eyeball, neonate N16.CNhs11188.777-19A220.44
forelimb, embryo E11.CNhs10596.335-25E212.93
forelimb, embryo E12.CNhs10600.359-14H223.26
forelimb, embryo E13.CNhs10589.384-1E225.16
forelimb, embryo E14.CNhs10577.413-26A817.97
forelimb, embryo E15.CNhs11007.437-20E727.53
forelimb, embryo E17.CNhs10598.1517-43C426.47
forelimb, embryo E18.CNhs11008.1520-43B525.11
gonad, embryo E13.CNhs11044.1564-45I622.69
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C821.77
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D220.07
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D515.91
heart, embryo E11.CNhs10586.331-24E918.02
heart, embryo E12.CNhs11015.353-12F515.48
heart, embryo E13.CNhs11013.376-3I918.73
heart, embryo E14.CNhs10597.403-26D421.07
heart, embryo E15.CNhs11017.431-16C818.50
heart, embryo E16.CNhs11021.457-17C623.45
heart, embryo E17.CNhs11025.479-18E517.91
heart, embryo E18.CNhs11030.1283-20G314.49
heart, neonate N00.CNhs11213.639-21E323.00
heart, neonate N03.CNhs11221.1349-25I218.27
heart, neonate N10.CNhs11118.749-24G119.37
heart, neonate N16.CNhs11209.782-15G117.19
heart, neonate N20.CNhs11127.821-26I615.35
heart, neonate N25.CNhs11196.1351-25D313.17
heart, neonate N30.CNhs11202.1390-42D213.02
hippocampus, adult.CNhs10478.13-16E818.30
hippocampus, neonate N00.CNhs11228.627-43G124.49
intestinal mucosa, adult.CNhs10506.860-29I311.90
intestine, adult.CNhs10496.178-9A39.78
intestine, embryo E12.CNhs11019.1251-16I522.40
intestine, embryo E13.CNhs11010.381-16D526.94
intestine, embryo E15.CNhs10602.976-16D823.20
intestine, embryo E16.CNhs10585.463-22H423.60
intestine, embryo E17.CNhs10582.482-18D314.01
intestine, embryo E18.CNhs10526.1289-20F713.32
intestine, neonate N00.CNhs11126.644-26D110.91
intestine, neonate N01.CNhs11192.1322-23E98.56
intestine, neonate N06.CNhs11102.688-20B811.31
intestine, neonate N07.CNhs11095.720-20F216.91
intestine, neonate N10.CNhs11098.755-23A515.40
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E312.75
intestine, neonate N30.CNhs11131.1384-42G113.54
kidney, embryo E14.CNhs10606.411-4I916.12
kidney, embryo E15.CNhs10997.434-16F822.62
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I224.64
kidney, embryo E18.CNhs11001.1288-20C720.37
kidney, neonate N00.CNhs11214.646-21G719.92
kidney, neonate N10.CNhs11206.758-6D519.98
kidney, neonate N20.CNhs11113.832-19I117.27
kidney, neonate N25.CNhs11122.1353-25F316.96
kidney, neonate N30.CNhs11203.1385-42H111.23
liver, adult pregnant day01.CNhs10466.508-5B27.11
liver, embryo E12.CNhs10601.355-15F816.18
liver, embryo E13.CNhs10524.378-3H615.33
liver, embryo E14.CNhs10594.409-16E113.94
liver, embryo E15.CNhs10520.433-16D712.58
liver, embryo E16.CNhs10523.462-17F513.02
liver, embryo E17.CNhs10510.481-18A311.97
liver, embryo E18.CNhs10579.499-43G413.23
liver, neonate N00.CNhs11117.641-24F413.94
liver, neonate N03.CNhs11123.1345-25G210.43
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H216.00
liver, neonate N10.CNhs11115.751-24B913.73
liver, neonate N20.CNhs11220.823-25A39.09
liver, neonate N25.CNhs11198.1368-26H19.15
liver, neonate N30.CNhs11106.1382-42D18.68
lung, adult.CNhs10474.28-22B120.69
lung, embryo E12.CNhs10522.354-16G213.83
lung, embryo E14.CNhs10604.404-26F824.44
lung, embryo E15.CNhs11020.432-17C519.52
lung, embryo E16.CNhs10998.458-17B622.30
lung, embryo E17.CNhs10605.480-44A627.30
lung, embryo E18.CNhs10583.1287-20I623.80
lung, neonate N00.CNhs11224.640-42C616.20
lung, neonate N06.CNhs11212.683-20E526.48
lung, neonate N07.CNhs11111.715-19A328.57
lung, neonate N10.CNhs11219.750-23E625.35
lung, neonate N20.CNhs11109.822-18A420.32
lung, neonate N25.CNhs11119.1359-25C724.18
lung, neonate N30.CNhs11133.1394-42H220.97
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A124.13
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.69
mammary gland, adult lactating day02.CNhs10480.595-22B610.82
mammary gland, adult pregnant day19.CNhs10476.588-5H211.04
medulla oblongata, adult.CNhs10477.17-12C216.06
medulla oblongata, neonate N30.CNhs11200.1396-42A315.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C717.21
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.83
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.62
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.67
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.53
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.49
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.78
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D619.37
olfactory brain, adult.CNhs10489.18-22I923.46
ovary, adult.CNhs10507.91-2I721.29
ovary, embryo E18.CNhs11040.505-44H714.25
ovary, neonate N00.CNhs11217.1299-22I424.11
oviduct, adult pregnant day01.CNhs10500.988-6G623.59
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F412.14
pancreas, embryo E15.CNhs11042.1556-45F213.00
pancreas, embryo E16.CNhs11003.460-26E515.47
pancreas, embryo E17.CNhs10599.1558-45G37.68
pancreas, embryo E18.CNhs10580.1535-43I716.91
pancreas, neonate N00.CNhs11105.645-26G914.21
pancreas, neonate N01.CNhs11138.1531-43D713.09
pancreas, neonate N02.CNhs11139.1539-43D812.83
pancreas, neonate N16.CNhs11136.787-43B615.17
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G824.85
pituitary gland, embryo E12.CNhs11018.346-16E619.27
pituitary gland, embryo E13.CNhs11009.370-44C710.74
pituitary gland, embryo E14.CNhs11037.398-44A515.86
pituitary gland, embryo E15.CNhs10592.427-16B922.52
pituitary gland, embryo E16.CNhs11036.449-43F614.45
pituitary gland, embryo E17.CNhs11039.1265-44F515.96
pituitary gland, neonate N00.CNhs11190.1308-22E911.87
placenta, adult pregnant day10.CNhs10472.539-13I715.72
placenta, adult pregnant day17.CNhs10464.577-18G315.89
prostate, adult.CNhs10470.859-1F811.47
skin, adult.CNhs10492.30-1C326.05
skin, neonate N00.CNhs11124.650-25G425.51
skin, neonate N03.CNhs11215.662-22H321.83
skin, neonate N06.CNhs11097.693-20I517.55
skin, neonate N10.CNhs11108.762-6C418.38
small intestine, neonate N16.CNhs11114.790-21I112.24
spinal cord, adult.CNhs10505.24-13C915.76
spleen, adult.CNhs10465.25-2G214.87
spleen, embryo E16.CNhs11035.461-43C115.89
spleen, embryo E18.CNhs11011.1271-21F221.67
spleen, neonate N10.CNhs11116.752-24D116.20
spleen, neonate N20.CNhs11112.824-19H118.86
spleen, neonate N25.CNhs11099.1354-25G317.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C916.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D313.41
stomach, adult.CNhs10503.33-1H615.27
stomach, embryo E12.CNhs10588.356-43E319.45
stomach, embryo E15.CNhs10603.1252-16G824.80
stomach, embryo E16.CNhs11022.459-17D419.66
stomach, embryo E17.CNhs11006.1035-18D519.24
stomach, embryo E18.CNhs10999.1286-20C615.29
stomach, neonate N03.CNhs11193.1340-24B817.26
stomach, neonate N07.CNhs11210.718-18A918.10
stomach, neonate N25.CNhs11104.1355-25E413.87
stomach, neonate N30.CNhs11134.1386-42I111.54
submandibular gland, adult.CNhs10469.59-29C116.78
testis, adult.CNhs10504.57-7G5430.10
testis, embryo E13.CNhs11031.389-23F523.77
testis, embryo E15.CNhs11034.443-27C514.89
testis, embryo E16.CNhs11033.470-26G521.58
testis, embryo E17.CNhs11029.486-18I511.75
testis, embryo E18.CNhs11027.503-18G521.12
testis, neonate N00.CNhs11189.1300-22B720.07
testis, neonate N07.CNhs11222.726-26I418.88
testis, neonate N10.CNhs11204.763-44D920.97
testis, neonate N20.CNhs11110.839-18H3149.30
testis, neonate N30.CNhs11130.1391-42E2244.25
thymus, adult.CNhs10471.38-12B522.75
thymus, embryo E14.CNhs11041.402-44I413.79
thymus, embryo E15.CNhs11005.430-45I212.74
thymus, embryo E16.CNhs11002.456-26C513.77
thymus, embryo E17.CNhs10581.478-18C114.68
thymus, embryo E18.CNhs10595.1273-19G418.48
thymus, neonate N02.CNhs11181.1541-43F815.39
thymus, neonate N03.CNhs11137.2104-43C723.63
thymus, neonate N06.CNhs11197.681-26C421.81
thymus, neonate N07.CNhs11211.713-19D323.24
thymus, neonate N10.CNhs11194.748-24E421.38
thymus, neonate N20.CNhs11186.820-7A222.12
thymus, neonate N25.CNhs11125.1362-25G721.36
thymus, neonate N30.CNhs11132.1393-42G226.76
tongue, adult.CNhs10499.32-1B416.78
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H39.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.38
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.90
urinary bladder, adult.CNhs10481.879-12E418.74
uterus, adult pregnant day19.CNhs10497.590-15F516.33
uterus, adult.CNhs10509.92-27E520.15
vagina, adult.CNhs10502.89-27D515.86
vesicular gland, adult.CNhs10491.51-27F816.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.83
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I816.71
whole body, embryo E12.CNhs10587.857-27C928.73
whole body, embryo E13.CNhs10512.372-23H220.83
whole body, embryo E14.5.CNhs10578.420-27D218.96
whole body, embryo E14.CNhs10519.395-14B117.40
whole body, embryo E16.CNhs10514.453-14F215.08
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G518.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G524.52
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.73
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.47
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G519.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.43
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G523.60
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G524.78
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G522.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.47
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G524.50
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G517.72
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.90
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G523.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G520.94
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G523.84
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G522.09
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G521.08
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G521.66
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G518.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G525.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.40
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G523.33
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G524.94
whole body, embryo E17.5.CNhs10513.490-9F922.76
whole body, embryo E17.CNhs10517.475-3I511.99
whole body, embryo E18.CNhs10516.493-3B318.48
whole body, neonate N00.CNhs10525.657-19C218.26
whole body, neonate N01.CNhs10576.659-23C615.69
whole body, neonate N06.CNhs10515.692-21D113.01
whole body, neonate N10.CNhs10518.761-6B411.13





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:54496727..54496758,%2B&oldid=937607"