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FFCP PHASE1:Mm9::chr5:65726836..65726918,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:65726836..65726918,-
|short_description=p1@Rfc1
|description=CAGE_peak_1_at_Rfc1_5end
|association_with_transcript=0bp_to_ENSMUST00000031092,ENSMUST00000163403,ENSMUST00000172660,ENSMUST00000172732,ENSMUST00000173451,ENSMUST00000173994,NM_011258,uc008xni.2,uc008xnj.2,uc008xnk.2,uc008xnl.2_5end
|EntrezGene=19687
|EntrezGene=19687
|HGNC=
|HGNC=
|UniProt=G3X8Z6,E9PX26,G3UWX1,Q5U4B1,G3UZ76,P35601
|UniProt=G3X8Z6,E9PX26,G3UWX1,Q5U4B1,G3UZ76,P35601
|association_with_transcript=0bp_to_ENSMUST00000031092,ENSMUST00000163403,ENSMUST00000172660,ENSMUST00000172732,ENSMUST00000173451,ENSMUST00000173994,NM_011258,uc008xni.2,uc008xnj.2,uc008xnk.2,uc008xnl.2_5end
|description=CAGE_peak_1_at_Rfc1_5end
|id=chr5:65726836..65726918,-
|ontology_enrichment_disease=
|phase1_expression=28.1861970904437,2.44282785347553,1.36499771816861,6.65421264875026,4.00716583957078,23.6709773395765,24.2957146219347,30.6022276556536,6.05391505252167,6.08567768437183,16.4369249496485,17.549874978974,31.6721350372731,35.055581370018,45.9691471305615,51.6311931844056,37.7763414189199,56.1522654337663,61.0159229545538,32.2536135366503,43.5421645573477,49.2483117956391,51.9787580386481,15.0392877425802,10.3234176480227,4.01962374880514,6.8921919385452,11.4199753323521,19.0023419456374,18.3981994724749,13.7472916606289,11.4305521222734,16.6067492647834,0,30.6182716936351,23.4390849955474,28.9920485892564,50.2237956884289,42.973443948809,50.7818031654584,41.764435650202,31.4200923080885,47.5800145970531,27.697299954627,30.2103255034153,30.6523076110008,7.04152209913235,7.84890562969608,4.83309602015838,8.74934545834275,8.53917171914711,2.87505128729943,48.992520968859,26.8383992544197,40.3312558970957,21.8670520630555,32.0917452731408,19.0798674142654,8.49729135610311,12.6957835025288,6.97214543856797,3.72728985276045,3.55717918444456,9.89889689009539,6.92206453796882,6.3943210345149,6.89080254192331,9.60545763303886,21.1526809109294,9.18040380655497,13.6711224878398,10.5690864229407,8.83474163806454,15.8013130987291,15.7186572469908,11.9498442259303,23.1243350098716,27.4527776883154,27.4955694528676,9.10015385338338,9.14876436024097,8.33461392890816,13.1216009530649,23.0732670112989,26.8924916087186,18.2669722993674,24.6303007782448,15.2847545576746,29.230310626609,40.2796415369167,34.4938741554997,12.0459342777394,7.47968467078526,20.5087212822371,20.1430689408777,23.2973981290615,33.2853275712252,28.6322941931137,25.9786004602869,19.4336765980687,21.5490432258321,23.0987659345772,53.5091003383956,28.4426681261332,22.9480503471887,21.5355885653834,23.25412447068,27.4041311325744,104.869842877105,35.4776712364931,36.9523746011869,33.7956680926477,36.4372485664572,39.6400544653397,44.4485312972964,34.8096457983201,23.2363269670311,49.16378135277,40.6920853896942,46.4270859349064,49.0268170982074,52.8514025917392,16.775258509631,35.4264764383972,29.7414323675106,24.7793343552334,52.7186547826049,39.5935802455649,45.4911412921572,25.9137806170343,21.9600289352941,17.4659549436882,30.0716073932638,24.8043993610421,30.7526305948149,26.76980840618,50.4104851059066,44.7865094196335,36.8975227313165,37.0377666360194,66.1011850250535,36.0946303960553,50.9575827349138,46.8691983469074,45.1762354364817,47.5301902256793,31.5774811766286,36.9945820156792,56.6943821413375,72.6167347844426,64.7500136923332,49.9766269934871,69.5118123063995,57.1133553096353,52.2686626476176,61.3025541800959,54.7726286104323,46.8373190948782,43.4770154075257,46.3961730479524,49.9540507759735,44.2952671194097,54.4512891845984,44.6654806066607,51.9880170430465,46.5067889500816,39.1679166043444,38.1822669540644,45.5830784260341,37.4301818100337,34.9406569142638,34.0645970701024,39.5190207523891,37.5777972529041,27.5479832619007,24.6971069710283,14.5384264512871,25.9161555330273,61.6403044046826,60.381534683714,63.0161885865036,44.168691892512,37.1371333220933,32.7188076913602,27.5226855695817,28.6576181219779,25.8875265064278,32.2309484706664,33.9237511587269,32.357498711552,33.0691216308282,25.8883655230677,19.7254616991205,61.922693834473,55.2267904798094,55.5968125017708,50.6215991507503,43.0633934126556,38.8904703314182,38.6738587706558,32.3417379353232,24.8028299482819,19.5658733877518,60.23108316351,48.5500717929611,62.5116672429893,64.7123787229324,46.5471918322164,32.3374831762403,40.2774592431135,38.7503191992335,41.4587733914003,81.9478777205921,41.3076451912039,31.5158049845706,36.3713584243841,37.1352645990358,17.3679667690812,41.7542209776527,50.2152241191785,64.8600606239263,64.3333875087963,59.1419425687025,50.5868897474284,36.1826334146741,27.9041116436652,51.3890569786183,47.6149082744866,41.7771493882616,34.7390227197365,35.7457912462404,33.8478797080737,40.7136466636035,34.8099637643974,48.6846630288846,37.2514607511389,28.4174544278392,29.3029216480508,41.8034110710522,25.4995636476417,40.7005603046971,36.701241963884,39.637905182835,37.9960388744558,39.2125666385014,37.3661020641259,41.2906915708392,34.1939353756235,29.2512955680427,39.2012006034605,49.679029822894,43.4480072948103,56.3588879363373,39.5928295134085,25.2215762845929,44.4288564163616,38.3950917345234,39.0412515094709,23.328849537581,43.3483558600938,27.1349707826632,46.1687836436432,47.7706487035527,40.7687417737203,29.5172104009997,25.7838858120467,38.1292358444243,54.558511491487,23.4139217646786,44.3677662515396,42.9163365414302,36.2088699732203,38.6690198414984,15.22324745573,34.4967410853654,22.4541995115649,32.8587313101893,51.2796246648003,51.0227588359062,54.4022582851966,37.1247989849754,39.0655341393246,27.399198643206,32.6348531538497,55.7039071401,49.9456220470998,52.7804403003678,79.3031203989749,94.5924055829494,60.1686595533155,50.1436368481873,55.7006780248159,51.6867902028545,18.1387417422872,64.0580387001799,57.742728664025,52.706606321039,51.6448091155738,45.2010506954588,50.3044012015381,38.9297776466332,26.437350140387,27.6079893111519,45.9791091684325,142.050620548416,63.9930817068229,47.1556697802728,55.0296863013655,48.6932534511046,57.7829949178461,57.2703324591279,60.1544257979049,70.8849168317805,87.9366199806662,97.6421721214164,55.3019461099312,40.747768273323,51.6636114539081,62.751757498275,71.6106782669926,71.7239690760366,68.6316016759022,78.7185179840497,95.716194550844,81.7699035408148,74.5105508161251,72.2162896281565,64.2695102157401,62.646019569321,32.6491752405904,62.6000388514862,63.4276966228993,53.8909618528692,42.6949002811141,30.2168785476403,38.0955378475911,37.7288347179156,30.5958983461572,34.4498623996411,26.6988637174163,28.0718801585304,25.0905646221784,26.0331357512844,37.769694869485,25.6508550088086,37.8269810708345,29.4542565839733,21.7459330935764,71.7170571806661,44.6907858209155,45.2444055248456,50.8093038672735,44.2283773145043,38.423293266053,34.0037493536471,39.9708011043455,37.2266283126506,42.2004343645542,38.5288535833164,39.4229053496899,46.5398292125316,42.3206257396186,45.0868431301564,39.5323763764951,39.7483237990854,41.861300840624,33.7910438658711,47.1036544430071,42.1729180434061,40.996911222807,50.0715998889374,42.4411536566399,42.2551118064834,38.8381050222795,40.4270820048827,52.0878028646929,44.5437493414427,47.13595081925,39.2681909991016,36.7421719260852,42.9692595328174,38.4243366141196,37.2309759193603,18.9856039232839,40.0023050441648,35.4537239179692,36.1534947610114,31.5445729340907,30.1428186306548
|phase1_expression=28.1861970904437,2.44282785347553,1.36499771816861,6.65421264875026,4.00716583957078,23.6709773395765,24.2957146219347,30.6022276556536,6.05391505252167,6.08567768437183,16.4369249496485,17.549874978974,31.6721350372731,35.055581370018,45.9691471305615,51.6311931844056,37.7763414189199,56.1522654337663,61.0159229545538,32.2536135366503,43.5421645573477,49.2483117956391,51.9787580386481,15.0392877425802,10.3234176480227,4.01962374880514,6.8921919385452,11.4199753323521,19.0023419456374,18.3981994724749,13.7472916606289,11.4305521222734,16.6067492647834,0,30.6182716936351,23.4390849955474,28.9920485892564,50.2237956884289,42.973443948809,50.7818031654584,41.764435650202,31.4200923080885,47.5800145970531,27.697299954627,30.2103255034153,30.6523076110008,7.04152209913235,7.84890562969608,4.83309602015838,8.74934545834275,8.53917171914711,2.87505128729943,48.992520968859,26.8383992544197,40.3312558970957,21.8670520630555,32.0917452731408,19.0798674142654,8.49729135610311,12.6957835025288,6.97214543856797,3.72728985276045,3.55717918444456,9.89889689009539,6.92206453796882,6.3943210345149,6.89080254192331,9.60545763303886,21.1526809109294,9.18040380655497,13.6711224878398,10.5690864229407,8.83474163806454,15.8013130987291,15.7186572469908,11.9498442259303,23.1243350098716,27.4527776883154,27.4955694528676,9.10015385338338,9.14876436024097,8.33461392890816,13.1216009530649,23.0732670112989,26.8924916087186,18.2669722993674,24.6303007782448,15.2847545576746,29.230310626609,40.2796415369167,34.4938741554997,12.0459342777394,7.47968467078526,20.5087212822371,20.1430689408777,23.2973981290615,33.2853275712252,28.6322941931137,25.9786004602869,19.4336765980687,21.5490432258321,23.0987659345772,53.5091003383956,28.4426681261332,22.9480503471887,21.5355885653834,23.25412447068,27.4041311325744,104.869842877105,35.4776712364931,36.9523746011869,33.7956680926477,36.4372485664572,39.6400544653397,44.4485312972964,34.8096457983201,23.2363269670311,49.16378135277,40.6920853896942,46.4270859349064,49.0268170982074,52.8514025917392,16.775258509631,35.4264764383972,29.7414323675106,24.7793343552334,52.7186547826049,39.5935802455649,45.4911412921572,25.9137806170343,21.9600289352941,17.4659549436882,30.0716073932638,24.8043993610421,30.7526305948149,26.76980840618,50.4104851059066,44.7865094196335,36.8975227313165,37.0377666360194,66.1011850250535,36.0946303960553,50.9575827349138,46.8691983469074,45.1762354364817,47.5301902256793,31.5774811766286,36.9945820156792,56.6943821413375,72.6167347844426,64.7500136923332,49.9766269934871,69.5118123063995,57.1133553096353,52.2686626476176,61.3025541800959,54.7726286104323,46.8373190948782,43.4770154075257,46.3961730479524,49.9540507759735,44.2952671194097,54.4512891845984,44.6654806066607,51.9880170430465,46.5067889500816,39.1679166043444,38.1822669540644,45.5830784260341,37.4301818100337,34.9406569142638,34.0645970701024,39.5190207523891,37.5777972529041,27.5479832619007,24.6971069710283,14.5384264512871,25.9161555330273,61.6403044046826,60.381534683714,63.0161885865036,44.168691892512,37.1371333220933,32.7188076913602,27.5226855695817,28.6576181219779,25.8875265064278,32.2309484706664,33.9237511587269,32.357498711552,33.0691216308282,25.8883655230677,19.7254616991205,61.922693834473,55.2267904798094,55.5968125017708,50.6215991507503,43.0633934126556,38.8904703314182,38.6738587706558,32.3417379353232,24.8028299482819,19.5658733877518,60.23108316351,48.5500717929611,62.5116672429893,64.7123787229324,46.5471918322164,32.3374831762403,40.2774592431135,38.7503191992335,41.4587733914003,81.9478777205921,41.3076451912039,31.5158049845706,36.3713584243841,37.1352645990358,17.3679667690812,41.7542209776527,50.2152241191785,64.8600606239263,64.3333875087963,59.1419425687025,50.5868897474284,36.1826334146741,27.9041116436652,51.3890569786183,47.6149082744866,41.7771493882616,34.7390227197365,35.7457912462404,33.8478797080737,40.7136466636035,34.8099637643974,48.6846630288846,37.2514607511389,28.4174544278392,29.3029216480508,41.8034110710522,25.4995636476417,40.7005603046971,36.701241963884,39.637905182835,37.9960388744558,39.2125666385014,37.3661020641259,41.2906915708392,34.1939353756235,29.2512955680427,39.2012006034605,49.679029822894,43.4480072948103,56.3588879363373,39.5928295134085,25.2215762845929,44.4288564163616,38.3950917345234,39.0412515094709,23.328849537581,43.3483558600938,27.1349707826632,46.1687836436432,47.7706487035527,40.7687417737203,29.5172104009997,25.7838858120467,38.1292358444243,54.558511491487,23.4139217646786,44.3677662515396,42.9163365414302,36.2088699732203,38.6690198414984,15.22324745573,34.4967410853654,22.4541995115649,32.8587313101893,51.2796246648003,51.0227588359062,54.4022582851966,37.1247989849754,39.0655341393246,27.399198643206,32.6348531538497,55.7039071401,49.9456220470998,52.7804403003678,79.3031203989749,94.5924055829494,60.1686595533155,50.1436368481873,55.7006780248159,51.6867902028545,18.1387417422872,64.0580387001799,57.742728664025,52.706606321039,51.6448091155738,45.2010506954588,50.3044012015381,38.9297776466332,26.437350140387,27.6079893111519,45.9791091684325,142.050620548416,63.9930817068229,47.1556697802728,55.0296863013655,48.6932534511046,57.7829949178461,57.2703324591279,60.1544257979049,70.8849168317805,87.9366199806662,97.6421721214164,55.3019461099312,40.747768273323,51.6636114539081,62.751757498275,71.6106782669926,71.7239690760366,68.6316016759022,78.7185179840497,95.716194550844,81.7699035408148,74.5105508161251,72.2162896281565,64.2695102157401,62.646019569321,32.6491752405904,62.6000388514862,63.4276966228993,53.8909618528692,42.6949002811141,30.2168785476403,38.0955378475911,37.7288347179156,30.5958983461572,34.4498623996411,26.6988637174163,28.0718801585304,25.0905646221784,26.0331357512844,37.769694869485,25.6508550088086,37.8269810708345,29.4542565839733,21.7459330935764,71.7170571806661,44.6907858209155,45.2444055248456,50.8093038672735,44.2283773145043,38.423293266053,34.0037493536471,39.9708011043455,37.2266283126506,42.2004343645542,38.5288535833164,39.4229053496899,46.5398292125316,42.3206257396186,45.0868431301564,39.5323763764951,39.7483237990854,41.861300840624,33.7910438658711,47.1036544430071,42.1729180434061,40.996911222807,50.0715998889374,42.4411536566399,42.2551118064834,38.8381050222795,40.4270820048827,52.0878028646929,44.5437493414427,47.13595081925,39.2681909991016,36.7421719260852,42.9692595328174,38.4243366141196,37.2309759193603,18.9856039232839,40.0023050441648,35.4537239179692,36.1534947610114,31.5445729340907,30.1428186306548
|short_description=p1@Rfc1
}}
}}

Revision as of 18:24, 18 April 2012

Short description:p1@Rfc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rfc1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000031092, ENSMUST00000163403, ENSMUST00000172660, ENSMUST00000172732, ENSMUST00000173451, ENSMUST00000173994, NM_011258, uc008xni.2, uc008xnj.2, uc008xnk.2, uc008xnl.2_5end
EntrezGene:Rfc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rfc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G728.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.65
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I723.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I824.30
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E930.60
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E616.44
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F117.55
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E431.67
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E835.06
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A145.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A351.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A537.78
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A256.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A461.02
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A632.25
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A343.54
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H249.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I951.98
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D115.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D210.32
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I211.42
Ileum epithelium, pool1.CNhs13199.10252-104B919.00
Ileum epithelium, pool2.CNhs13232.10253-104C118.40
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.75
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I311.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G616.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F530.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F623.44
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F728.99
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G850.22
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H142.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H350.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G941.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H231.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H447.58
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D827.70
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D930.21
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B330.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.85
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A248.99
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I926.84
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A140.33
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C121.87
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E132.09
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C519.08
Mouse Granule cells, donor1.CNhs12131.11713-123C38.50
Mouse Granule cells, donor2.CNhs12357.11731-123E312.70
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C86.89
Mouse Microglia, donor2.CNhs12634.11736-123E89.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D521.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.18
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D913.67
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.83
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D215.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.72
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D323.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F327.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D727.50
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.10
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.15
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I626.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.27
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F624.63
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.28
Mouse Schwann, donor1.CNhs12507.11728-123D929.23
Mouse Schwann, donor2.CNhs12573.11746-123F940.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G334.49
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.05
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C820.51
Mouse hepatocyte, donor6.CNhs13090.11822-124F420.14
Mouse hepatocyte, donor8.CNhs13091.11824-124F623.30
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A733.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I728.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E325.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I819.43
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G621.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H123.10
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I853.51
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G122.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G221.54
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G323.25
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B627.40
accessory axillary lymph node, adult.CNhs10475.1063-29H9104.87
adrenal gland, adult.CNhs10508.49-24D735.48
adrenal gland, embryo E14.CNhs11038.406-44C536.95
adrenal gland, embryo E16.CNhs11004.1254-43D633.80
adrenal gland, embryo E17.CNhs11043.1263-45I136.44
adrenal gland, embryo E18.CNhs11026.1262-18F539.64
adrenal gland, neonate N00.CNhs11191.1311-23C144.45
adrenal gland, neonate N25.CNhs11223.1377-27I334.81
amnion, adult pregnant day17.5.CNhs10488.583-22A823.24
aorta, adult.CNhs10498.46-23H149.16
bone (os femoris), adult.CNhs10483.56-12G240.69
bone (os femoris), neonate N02.CNhs11227.1985-43F546.43
bone (os femoris), neonate N16.CNhs11225.1525-43A649.03
bone (os femoris), neonate N20.CNhs11195.1350-25C352.85
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B235.43
cerebellum, neonate N30.CNhs11135.1395-42I229.74
colon, adult.CNhs10468.36-18H724.78
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C752.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D139.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D445.49
corpora quadrigemina, adult.CNhs10501.16-22A425.91
corpus striatum, adult.CNhs10487.19-21D821.96
corpus striatum, neonate N00.CNhs11226.630-43F117.47
cortex, adult.CNhs10473.12-14D530.07
cortex, neonate N30.CNhs11107.1392-42F224.80
diencephalon, adult.CNhs10482.20-12F230.75
diencephalon, neonate N30.CNhs11201.1388-42B226.77
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B150.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A244.79
epididymis, adult.CNhs10490.58-23B236.90
eyeball, adult.CNhs10484.31-12G437.04
eyeball, embryo E12.CNhs11016.345-16C666.10
eyeball, embryo E14.CNhs10521.399-16E236.09
eyeball, embryo E15.CNhs10593.426-16C950.96
eyeball, embryo E17.CNhs11023.1261-18D446.87
eyeball, neonate N00.CNhs11207.633-15C645.18
eyeball, neonate N01.CNhs11140.1532-43E747.53
eyeball, neonate N02.CNhs11205.1551-44G831.58
eyeball, neonate N16.CNhs11188.777-19A236.99
forelimb, embryo E11.CNhs10596.335-25E256.69
forelimb, embryo E12.CNhs10600.359-14H272.62
forelimb, embryo E13.CNhs10589.384-1E264.75
forelimb, embryo E14.CNhs10577.413-26A849.98
forelimb, embryo E15.CNhs11007.437-20E769.51
forelimb, embryo E17.CNhs10598.1517-43C457.11
forelimb, embryo E18.CNhs11008.1520-43B552.27
gonad, embryo E13.CNhs11044.1564-45I661.30
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C854.77
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D246.84
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D543.48
heart, embryo E11.CNhs10586.331-24E946.40
heart, embryo E12.CNhs11015.353-12F549.95
heart, embryo E13.CNhs11013.376-3I944.30
heart, embryo E14.CNhs10597.403-26D454.45
heart, embryo E15.CNhs11017.431-16C844.67
heart, embryo E16.CNhs11021.457-17C651.99
heart, embryo E17.CNhs11025.479-18E546.51
heart, embryo E18.CNhs11030.1283-20G339.17
heart, neonate N00.CNhs11213.639-21E338.18
heart, neonate N03.CNhs11221.1349-25I245.58
heart, neonate N10.CNhs11118.749-24G137.43
heart, neonate N16.CNhs11209.782-15G134.94
heart, neonate N20.CNhs11127.821-26I634.06
heart, neonate N25.CNhs11196.1351-25D339.52
heart, neonate N30.CNhs11202.1390-42D237.58
hippocampus, adult.CNhs10478.13-16E827.55
hippocampus, neonate N00.CNhs11228.627-43G124.70
intestinal mucosa, adult.CNhs10506.860-29I314.54
intestine, adult.CNhs10496.178-9A325.92
intestine, embryo E12.CNhs11019.1251-16I561.64
intestine, embryo E13.CNhs11010.381-16D560.38
intestine, embryo E15.CNhs10602.976-16D863.02
intestine, embryo E16.CNhs10585.463-22H444.17
intestine, embryo E17.CNhs10582.482-18D337.14
intestine, embryo E18.CNhs10526.1289-20F732.72
intestine, neonate N00.CNhs11126.644-26D127.52
intestine, neonate N01.CNhs11192.1322-23E928.66
intestine, neonate N06.CNhs11102.688-20B825.89
intestine, neonate N07.CNhs11095.720-20F232.23
intestine, neonate N10.CNhs11098.755-23A533.92
intestine, neonate N20.CNhs11187.827-18D132.36
intestine, neonate N25.CNhs11121.1352-25E333.07
intestine, neonate N30.CNhs11131.1384-42G125.89
kidney, embryo E14.CNhs10606.411-4I919.73
kidney, embryo E15.CNhs10997.434-16F861.92
kidney, embryo E16.CNhs10584.464-22A555.23
kidney, embryo E17.CNhs11028.483-18I255.60
kidney, embryo E18.CNhs11001.1288-20C750.62
kidney, neonate N00.CNhs11214.646-21G743.06
kidney, neonate N10.CNhs11206.758-6D538.89
kidney, neonate N20.CNhs11113.832-19I138.67
kidney, neonate N25.CNhs11122.1353-25F332.34
kidney, neonate N30.CNhs11203.1385-42H124.80
liver, adult pregnant day01.CNhs10466.508-5B219.57
liver, embryo E12.CNhs10601.355-15F860.23
liver, embryo E13.CNhs10524.378-3H648.55
liver, embryo E14.CNhs10594.409-16E162.51
liver, embryo E15.CNhs10520.433-16D764.71
liver, embryo E16.CNhs10523.462-17F546.55
liver, embryo E17.CNhs10510.481-18A332.34
liver, embryo E18.CNhs10579.499-43G440.28
liver, neonate N00.CNhs11117.641-24F438.75
liver, neonate N03.CNhs11123.1345-25G241.46
liver, neonate N06.CNhs11101.684-20A881.95
liver, neonate N07.CNhs11103.716-20H241.31
liver, neonate N10.CNhs11115.751-24B931.52
liver, neonate N20.CNhs11220.823-25A336.37
liver, neonate N25.CNhs11198.1368-26H137.14
liver, neonate N30.CNhs11106.1382-42D117.37
lung, adult.CNhs10474.28-22B141.75
lung, embryo E12.CNhs10522.354-16G250.22
lung, embryo E14.CNhs10604.404-26F864.86
lung, embryo E15.CNhs11020.432-17C564.33
lung, embryo E16.CNhs10998.458-17B659.14
lung, embryo E17.CNhs10605.480-44A650.59
lung, embryo E18.CNhs10583.1287-20I636.18
lung, neonate N00.CNhs11224.640-42C627.90
lung, neonate N06.CNhs11212.683-20E551.39
lung, neonate N07.CNhs11111.715-19A347.61
lung, neonate N10.CNhs11219.750-23E641.78
lung, neonate N20.CNhs11109.822-18A434.74
lung, neonate N25.CNhs11119.1359-25C735.75
lung, neonate N30.CNhs11133.1394-42H233.85
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A140.71
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A134.81
mammary gland, adult lactating day02.CNhs10480.595-22B648.68
mammary gland, adult pregnant day19.CNhs10476.588-5H237.25
medulla oblongata, adult.CNhs10477.17-12C228.42
medulla oblongata, neonate N30.CNhs11200.1396-42A329.30
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C741.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C225.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E140.70
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E236.70
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E339.64
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D738.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D839.21
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D937.37
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D441.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D534.19
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D629.25
olfactory brain, adult.CNhs10489.18-22I939.20
ovary, adult.CNhs10507.91-2I749.68
ovary, embryo E18.CNhs11040.505-44H743.45
ovary, neonate N00.CNhs11217.1299-22I456.36
oviduct, adult pregnant day01.CNhs10500.988-6G639.59
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F444.43
pancreas, embryo E15.CNhs11042.1556-45F238.40
pancreas, embryo E16.CNhs11003.460-26E539.04
pancreas, embryo E17.CNhs10599.1558-45G323.33
pancreas, embryo E18.CNhs10580.1535-43I743.35
pancreas, neonate N00.CNhs11105.645-26G927.13
pancreas, neonate N01.CNhs11138.1531-43D746.17
pancreas, neonate N02.CNhs11139.1539-43D847.77
pancreas, neonate N16.CNhs11136.787-43B640.77
pancreas, neonate N25.CNhs11094.1555-45E229.52
pancreas, neonate N30.CNhs11182.1548-44H525.78
pituitary gland, adult.CNhs10493.21-1G838.13
pituitary gland, embryo E12.CNhs11018.346-16E654.56
pituitary gland, embryo E13.CNhs11009.370-44C723.41
pituitary gland, embryo E14.CNhs11037.398-44A544.37
pituitary gland, embryo E15.CNhs10592.427-16B942.92
pituitary gland, embryo E16.CNhs11036.449-43F636.21
pituitary gland, embryo E17.CNhs11039.1265-44F538.67
pituitary gland, neonate N00.CNhs11190.1308-22E915.22
placenta, adult pregnant day10.CNhs10472.539-13I734.50
placenta, adult pregnant day17.CNhs10464.577-18G322.45
prostate, adult.CNhs10470.859-1F832.86
skin, adult.CNhs10492.30-1C351.28
skin, neonate N00.CNhs11124.650-25G451.02
skin, neonate N03.CNhs11215.662-22H354.40
skin, neonate N06.CNhs11097.693-20I537.12
skin, neonate N10.CNhs11108.762-6C439.07
small intestine, neonate N16.CNhs11114.790-21I127.40
spinal cord, adult.CNhs10505.24-13C932.63
spleen, adult.CNhs10465.25-2G255.70
spleen, embryo E16.CNhs11035.461-43C149.95
spleen, embryo E18.CNhs11011.1271-21F252.78
spleen, neonate N10.CNhs11116.752-24D179.30
spleen, neonate N20.CNhs11112.824-19H194.59
spleen, neonate N25.CNhs11099.1354-25G360.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C650.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C955.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D351.69
stomach, adult.CNhs10503.33-1H618.14
stomach, embryo E12.CNhs10588.356-43E364.06
stomach, embryo E15.CNhs10603.1252-16G857.74
stomach, embryo E16.CNhs11022.459-17D452.71
stomach, embryo E17.CNhs11006.1035-18D551.64
stomach, embryo E18.CNhs10999.1286-20C645.20
stomach, neonate N03.CNhs11193.1340-24B850.30
stomach, neonate N07.CNhs11210.718-18A938.93
stomach, neonate N25.CNhs11104.1355-25E426.44
stomach, neonate N30.CNhs11134.1386-42I127.61
submandibular gland, adult.CNhs10469.59-29C145.98
testis, adult.CNhs10504.57-7G5142.05
testis, embryo E13.CNhs11031.389-23F563.99
testis, embryo E15.CNhs11034.443-27C547.16
testis, embryo E16.CNhs11033.470-26G555.03
testis, embryo E17.CNhs11029.486-18I548.69
testis, embryo E18.CNhs11027.503-18G557.78
testis, neonate N00.CNhs11189.1300-22B757.27
testis, neonate N07.CNhs11222.726-26I460.15
testis, neonate N10.CNhs11204.763-44D970.88
testis, neonate N20.CNhs11110.839-18H387.94
testis, neonate N30.CNhs11130.1391-42E297.64
thymus, adult.CNhs10471.38-12B555.30
thymus, embryo E14.CNhs11041.402-44I440.75
thymus, embryo E15.CNhs11005.430-45I251.66
thymus, embryo E16.CNhs11002.456-26C562.75
thymus, embryo E17.CNhs10581.478-18C171.61
thymus, embryo E18.CNhs10595.1273-19G471.72
thymus, neonate N02.CNhs11181.1541-43F868.63
thymus, neonate N03.CNhs11137.2104-43C778.72
thymus, neonate N06.CNhs11197.681-26C495.72
thymus, neonate N07.CNhs11211.713-19D381.77
thymus, neonate N10.CNhs11194.748-24E474.51
thymus, neonate N20.CNhs11186.820-7A272.22
thymus, neonate N25.CNhs11125.1362-25G764.27
thymus, neonate N30.CNhs11132.1393-42G262.65
tongue, adult.CNhs10499.32-1B432.65
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H362.60
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F763.43
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G553.89
urinary bladder, adult.CNhs10481.879-12E442.69
uterus, adult pregnant day19.CNhs10497.590-15F530.22
uterus, adult.CNhs10509.92-27E538.10
vagina, adult.CNhs10502.89-27D537.73
vesicular gland, adult.CNhs10491.51-27F830.60
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A134.45
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A226.70
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A328.07
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.03
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A537.77
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A625.65
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A737.83
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A829.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.75
whole body, embryo E11.CNhs11014.324-5I871.72
whole body, embryo E12.CNhs10587.857-27C944.69
whole body, embryo E13.CNhs10512.372-23H245.24
whole body, embryo E14.5.CNhs10578.420-27D250.81
whole body, embryo E14.CNhs10519.395-14B144.23
whole body, embryo E16.CNhs10514.453-14F238.42
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G534.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G539.97
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G537.23
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G542.20
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G538.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G539.42
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G546.54
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G542.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G545.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G539.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G539.75
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G541.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G533.79
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G547.10
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G542.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G541.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G550.07
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G542.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G542.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G538.84
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G540.43
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G552.09
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G544.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G547.14
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G539.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G536.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G542.97
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G538.42
whole body, embryo E17.5.CNhs10513.490-9F937.23
whole body, embryo E17.CNhs10517.475-3I518.99
whole body, embryo E18.CNhs10516.493-3B340.00
whole body, neonate N00.CNhs10525.657-19C235.45
whole body, neonate N01.CNhs10576.659-23C636.15
whole body, neonate N06.CNhs10515.692-21D131.54
whole body, neonate N10.CNhs10518.761-6B430.14





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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