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FFCP PHASE1:Mm9::chr5:137592047..137592089,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:137592047..137592089,-
|short_description=p1@Trim56
|description=CAGE_peak_1_at_Trim56_5end
|association_with_transcript=0bp_to_ENSMUST00000054384,ENSMUST00000152207,ENSMUST00000165237,NM_201373,uc009abp.1,uc009abq.1_5end
|EntrezGene=384309
|EntrezGene=384309
|HGNC=
|HGNC=
|UniProt=Q80VI1,D3YVX5
|UniProt=Q80VI1,D3YVX5
|association_with_transcript=0bp_to_ENSMUST00000054384,ENSMUST00000152207,ENSMUST00000165237,NM_201373,uc009abp.1,uc009abq.1_5end
|description=CAGE_peak_1_at_Trim56_5end
|id=chr5:137592047..137592089,-
|ontology_enrichment_disease=
|phase1_expression=3.52327463630547,35.5954915792148,27.2999543633722,47.1844169638655,38.5689712058687,11.9194283057442,17.7545606852599,51.6493293766305,11.9670413828917,10.5329036844897,20.5461561870606,24.1709641755869,64.2002737242021,55.6867963409013,27.9812199925157,38.6727760714568,32.8794082720229,42.7451234060412,48.6756239300373,44.1365237869951,13.6069264241712,14.4964788753293,12.7987896678078,18.2391361984484,15.1410125504332,24.6919744569459,19.3842898271584,17.6686410802429,19.0023419456374,17.8941392129551,16.6297882991479,10.7955214488137,7.99584223859941,47.5445043046316,7.79899373328441,9.14290549471708,14.4960242946282,30.5528090437943,21.0960543021426,24.6056159667685,38.2350467220159,43.7149110373405,30.1016418879315,16.6183799727762,17.335455238537,8.07605709511399,9.38869613217647,3.92445281484804,3.95435128922049,8.1660557611199,5.73944328663986,2.87505128729943,31.8786951509699,45.6978149467147,56.463758255934,17.4936416504444,15.7593391966316,31.455997628924,0,1.5869729378161,0.633831403506179,3.38844532069132,5.33576877666684,13.9484456178617,28.6771245144423,16.3410426437603,8.08920298399693,8.83702102239575,1.03689612308478,1.89008313664367,0.420649922702764,2.85650984403804,4.19650227808066,0.857435594504678,0.958454710182364,0,6.60695285996332,4.21368215681119,4.76180253094355,0.527545150920775,0.274462930807229,0,3.07101298901519,1.12552522006336,3.51435969886663,2.35702868378934,2.27794689278565,1.1183966749518,10.298762293313,10.5044468548432,43.7695377939533,13.7667820317022,4.75979933595425,18.3499085156858,18.8435161059824,16.1289679355041,14.6062196937022,6.81721290312231,6.49465011507172,6.36011234118612,3.66192891419369,25.6652954828636,35.6727335589304,21.3320010945999,15.5873549528074,12.1612735428047,17.1878311305026,20.3247305899927,33.9208627577795,12.3206975423805,2.60227990149204,4.26251669636998,3.92046345335299,9.94769427647309,8.11362079236363,10.8073268543521,17.5508427091405,14.0261376212314,26.5383165584962,5.3383060482645,8.83366073841574,11.6370060752453,13.0474232852686,2.04946557908083,1.04723353406728,27.3339049073193,10.0644704584973,5.99902730993408,7.75128385145695,1.49790639404823,4.57500602818627,0.879580464790051,1.04294592115366,0.767146371990992,3.74018480207208,2.10913641988085,6.41587992256993,15.0532434438213,5.81262344397452,9.6803253707778,1.04096354370163,0.689706313300419,1.62055916824814,3.31550599238573,3.40182495756639,1.7935920839879,1.68663104207512,4.65666067330228,1.94011193639558,1.89106080167819,1.23165786914764,2.84954452155847,4.44875598760957,3.48252166522167,3.90986059175093,4.17971960318836,9.12877143507205,4.88961023517959,8.24074148247219,2.07125772535502,1.87620847984877,1.62055855314913,3.55117103377815,2.95146347621106,3.85667782218446,3.48800917125612,5.36546802799238,4.55384835231961,2.96207729844265,7.22336841948019,8.75543143095242,12.5731989185786,10.9775057645525,11.0049263383505,2.3131894342054,0.92614151141356,26.4335026387038,25.1228038330367,0.853153002140936,3.0190767341857,4.38149368495117,6.25218926332362,8.89512175379481,11.7939888189787,19.455691523325,11.1995289212327,14.8287773192159,19.6966907320739,17.5467678407208,23.3693046250098,22.9106332867176,18.9184209591649,1.89667900953082,3.77020091612105,0,4.2766778847516,7.17624202520215,4.97964321221262,7.46191138066236,14.0229640580622,10.2049173096894,8.26760998276064,14.2297261001831,6.34011401721157,6.4864468387357,8.99448449539415,10.9544465549792,8.92355491083942,15.786802810448,18.4125527968519,17.9970101720289,6.31491250332587,14.3768206527355,19.7234702264307,17.1620720213008,15.6598904327209,10.0462551572271,11.0962009913574,36.2116252726545,2.27389694124582,3.42226450528254,6.28056817368196,6.57132695207806,12.0604505358107,18.8054476299951,14.2447562936193,14.6600684018758,15.0595988961167,12.118562417969,26.3819936692338,24.6939524068231,27.3386720719057,52.7769493787453,47.8637001760464,11.3105782794378,10.7615331058846,2.24770825982909,1.75817529888305,6.06559297893699,5.80683132570058,7.57219726599016,5.85658116444958,6.89354872744957,6.69112634267146,8.46634961513098,7.35998980050964,6.8817819284732,7.89090816360542,6.7198922250909,2.89189184779626,9.509985708954,4.09550888434687,5.21238269931443,13.6925202067204,10.619611067197,3.64170954232472,3.32555912661226,5.28094223316515,4.72483028609236,5.53383266299069,11.62927319257,7.63420831902762,8.19943970284859,10.4292130118819,11.5960469432499,8.25084345985495,22.8094535855038,1.98067203434441,1.81102157295856,3.00071849044229,5.14286677562593,6.24290861607247,6.91105886528908,9.13394847343798,8.44818149029357,7.20229040936989,6.83638033970382,10.5527201882547,5.48979050766079,3.67908842061751,5.252383136138,2.62625439592098,24.7758711135373,2.22510362412612,33.1489508747834,8.46186158649212,21.852954229626,26.183215523652,31.8497550589989,30.8850533828806,15.1280802694531,14.2750481370131,17.274996725553,5.72802370809068,1.10717597753397,2.84647253977588,4.42821897369385,3.972677624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|phase1_expression=3.52327463630547,35.5954915792148,27.2999543633722,47.1844169638655,38.5689712058687,11.9194283057442,17.7545606852599,51.6493293766305,11.9670413828917,10.5329036844897,20.5461561870606,24.1709641755869,64.2002737242021,55.6867963409013,27.9812199925157,38.6727760714568,32.8794082720229,42.7451234060412,48.6756239300373,44.1365237869951,13.6069264241712,14.4964788753293,12.7987896678078,18.2391361984484,15.1410125504332,24.6919744569459,19.3842898271584,17.6686410802429,19.0023419456374,17.8941392129551,16.6297882991479,10.7955214488137,7.99584223859941,47.5445043046316,7.79899373328441,9.14290549471708,14.4960242946282,30.5528090437943,21.0960543021426,24.6056159667685,38.2350467220159,43.7149110373405,30.1016418879315,16.6183799727762,17.335455238537,8.07605709511399,9.38869613217647,3.92445281484804,3.95435128922049,8.1660557611199,5.73944328663986,2.87505128729943,31.8786951509699,45.6978149467147,56.463758255934,17.4936416504444,15.7593391966316,31.455997628924,0,1.5869729378161,0.633831403506179,3.38844532069132,5.33576877666684,13.9484456178617,28.6771245144423,16.3410426437603,8.08920298399693,8.83702102239575,1.03689612308478,1.89008313664367,0.420649922702764,2.85650984403804,4.19650227808066,0.857435594504678,0.958454710182364,0,6.60695285996332,4.21368215681119,4.76180253094355,0.527545150920775,0.274462930807229,0,3.07101298901519,1.12552522006336,3.51435969886663,2.35702868378934,2.27794689278565,1.1183966749518,10.298762293313,10.5044468548432,43.7695377939533,13.7667820317022,4.75979933595425,18.3499085156858,18.8435161059824,16.1289679355041,14.6062196937022,6.81721290312231,6.49465011507172,6.36011234118612,3.66192891419369,25.6652954828636,35.6727335589304,21.3320010945999,15.5873549528074,12.1612735428047,17.1878311305026,20.3247305899927,33.9208627577795,12.3206975423805,2.60227990149204,4.26251669636998,3.92046345335299,9.94769427647309,8.11362079236363,10.8073268543521,17.5508427091405,14.0261376212314,26.5383165584962,5.3383060482645,8.83366073841574,11.6370060752453,13.0474232852686,2.04946557908083,1.04723353406728,27.3339049073193,10.0644704584973,5.99902730993408,7.75128385145695,1.49790639404823,4.57500602818627,0.879580464790051,1.04294592115366,0.767146371990992,3.74018480207208,2.10913641988085,6.41587992256993,15.0532434438213,5.81262344397452,9.6803253707778,1.04096354370163,0.689706313300419,1.62055916824814,3.31550599238573,3.40182495756639,1.7935920839879,1.68663104207512,4.65666067330228,1.94011193639558,1.89106080167819,1.23165786914764,2.84954452155847,4.44875598760957,3.48252166522167,3.90986059175093,4.17971960318836,9.12877143507205,4.88961023517959,8.24074148247219,2.07125772535502,1.87620847984877,1.62055855314913,3.55117103377815,2.95146347621106,3.85667782218446,3.48800917125612,5.36546802799238,4.55384835231961,2.96207729844265,7.22336841948019,8.75543143095242,12.5731989185786,10.9775057645525,11.0049263383505,2.3131894342054,0.92614151141356,26.4335026387038,25.1228038330367,0.853153002140936,3.0190767341857,4.38149368495117,6.25218926332362,8.89512175379481,11.7939888189787,19.455691523325,11.1995289212327,14.8287773192159,19.6966907320739,17.5467678407208,23.3693046250098,22.9106332867176,18.9184209591649,1.89667900953082,3.77020091612105,0,4.2766778847516,7.17624202520215,4.97964321221262,7.46191138066236,14.0229640580622,10.2049173096894,8.26760998276064,14.2297261001831,6.34011401721157,6.4864468387357,8.99448449539415,10.9544465549792,8.92355491083942,15.786802810448,18.4125527968519,17.9970101720289,6.31491250332587,14.3768206527355,19.7234702264307,17.1620720213008,15.6598904327209,10.0462551572271,11.0962009913574,36.2116252726545,2.27389694124582,3.42226450528254,6.28056817368196,6.57132695207806,12.0604505358107,18.8054476299951,14.2447562936193,14.6600684018758,15.0595988961167,12.118562417969,26.3819936692338,24.6939524068231,27.3386720719057,52.7769493787453,47.8637001760464,11.3105782794378,10.7615331058846,2.24770825982909,1.75817529888305,6.06559297893699,5.80683132570058,7.57219726599016,5.85658116444958,6.89354872744957,6.69112634267146,8.46634961513098,7.35998980050964,6.8817819284732,7.89090816360542,6.7198922250909,2.89189184779626,9.509985708954,4.09550888434687,5.21238269931443,13.6925202067204,10.619611067197,3.64170954232472,3.32555912661226,5.28094223316515,4.72483028609236,5.53383266299069,11.62927319257,7.63420831902762,8.19943970284859,10.4292130118819,11.5960469432499,8.25084345985495,22.8094535855038,1.98067203434441,1.81102157295856,3.00071849044229,5.14286677562593,6.24290861607247,6.91105886528908,9.13394847343798,8.44818149029357,7.20229040936989,6.83638033970382,10.5527201882547,5.48979050766079,3.67908842061751,5.252383136138,2.62625439592098,24.7758711135373,2.22510362412612,33.1489508747834,8.46186158649212,21.852954229626,26.183215523652,31.8497550589989,30.8850533828806,15.1280802694531,14.2750481370131,17.274996725553,5.72802370809068,1.10717597753397,2.84647253977588,4.42821897369385,3.972677624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|short_description=p1@Trim56
}}
}}

Revision as of 17:26, 18 April 2012

Short description:p1@Trim56
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trim56_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000054384, ENSMUST00000152207, ENSMUST00000165237, NM_201373, uc009abp.1, uc009abq.1_5end
EntrezGene:Trim56
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Trim56

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I535.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I627.30
CD326+ enterocyte, pool1.CNhs13542.11848-124I347.18
CD326+ enterocyte, pool2.CNhs13197.11849-124I438.57
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.92
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.75
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E951.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E711.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F210.53
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E620.55
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F124.17
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E464.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E855.69
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A127.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A338.67
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A532.88
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A242.75
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A448.68
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A644.14
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H214.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I912.80
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D118.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D215.14
GP2+ M cell, pool1.CNhs13228.11845-124H924.69
GP2+ M cell, pool2.CNhs13231.11846-124I119.38
GP2+ M cell, pool3.CNhs13240.11847-124I217.67
Ileum epithelium, pool1.CNhs13199.10252-104B919.00
Ileum epithelium, pool2.CNhs13232.10253-104C117.89
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C816.63
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.80
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.80
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.14
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F714.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G830.55
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H121.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H324.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G938.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H243.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H430.10
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D816.62
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D917.34
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.08
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.74
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A231.88
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I945.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A156.46
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C117.49
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E115.76
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C531.46
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E728.68
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D216.34
Mouse Microglia, donor1.CNhs12629.11718-123C88.09
Mouse Microglia, donor2.CNhs12634.11736-123E88.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D910.30
Mouse Schwann, donor2.CNhs12573.11746-123F910.50
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G343.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F713.77
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C818.35
Mouse hepatocyte, donor6.CNhs13090.11822-124F418.84
Mouse hepatocyte, donor8.CNhs13091.11824-124F616.13
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A714.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.36
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H125.67
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I835.67
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G115.59
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G317.19
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B620.32
accessory axillary lymph node, adult.CNhs10475.1063-29H933.92
adrenal gland, adult.CNhs10508.49-24D712.32
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F59.95
adrenal gland, neonate N00.CNhs11191.1311-23C18.11
adrenal gland, neonate N25.CNhs11223.1377-27I310.81
amnion, adult pregnant day17.5.CNhs10488.583-22A817.55
aorta, adult.CNhs10498.46-23H114.03
bone (os femoris), adult.CNhs10483.56-12G226.54
bone (os femoris), neonate N02.CNhs11227.1985-43F55.34
bone (os femoris), neonate N16.CNhs11225.1525-43A68.83
bone (os femoris), neonate N20.CNhs11195.1350-25C311.64
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H727.33
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.06
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.75
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.42
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.05
epididymis, adult.CNhs10490.58-23B25.81
eyeball, adult.CNhs10484.31-12G49.68
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C63.40
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B53.91
gonad, embryo E13.CNhs11044.1564-45I64.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.13
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.89
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D58.24
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C63.86
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G35.37
heart, neonate N00.CNhs11213.639-21E34.55
heart, neonate N03.CNhs11221.1349-25I22.96
heart, neonate N10.CNhs11118.749-24G17.22
heart, neonate N16.CNhs11209.782-15G18.76
heart, neonate N20.CNhs11127.821-26I612.57
heart, neonate N25.CNhs11196.1351-25D310.98
heart, neonate N30.CNhs11202.1390-42D211.00
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I326.43
intestine, adult.CNhs10496.178-9A325.12
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D84.38
intestine, embryo E16.CNhs10585.463-22H46.25
intestine, embryo E17.CNhs10582.482-18D38.90
intestine, embryo E18.CNhs10526.1289-20F711.79
intestine, neonate N00.CNhs11126.644-26D119.46
intestine, neonate N01.CNhs11192.1322-23E911.20
intestine, neonate N06.CNhs11102.688-20B814.83
intestine, neonate N07.CNhs11095.720-20F219.70
intestine, neonate N10.CNhs11098.755-23A517.55
intestine, neonate N20.CNhs11187.827-18D123.37
intestine, neonate N25.CNhs11121.1352-25E322.91
intestine, neonate N30.CNhs11131.1384-42G118.92
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F83.77
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I24.28
kidney, embryo E18.CNhs11001.1288-20C77.18
kidney, neonate N00.CNhs11214.646-21G74.98
kidney, neonate N10.CNhs11206.758-6D57.46
kidney, neonate N20.CNhs11113.832-19I114.02
kidney, neonate N25.CNhs11122.1353-25F310.20
kidney, neonate N30.CNhs11203.1385-42H18.27
liver, adult pregnant day01.CNhs10466.508-5B214.23
liver, embryo E12.CNhs10601.355-15F86.34
liver, embryo E13.CNhs10524.378-3H66.49
liver, embryo E14.CNhs10594.409-16E18.99
liver, embryo E15.CNhs10520.433-16D710.95
liver, embryo E16.CNhs10523.462-17F58.92
liver, embryo E17.CNhs10510.481-18A315.79
liver, embryo E18.CNhs10579.499-43G418.41
liver, neonate N00.CNhs11117.641-24F418.00
liver, neonate N03.CNhs11123.1345-25G26.31
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H219.72
liver, neonate N10.CNhs11115.751-24B917.16
liver, neonate N20.CNhs11220.823-25A315.66
liver, neonate N25.CNhs11198.1368-26H110.05
liver, neonate N30.CNhs11106.1382-42D111.10
lung, adult.CNhs10474.28-22B136.21
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F83.42
lung, embryo E15.CNhs11020.432-17C56.28
lung, embryo E16.CNhs10998.458-17B66.57
lung, embryo E17.CNhs10605.480-44A612.06
lung, embryo E18.CNhs10583.1287-20I618.81
lung, neonate N00.CNhs11224.640-42C614.24
lung, neonate N06.CNhs11212.683-20E514.66
lung, neonate N07.CNhs11111.715-19A315.06
lung, neonate N10.CNhs11219.750-23E612.12
lung, neonate N20.CNhs11109.822-18A426.38
lung, neonate N25.CNhs11119.1359-25C724.69
lung, neonate N30.CNhs11133.1394-42H227.34
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A152.78
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A147.86
mammary gland, adult lactating day02.CNhs10480.595-22B611.31
mammary gland, adult pregnant day19.CNhs10476.588-5H210.76
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.57
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.89
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.69
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.47
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.36
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.89
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.72
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I79.51
ovary, embryo E18.CNhs11040.505-44H74.10
ovary, neonate N00.CNhs11217.1299-22I45.21
oviduct, adult pregnant day01.CNhs10500.988-6G613.69
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E55.28
pancreas, embryo E17.CNhs10599.1558-45G34.72
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G911.63
pancreas, neonate N01.CNhs11138.1531-43D77.63
pancreas, neonate N02.CNhs11139.1539-43D88.20
pancreas, neonate N16.CNhs11136.787-43B610.43
pancreas, neonate N25.CNhs11094.1555-45E211.60
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G822.81
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B95.14
pituitary gland, embryo E16.CNhs11036.449-43F66.24
pituitary gland, embryo E17.CNhs11039.1265-44F56.91
pituitary gland, neonate N00.CNhs11190.1308-22E99.13
placenta, adult pregnant day10.CNhs10472.539-13I78.45
placenta, adult pregnant day17.CNhs10464.577-18G37.20
prostate, adult.CNhs10470.859-1F86.84
skin, adult.CNhs10492.30-1C310.55
skin, neonate N00.CNhs11124.650-25G45.49
skin, neonate N03.CNhs11215.662-22H33.68
skin, neonate N06.CNhs11097.693-20I55.25
skin, neonate N10.CNhs11108.762-6C42.63
small intestine, neonate N16.CNhs11114.790-21I124.78
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G233.15
spleen, embryo E16.CNhs11035.461-43C18.46
spleen, embryo E18.CNhs11011.1271-21F221.85
spleen, neonate N10.CNhs11116.752-24D126.18
spleen, neonate N20.CNhs11112.824-19H131.85
spleen, neonate N25.CNhs11099.1354-25G330.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C615.13
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C914.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.27
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D44.43
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C67.42
stomach, neonate N03.CNhs11193.1340-24B85.93
stomach, neonate N07.CNhs11210.718-18A97.77
stomach, neonate N25.CNhs11104.1355-25E49.16
stomach, neonate N30.CNhs11134.1386-42I113.74
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B73.52
testis, neonate N07.CNhs11222.726-26I42.86
testis, neonate N10.CNhs11204.763-44D92.52
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B537.92
thymus, embryo E14.CNhs11041.402-44I48.31
thymus, embryo E15.CNhs11005.430-45I26.37
thymus, embryo E16.CNhs11002.456-26C513.64
thymus, embryo E17.CNhs10581.478-18C113.07
thymus, embryo E18.CNhs10595.1273-19G418.87
thymus, neonate N02.CNhs11181.1541-43F824.64
thymus, neonate N03.CNhs11137.2104-43C719.64
thymus, neonate N06.CNhs11197.681-26C420.70
thymus, neonate N07.CNhs11211.713-19D322.56
thymus, neonate N10.CNhs11194.748-24E422.89
thymus, neonate N20.CNhs11186.820-7A232.65
thymus, neonate N25.CNhs11125.1362-25G735.69
thymus, neonate N30.CNhs11132.1393-42G239.39
tongue, adult.CNhs10499.32-1B45.89
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.13
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.52
urinary bladder, adult.CNhs10481.879-12E419.13
uterus, adult pregnant day19.CNhs10497.590-15F513.70
uterus, adult.CNhs10509.92-27E515.20
vagina, adult.CNhs10502.89-27D59.65
vesicular gland, adult.CNhs10491.51-27F812.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.95
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.69
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.66
whole body, embryo E17.5.CNhs10513.490-9F96.17
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C29.67
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D16.62
whole body, neonate N10.CNhs10518.761-6B45.33





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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