Personal tools

FFCP PHASE1:Mm9::chr2:25211839..25211886,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Dpp7_5end
|description=CAGE_peak_1_at_Dpp7_5end
|id=chr2:25211839..25211886,-
|id=chr2:25211839..25211886,-
|ontology_enrichment_celltype=CL:0000055!3.55e-07!50
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=26.2644109251862,6.63053274514786,3.63999391511629,4.23449895829562,4.00716583957078,5.03637815735669,6.77476657727024,6.19791952519566,0.281577444303333,1.17032263160997,3.4243593645101,4.54701306273417,2.9104124088305,4.63328132820686,4.66353666541928,5.4668322195253,2.09868563438444,13.249410945046,12.8887567589394,13.1560792057389,16.6684848696097,6.85107563286109,2.61199789138935,8.79958325363737,10.0940083669555,6.31655160526522,5.1691439539089,8.40337807474967,12.1614988452079,9.07308467135751,11.0865255327652,6.98533740805594,9.22597181376855,15.8481681015439,9.53210345179206,8.47796691328311,9.80012910059372,7.11503772252743,3.906676722619,3.14114246384279,3.52938892818609,3.41522742479223,2.42755176515577,39.7833944802824,40.4493955565863,24.778811541827,40.684349906098,18.3141131359575,26.1426557454021,28.1923353657711,20.9979632438044,34.5006154475932,21.4761735753903,3.62681071005672,2.01656279485478,31.1283917603496,65.0430908660978,42.8007836590277,8.09265843438391,12.1667925232568,6.97214543856797,29.8183188220836,17.7858959222228,172.780745718029,189.862341612859,174.067628161795,64.414023761457,44.9535417226219,7.56934169851887,8.6403800532282,6.94072372459561,12.5686433137674,12.3686382932904,7.34944795289724,6.90087391331302,4.5960939330501,5.50579404996943,16.5993539510744,18.279177457493,8.30883612700221,7.31901148819277,10.939180781692,20.9387249251036,14.6318278608237,22.9197371665215,8.54422897873636,10.8202477407318,7.82877672466262,25.2925485732835,27.130190078336,16.5222758559956,22.371020801516,27.8788246820178,42.0968489477497,38.3368086294125,22.8493712419641,18.2577746171277,20.4516387093669,19.743736349818,21.5537140451308,27.7461536960061,6.41632387071589,5.09610479413291,0,4.32982082022428,1.26679932737549,3.53867111510348,18.6119723942068,11.3932668804756,21.0787837472051,9.54169297213747,15.5277393939192,19.3717017695089,18.6896074285252,15.7568867561844,18.3473223341326,191.823294961874,9.54355755671417,9.73071607144862,6.14714029800155,5.52103796150984,9.69750506270444,14.9113408974498,25.1791485429931,18.431310199584,9.70736809792647,3.23500836165985,4.79922184794726,4.82866862877646,23.666921025962,10.5225138648284,5.40313714085317,17.3824320192276,15.3429274398198,19.7398642331582,18.1710214635889,12.5262417535889,10.8234064430781,4.29628689337247,12.8369532090749,12.3614420814569,11.4951052216736,8.82304436046211,12.3577950625286,12.858898339601,12.811372028485,12.6497328155634,17.5918292102531,5.6047678162539,8.13156144721623,9.50136070485324,7.67185063496512,10.5657954705727,11.4923214952315,8.84863186554157,10.1507476077432,4.91549231119264,3.86021860672073,4.26245249093389,6.83515049367156,6.56672967947069,5.76198596675248,4.97163944728941,6.29645541591692,4.47374627373397,4.41814495025775,4.56064782379353,3.97002164048376,2.63295759861569,2.13417703302824,2.67527071501324,4.09359964790931,4.39100230582101,6.84452735677896,17.8746456279508,8.84979666461846,9.58214470653014,6.08236303326152,7.25180051819795,5.57368012465052,10.1805294444454,39.3282873015518,71.1609740303585,115.276729424211,8.0669940462567,102.113351928887,81.6839428600876,90.3262383066825,84.2244856354599,12.5834717211591,10.3746263939853,8.76221602319216,10.0523987505133,7.08340778180319,13.5249282807697,8.34970444165788,13.3827216145662,12.8348550399283,23.1445725874782,28.6363687080428,32.3417379353232,43.6825960283174,28.1629995732791,7.00749444007595,8.25547779475453,6.07127703439105,3.65148218499305,8.92355491083942,10.6942857748196,9.78166867332756,16.6999283578286,17.2973690308491,17.2521847832825,13.7692150637346,15.2898459826135,13.1341016532498,19.9131129009323,21.2275149399882,15.1497615936616,7.57965647081939,5.70377417547091,6.95954851678271,4.69380496577004,4.52266895092903,4.99891645860629,7.21994497073856,6.9359463406724,6.64394068946325,7.65382889555938,7.70157579163969,12.7786886580763,11.5719246865209,123.648852830203,89.2005321462684,9.83528546038072,4.96686143348518,23.922037908181,19.9259867206745,11.4754461763673,10.3513080153793,17.3529520678941,17.1793047490521,11.4174400798383,23.1799734013975,20.943075363745,11.6061377623421,23.074209995469,18.9966307642353,20.9502522311657,18.9579576688866,11.9229671574946,14.6013795007149,9.44744364250741,23.5907275850726,30.5313818181915,7.52619972080442,8.46505959501303,6.22396763194464,6.20133975049623,6.45613810682248,18.8652654012801,5.81653967164009,8.19943970284859,8.84902922220285,14.7586052004998,19.5957532171555,40.8527526904546,7.74262704334634,13.8413791647547,11.574199891706,13.3005175231705,15.161349496176,15.6321569572015,19.4857567433344,33.3233825450469,51.4751932199083,5.29268155331909,6.92522262354216,7.42736362801165,6.75504759195346,9.07229814423837,9.68431308495861,24.7758711135373,19.8405073151245,11.2774781326583,9.28740905834501,8.14855920426731,6.40452753815949,7.38148829693536,8.69357058184786,3.73952545986482,3.07893195112048,3.45499934511059,10.5013767981662,6.32671987162271,7.31950081656655,6.80433647177348,10.0362382086945,13.3201163885168,6.87808166562586,9.50514740841363,8.63794608547298,10.7580427832188,9.32008969630389,0.56369293868419,8.82147621659475,10.4238848987971,11.4726201122988,11.2369046425626,9.46154302748358,11.2662949099924,6.77062801188541,9.85677837601682,2.65742532908607,4.60848010012585,3.79213344753814,6.48720688928525,6.26536838705446,3.63778304337826,2.32734704367726,4.17230845040656,4.32703618271888,4.43068581523732,3.73575864808146,3.04827226619999,3.83139503519994,3.21611006441183,3.65604998233252,4.9088298916259,11.789979947991,9.76738194845885,11.3936597894034,10.5767308309369,14.2960299583821,57.0554725371593,16.6667978083211,14.1483130192183,9.02829787263654,11.2950368523413,7.36520378411483,16.0410743763031,12.2015759464018,13.7016503954128,17.3740596399631,16.2005400055633,22.0657389579868,14.9536994964788,14.497288729051,1.55681021376265,9.17757208822371,8.36594668195257,8.0225216632537,4.19226325255965,3.67687016900028,13.7792971237001,10.0957178047058,11.5530915453053,10.1078884705519,8.36481689637791,11.1289541417785,10.3942073291569,9.47572255592065,9.47685237767619,10.0021675169445,8.57544011991931,9.83837024364896,12.3625770240992,10.3039244094078,11.6575545811041,9.05126611412621,8.58370283810355,10.174249164263,10.4461412261017,10.4075967706762,7.50004688778368,9.2074399003245,9.77789619690205,7.2948495315506,9.13489639556141,9.65343927280522,12.6861623382604,8.83139994760006,10.0311437710194,8.74337022782811,12.8662384644975,13.7517474590911,9.94699326757986,9.48543102213917,6.02856372613096
|phase1_expression=26.2644109251862,6.63053274514786,3.63999391511629,4.23449895829562,4.00716583957078,5.03637815735669,6.77476657727024,6.19791952519566,0.281577444303333,1.17032263160997,3.4243593645101,4.54701306273417,2.9104124088305,4.63328132820686,4.66353666541928,5.4668322195253,2.09868563438444,13.249410945046,12.8887567589394,13.1560792057389,16.6684848696097,6.85107563286109,2.61199789138935,8.79958325363737,10.0940083669555,6.31655160526522,5.1691439539089,8.40337807474967,12.1614988452079,9.07308467135751,11.0865255327652,6.98533740805594,9.22597181376855,15.8481681015439,9.53210345179206,8.47796691328311,9.80012910059372,7.11503772252743,3.906676722619,3.14114246384279,3.52938892818609,3.41522742479223,2.42755176515577,39.7833944802824,40.4493955565863,24.778811541827,40.684349906098,18.3141131359575,26.1426557454021,28.1923353657711,20.9979632438044,34.5006154475932,21.4761735753903,3.62681071005672,2.01656279485478,31.1283917603496,65.0430908660978,42.8007836590277,8.09265843438391,12.1667925232568,6.97214543856797,29.8183188220836,17.7858959222228,172.780745718029,189.862341612859,174.067628161795,64.414023761457,44.9535417226219,7.56934169851887,8.6403800532282,6.94072372459561,12.5686433137674,12.3686382932904,7.34944795289724,6.90087391331302,4.5960939330501,5.50579404996943,16.5993539510744,18.279177457493,8.30883612700221,7.31901148819277,10.939180781692,20.9387249251036,14.6318278608237,22.9197371665215,8.54422897873636,10.8202477407318,7.82877672466262,25.2925485732835,27.130190078336,16.5222758559956,22.371020801516,27.8788246820178,42.0968489477497,38.3368086294125,22.8493712419641,18.2577746171277,20.4516387093669,19.743736349818,21.5537140451308,27.7461536960061,6.41632387071589,5.09610479413291,0,4.32982082022428,1.26679932737549,3.53867111510348,18.6119723942068,11.3932668804756,21.0787837472051,9.54169297213747,15.5277393939192,19.3717017695089,18.6896074285252,15.7568867561844,18.3473223341326,191.823294961874,9.54355755671417,9.73071607144862,6.14714029800155,5.52103796150984,9.69750506270444,14.9113408974498,25.1791485429931,18.431310199584,9.70736809792647,3.23500836165985,4.79922184794726,4.82866862877646,23.666921025962,10.5225138648284,5.40313714085317,17.3824320192276,15.3429274398198,19.7398642331582,18.1710214635889,12.5262417535889,10.8234064430781,4.29628689337247,12.8369532090749,12.3614420814569,11.4951052216736,8.82304436046211,12.3577950625286,12.858898339601,12.811372028485,12.6497328155634,17.5918292102531,5.6047678162539,8.13156144721623,9.50136070485324,7.67185063496512,10.5657954705727,11.4923214952315,8.84863186554157,10.1507476077432,4.91549231119264,3.86021860672073,4.26245249093389,6.83515049367156,6.56672967947069,5.76198596675248,4.97163944728941,6.29645541591692,4.47374627373397,4.41814495025775,4.56064782379353,3.97002164048376,2.63295759861569,2.13417703302824,2.67527071501324,4.09359964790931,4.39100230582101,6.84452735677896,17.8746456279508,8.84979666461846,9.58214470653014,6.08236303326152,7.25180051819795,5.57368012465052,10.1805294444454,39.3282873015518,71.1609740303585,115.276729424211,8.0669940462567,102.113351928887,81.6839428600876,90.3262383066825,84.2244856354599,12.5834717211591,10.3746263939853,8.76221602319216,10.0523987505133,7.08340778180319,13.5249282807697,8.34970444165788,13.3827216145662,12.8348550399283,23.1445725874782,28.6363687080428,32.3417379353232,43.6825960283174,28.1629995732791,7.00749444007595,8.25547779475453,6.07127703439105,3.65148218499305,8.92355491083942,10.6942857748196,9.78166867332756,16.6999283578286,17.2973690308491,17.2521847832825,13.7692150637346,15.2898459826135,13.1341016532498,19.9131129009323,21.2275149399882,15.1497615936616,7.57965647081939,5.70377417547091,6.95954851678271,4.69380496577004,4.52266895092903,4.99891645860629,7.21994497073856,6.9359463406724,6.64394068946325,7.65382889555938,7.70157579163969,12.7786886580763,11.5719246865209,123.648852830203,89.2005321462684,9.83528546038072,4.96686143348518,23.922037908181,19.9259867206745,11.4754461763673,10.3513080153793,17.3529520678941,17.1793047490521,11.4174400798383,23.1799734013975,20.943075363745,11.6061377623421,23.074209995469,18.9966307642353,20.9502522311657,18.9579576688866,11.9229671574946,14.6013795007149,9.44744364250741,23.5907275850726,30.5313818181915,7.52619972080442,8.46505959501303,6.22396763194464,6.20133975049623,6.45613810682248,18.8652654012801,5.81653967164009,8.19943970284859,8.84902922220285,14.7586052004998,19.5957532171555,40.8527526904546,7.74262704334634,13.8413791647547,11.574199891706,13.3005175231705,15.161349496176,15.6321569572015,19.4857567433344,33.3233825450469,51.4751932199083,5.29268155331909,6.92522262354216,7.42736362801165,6.75504759195346,9.07229814423837,9.68431308495861,24.7758711135373,19.8405073151245,11.2774781326583,9.28740905834501,8.14855920426731,6.40452753815949,7.38148829693536,8.69357058184786,3.73952545986482,3.07893195112048,3.45499934511059,10.5013767981662,6.32671987162271,7.31950081656655,6.80433647177348,10.0362382086945,13.3201163885168,6.87808166562586,9.50514740841363,8.63794608547298,10.7580427832188,9.32008969630389,0.56369293868419,8.82147621659475,10.4238848987971,11.4726201122988,11.2369046425626,9.46154302748358,11.2662949099924,6.77062801188541,9.85677837601682,2.65742532908607,4.60848010012585,3.79213344753814,6.48720688928525,6.26536838705446,3.63778304337826,2.32734704367726,4.17230845040656,4.32703618271888,4.43068581523732,3.73575864808146,3.04827226619999,3.83139503519994,3.21611006441183,3.65604998233252,4.9088298916259,11.789979947991,9.76738194845885,11.3936597894034,10.5767308309369,14.2960299583821,57.0554725371593,16.6667978083211,14.1483130192183,9.02829787263654,11.2950368523413,7.36520378411483,16.0410743763031,12.2015759464018,13.7016503954128,17.3740596399631,16.2005400055633,22.0657389579868,14.9536994964788,14.497288729051,1.55681021376265,9.17757208822371,8.36594668195257,8.0225216632537,4.19226325255965,3.67687016900028,13.7792971237001,10.0957178047058,11.5530915453053,10.1078884705519,8.36481689637791,11.1289541417785,10.3942073291569,9.47572255592065,9.47685237767619,10.0021675169445,8.57544011991931,9.83837024364896,12.3625770240992,10.3039244094078,11.6575545811041,9.05126611412621,8.58370283810355,10.174249164263,10.4461412261017,10.4075967706762,7.50004688778368,9.2074399003245,9.77789619690205,7.2948495315506,9.13489639556141,9.65343927280522,12.6861623382604,8.83139994760006,10.0311437710194,8.74337022782811,12.8662384644975,13.7517474590911,9.94699326757986,9.48543102213917,6.02856372613096
|short_description=p1@Dpp7
|short_description=p1@Dpp7
}}
}}

Revision as of 16:58, 18 April 2012

Short description:p1@Dpp7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dpp7_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000028332, ENSMUST00000125248, ENSMUST00000135473, ENSMUST00000139108, ENSMUST00000139971, ENSMUST00000150305, NM_031843, uc008irq.1_5end
EntrezGene:Dpp7
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dpp7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G726.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.23
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.77
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.42
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.55
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.63
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.47
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A213.25
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.89
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A613.16
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D210.09
GP2+ M cell, pool1.CNhs13228.11845-124H96.32
GP2+ M cell, pool2.CNhs13231.11846-124I15.17
GP2+ M cell, pool3.CNhs13240.11847-124I28.40
Ileum epithelium, pool1.CNhs13199.10252-104B912.16
Ileum epithelium, pool2.CNhs13232.10253-104C19.07
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.09
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.53
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F79.80
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.12
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D839.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D940.45
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B324.78
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B740.68
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C218.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B826.14
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C328.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C421.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C434.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A221.48
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C131.13
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E165.04
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C542.80
Mouse Granule cells, donor1.CNhs12131.11713-123C38.09
Mouse Granule cells, donor2.CNhs12357.11731-123E312.17
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C629.82
Mouse Meningeal cells, donor3.CNhs12109.11639-122D117.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7172.78
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7189.86
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2174.07
Mouse Microglia, donor1.CNhs12629.11718-123C864.41
Mouse Microglia, donor2.CNhs12634.11736-123E844.95
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.57
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.64
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.37
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.90
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.28
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.31
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.32
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E420.94
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I622.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.82
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.83
Mouse Schwann, donor1.CNhs12507.11728-123D925.29
Mouse Schwann, donor2.CNhs12573.11746-123F927.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.52
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F722.37
Mouse hepatocyte, donor1.CNhs13078.11714-123C427.88
Mouse hepatocyte, donor3.CNhs12615.11637-122C842.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F438.34
Mouse hepatocyte, donor8.CNhs13091.11824-124F622.85
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A718.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I720.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E319.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I821.55
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G627.75
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B618.61
accessory axillary lymph node, adult.CNhs10475.1063-29H911.39
adrenal gland, adult.CNhs10508.49-24D721.08
adrenal gland, embryo E14.CNhs11038.406-44C59.54
adrenal gland, embryo E16.CNhs11004.1254-43D615.53
adrenal gland, embryo E17.CNhs11043.1263-45I119.37
adrenal gland, embryo E18.CNhs11026.1262-18F518.69
adrenal gland, neonate N00.CNhs11191.1311-23C115.76
adrenal gland, neonate N25.CNhs11223.1377-27I318.35
amnion, adult pregnant day17.5.CNhs10488.583-22A8191.82
aorta, adult.CNhs10498.46-23H19.54
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F56.15
bone (os femoris), neonate N16.CNhs11225.1525-43A65.52
bone (os femoris), neonate N20.CNhs11195.1350-25C39.70
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B225.18
cerebellum, neonate N30.CNhs11135.1395-42I218.43
colon, adult.CNhs10468.36-18H79.71
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.83
corpora quadrigemina, adult.CNhs10501.16-22A423.67
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F15.40
cortex, adult.CNhs10473.12-14D517.38
cortex, neonate N30.CNhs11107.1392-42F215.34
diencephalon, adult.CNhs10482.20-12F219.74
diencephalon, neonate N30.CNhs11201.1388-42B218.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.82
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G412.84
eyeball, embryo E12.CNhs11016.345-16C612.36
eyeball, embryo E14.CNhs10521.399-16E211.50
eyeball, embryo E15.CNhs10593.426-16C98.82
eyeball, embryo E17.CNhs11023.1261-18D412.36
eyeball, neonate N00.CNhs11207.633-15C612.86
eyeball, neonate N01.CNhs11140.1532-43E712.81
eyeball, neonate N02.CNhs11205.1551-44G812.65
eyeball, neonate N16.CNhs11188.777-19A217.59
forelimb, embryo E11.CNhs10596.335-25E25.60
forelimb, embryo E12.CNhs10600.359-14H28.13
forelimb, embryo E13.CNhs10589.384-1E29.50
forelimb, embryo E14.CNhs10577.413-26A87.67
forelimb, embryo E15.CNhs11007.437-20E710.57
forelimb, embryo E17.CNhs10598.1517-43C411.49
forelimb, embryo E18.CNhs11008.1520-43B58.85
gonad, embryo E13.CNhs11044.1564-45I610.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.26
heart, embryo E11.CNhs10586.331-24E96.84
heart, embryo E12.CNhs11015.353-12F56.57
heart, embryo E13.CNhs11013.376-3I95.76
heart, embryo E14.CNhs10597.403-26D44.97
heart, embryo E15.CNhs11017.431-16C86.30
heart, embryo E16.CNhs11021.457-17C64.47
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G34.56
heart, neonate N00.CNhs11213.639-21E33.97
heart, neonate N03.CNhs11221.1349-25I22.63
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G12.68
heart, neonate N20.CNhs11127.821-26I64.09
heart, neonate N25.CNhs11196.1351-25D34.39
heart, neonate N30.CNhs11202.1390-42D26.84
hippocampus, adult.CNhs10478.13-16E817.87
hippocampus, neonate N00.CNhs11228.627-43G18.85
intestinal mucosa, adult.CNhs10506.860-29I39.58
intestine, adult.CNhs10496.178-9A36.08
intestine, embryo E12.CNhs11019.1251-16I57.25
intestine, embryo E13.CNhs11010.381-16D55.57
intestine, embryo E15.CNhs10602.976-16D810.18
intestine, embryo E16.CNhs10585.463-22H439.33
intestine, embryo E17.CNhs10582.482-18D371.16
intestine, embryo E18.CNhs10526.1289-20F7115.28
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E9102.11
intestine, neonate N06.CNhs11102.688-20B881.68
intestine, neonate N07.CNhs11095.720-20F290.33
intestine, neonate N10.CNhs11098.755-23A584.22
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E310.37
intestine, neonate N30.CNhs11131.1384-42G18.76
kidney, embryo E14.CNhs10606.411-4I910.05
kidney, embryo E15.CNhs10997.434-16F87.08
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I28.35
kidney, embryo E18.CNhs11001.1288-20C713.38
kidney, neonate N00.CNhs11214.646-21G712.83
kidney, neonate N10.CNhs11206.758-6D523.14
kidney, neonate N20.CNhs11113.832-19I128.64
kidney, neonate N25.CNhs11122.1353-25F332.34
kidney, neonate N30.CNhs11203.1385-42H143.68
liver, adult pregnant day01.CNhs10466.508-5B228.16
liver, embryo E12.CNhs10601.355-15F87.01
liver, embryo E13.CNhs10524.378-3H68.26
liver, embryo E14.CNhs10594.409-16E16.07
liver, embryo E15.CNhs10520.433-16D73.65
liver, embryo E16.CNhs10523.462-17F58.92
liver, embryo E17.CNhs10510.481-18A310.69
liver, embryo E18.CNhs10579.499-43G49.78
liver, neonate N00.CNhs11117.641-24F416.70
liver, neonate N03.CNhs11123.1345-25G217.30
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H213.77
liver, neonate N10.CNhs11115.751-24B915.29
liver, neonate N20.CNhs11220.823-25A313.13
liver, neonate N25.CNhs11198.1368-26H119.91
liver, neonate N30.CNhs11106.1382-42D121.23
lung, adult.CNhs10474.28-22B115.15
lung, embryo E12.CNhs10522.354-16G27.58
lung, embryo E14.CNhs10604.404-26F85.70
lung, embryo E15.CNhs11020.432-17C56.96
lung, embryo E16.CNhs10998.458-17B64.69
lung, embryo E17.CNhs10605.480-44A64.52
lung, embryo E18.CNhs10583.1287-20I65.00
lung, neonate N00.CNhs11224.640-42C67.22
lung, neonate N06.CNhs11212.683-20E56.94
lung, neonate N07.CNhs11111.715-19A36.64
lung, neonate N10.CNhs11219.750-23E67.65
lung, neonate N20.CNhs11109.822-18A47.70
lung, neonate N25.CNhs11119.1359-25C712.78
lung, neonate N30.CNhs11133.1394-42H211.57
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1123.65
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A189.20
mammary gland, adult lactating day02.CNhs10480.595-22B69.84
mammary gland, adult pregnant day19.CNhs10476.588-5H24.97
medulla oblongata, adult.CNhs10477.17-12C223.92
medulla oblongata, neonate N30.CNhs11200.1396-42A319.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C711.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.35
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.35
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E217.18
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.42
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D723.18
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D820.94
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.61
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D423.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.95
olfactory brain, adult.CNhs10489.18-22I918.96
ovary, adult.CNhs10507.91-2I711.92
ovary, embryo E18.CNhs11040.505-44H714.60
ovary, neonate N00.CNhs11217.1299-22I49.45
oviduct, adult pregnant day01.CNhs10500.988-6G623.59
pancreas, adult.CNhs10486.34-16E430.53
pancreas, embryo E14.CNhs11012.405-44F47.53
pancreas, embryo E15.CNhs11042.1556-45F28.47
pancreas, embryo E16.CNhs11003.460-26E56.22
pancreas, embryo E17.CNhs10599.1558-45G36.20
pancreas, embryo E18.CNhs10580.1535-43I76.46
pancreas, neonate N00.CNhs11105.645-26G918.87
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D88.20
pancreas, neonate N16.CNhs11136.787-43B68.85
pancreas, neonate N25.CNhs11094.1555-45E214.76
pancreas, neonate N30.CNhs11182.1548-44H519.60
pituitary gland, adult.CNhs10493.21-1G840.85
pituitary gland, embryo E12.CNhs11018.346-16E67.74
pituitary gland, embryo E13.CNhs11009.370-44C713.84
pituitary gland, embryo E14.CNhs11037.398-44A511.57
pituitary gland, embryo E15.CNhs10592.427-16B913.30
pituitary gland, embryo E16.CNhs11036.449-43F615.16
pituitary gland, embryo E17.CNhs11039.1265-44F515.63
pituitary gland, neonate N00.CNhs11190.1308-22E919.49
placenta, adult pregnant day10.CNhs10472.539-13I733.32
placenta, adult pregnant day17.CNhs10464.577-18G351.48
prostate, adult.CNhs10470.859-1F85.29
skin, adult.CNhs10492.30-1C36.93
skin, neonate N00.CNhs11124.650-25G47.43
skin, neonate N03.CNhs11215.662-22H36.76
skin, neonate N06.CNhs11097.693-20I59.07
skin, neonate N10.CNhs11108.762-6C49.68
small intestine, neonate N16.CNhs11114.790-21I124.78
spinal cord, adult.CNhs10505.24-13C919.84
spleen, adult.CNhs10465.25-2G211.28
spleen, embryo E16.CNhs11035.461-43C19.29
spleen, embryo E18.CNhs11011.1271-21F28.15
spleen, neonate N10.CNhs11116.752-24D16.40
spleen, neonate N20.CNhs11112.824-19H17.38
spleen, neonate N25.CNhs11099.1354-25G38.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.45
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E36.33
stomach, embryo E15.CNhs10603.1252-16G87.32
stomach, embryo E16.CNhs11022.459-17D46.80
stomach, embryo E17.CNhs11006.1035-18D510.04
stomach, embryo E18.CNhs10999.1286-20C613.32
stomach, neonate N03.CNhs11193.1340-24B86.88
stomach, neonate N07.CNhs11210.718-18A99.51
stomach, neonate N25.CNhs11104.1355-25E48.64
stomach, neonate N30.CNhs11134.1386-42I110.76
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F58.82
testis, embryo E15.CNhs11034.443-27C510.42
testis, embryo E16.CNhs11033.470-26G511.47
testis, embryo E17.CNhs11029.486-18I511.24
testis, embryo E18.CNhs11027.503-18G59.46
testis, neonate N00.CNhs11189.1300-22B711.27
testis, neonate N07.CNhs11222.726-26I46.77
testis, neonate N10.CNhs11204.763-44D99.86
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I46.49
thymus, embryo E15.CNhs11005.430-45I26.27
thymus, embryo E16.CNhs11002.456-26C53.64
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G44.17
thymus, neonate N02.CNhs11181.1541-43F84.33
thymus, neonate N03.CNhs11137.2104-43C74.43
thymus, neonate N06.CNhs11197.681-26C43.74
thymus, neonate N07.CNhs11211.713-19D33.05
thymus, neonate N10.CNhs11194.748-24E43.83
thymus, neonate N20.CNhs11186.820-7A23.22
thymus, neonate N25.CNhs11125.1362-25G73.66
thymus, neonate N30.CNhs11132.1393-42G24.91
tongue, adult.CNhs10499.32-1B411.79
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H39.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F711.39
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.58
urinary bladder, adult.CNhs10481.879-12E414.30
uterus, adult pregnant day19.CNhs10497.590-15F557.06
uterus, adult.CNhs10509.92-27E516.67
vagina, adult.CNhs10502.89-27D514.15
vesicular gland, adult.CNhs10491.51-27F89.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.04
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.07
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.95
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A914.50
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C99.18
whole body, embryo E13.CNhs10512.372-23H28.37
whole body, embryo E14.5.CNhs10578.420-27D28.02
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F23.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.55
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.11
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.39
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.84
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.17
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.41
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.50
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.83
whole body, embryo E17.5.CNhs10513.490-9F910.03
whole body, embryo E17.CNhs10517.475-3I58.74
whole body, embryo E18.CNhs10516.493-3B312.87
whole body, neonate N00.CNhs10525.657-19C213.75
whole body, neonate N01.CNhs10576.659-23C69.95
whole body, neonate N06.CNhs10515.692-21D19.49
whole body, neonate N10.CNhs10518.761-6B46.03





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:25211839..25211886,-&oldid=917263"