Personal tools

FFCP PHASE1:Mm9::chr5:116081911..116081942,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:116081911..116081942,+
|short_description=p2@Rab35
|description=CAGE_peak_2_at_Rab35_5end
|association_with_transcript=0bp_to_ENSMUST00000031492_5end
|EntrezGene=77407
|EntrezGene=77407
|HGNC=
|HGNC=
|UniProt=Q6PHN9
|UniProt=Q6PHN9
|association_with_transcript=0bp_to_ENSMUST00000031492_5end
|description=CAGE_peak_2_at_Rab35_5end
|id=chr5:116081911..116081942,+
|ontology_enrichment_disease=
|phase1_expression=3.84357233051505,2.44282785347553,0.909998478779072,0.90739263392049,0.500895729946347,1.34303417529512,0.700837921786577,1.03298658753261,0,0,2.73948749160808,1.43589886191606,0.342401459862411,1.04904482902797,5.66286595086627,3.84703008040669,5.59649502502517,1.57731082679119,2.19383093769182,2.54633791078818,2.04103896362567,1.29078236561151,1.82839852397255,1.27993938234725,0.68822784320151,1.14846392823004,0.430761996159075,0.215471232685889,0.570070258369122,0.504060259519861,0.886922042621219,1.27006134691926,4.30545351309199,0,1.1554064790051,0.498703936075477,0.408338712524738,3.34825304589526,0,2.09409497589519,1.17646297606203,2.73218193983378,1.45653105909346,0.503587271902309,0.608261587317087,1.46837401729345,4.69434806608824,5.66865406589161,5.05278220289285,3.69416808241138,2.51975558925653,1.43752564364972,4.02678254538567,1.45072428402269,1.34437519656986,1.02903774414379,0.286533439938757,1.54701627683233,10.5204559646991,7.93486468908049,8.23980824558033,3.72728985276045,1.77858959222228,3.1496490104849,3.9554654502679,5.6838409195688,2.99600110518405,5.76327457982332,8.08778976006126,7.2903206699113,6.73039876324422,7.42692559449889,9.49734726091938,7.7169203505421,9.68039257284187,5.51531271966013,5.50579404996943,7.53355294702608,9.5236050618871,9.75958529203434,12.8997577479398,10.4182674111352,7.53794097303729,2.8138130501584,5.34793867218835,4.12480019663135,6.12198227436143,7.26957838718672,4.54357159999104,4.6854367266207,0.289864488701678,0,2.719885334831,0.539703191637817,1.29955283489534,0,1.96622188184453,2.21559419351475,1.81850203222008,1.7666978725517,3.38024207464033,0,0,0,1.08245520505607,0.760079596425296,1.01104889002957,0.79928715803342,1.03575153458869,1.7813056687779,3.64319186208885,1.82679286987285,2.53677046981664,2.71300752994721,1.52865319276416,1.75933227861546,2.22475470960936,0.289198713839823,2.65383165584962,1.94120219936891,1.76673214768315,1.93950101254089,0,2.04946557908083,4.81727425670947,0.255457055208591,1.07833612055328,2.99951365496704,1.39777249780371,4.04434726393021,3.66000482254901,7.16229807043327,3.12883776346098,5.11430914660661,3.94797284663164,3.40706652442291,2.64782346010822,1.99051152976149,0.505445516867349,1.05220927943237,3.513251959993,4.59804208866946,3.78130472591233,2.10986744970001,3.33378845841506,2.94661556655154,3.46696380870997,0.517406741478031,4.095791865724,3.21480336285293,4.22282697993477,3.5071317188412,3.33656699070717,1.74126083261083,1.23469281844766,4.17971960318836,0,1.80143534980301,1.98914449576915,2.69263504296152,2.11073453982987,2.70093092191522,2.60419209143731,1.77087808572663,1.3884040159864,2.09280550275367,1.60964040839772,0.700592054203017,2.13927804887525,2.13417703302824,1.54030738137126,1.46199987425332,1.3173006917463,1.34206418760372,1.68231958851302,6.38008596751563,0.991256348951394,0.528901133327089,4.69234151177515,3.71578674976702,2.06187938115349,2.01683524623343,1.77902435075896,2.09248188723815,2.84717436926707,1.4822905925161,1.25667604400135,1.1937388322469,1.55971269695296,1.79763881730844,1.08069024937347,1.1948476395262,4.36236172192088,1.82797620175566,1.1270773567308,0.814605311381257,1.74557238450863,2.24434623649019,1.51767689098217,1.18088118383682,0.470996183524124,1.23397163921801,0.296452627087149,3.83743743147016,4.71741588271687,3.14806957338795,3.65148218499305,1.92941727801933,2.5462585178142,0.863088412352432,1.94562272130042,0.274561413188081,1.43768206527355,0.744281895337007,0.936113019343682,0.252578877947112,0.717589654087649,0.964887042726734,1.47802552133284,3.41084541186873,1.95557971730431,2.37643120085263,1.87752198630802,1.84256883185997,2.61848004974615,2.34160377429359,1.7339865851681,2.21464689648775,2.71073106717728,1.3109065177259,1.89953480052485,0.578596234326046,4.52373851817817,0,0.491764273019036,1.10374698521893,4.65596710964597,3.04750385139728,2.45902418065013,1.00988370881749,4.73262329124385,1.95219372148319,3.01592756825919,1.43381278771531,2.45078541490634,6.22768367735431,1.61924280669958,2.33804686329049,2.37172666767914,2.24924921495265,1.98716119291576,3.91744328067962,4.88660878060728,1.31976098378028,0,1.94224508923985,2.72091201268276,1.13163047853539,1.47650946440386,1.22974059177571,0.258428293168221,0.363533729477506,0.712994756769443,1.26414703174326,0,0,1.70219802876894,1.8006109403131,4.39819524861365,4.50107773566344,1.95074257006501,3.21063871683727,4.27827453565514,3.04464949114599,1.64270195644597,1.27099242518292,1.32317038832977,1.31909002353184,2.09903754704677,2.29189114726992,2.86493625607528,3.28281799490123,0.874442509889552,5.7481843623258,3.58828849675491,2.88941615148511,3.33350149265481,3.57900068308913,3.00727300986255,4.80434163733698,1.18984900995699,1.39951452323658,1.65839968565309,0,3.32152793260192,1.82987520414164,0.86404272657441,2.29997125615916,1.31017538247707,1.34864346384821,0.991841468704031,0.523511883968059,0.259229946583586,0.621339313086926,1.12738587736838,2.24274819065968,2.64733584731356,3.69457257853691,3.7456348808542,2.70329800785245,2.46450201156083,2.73429208172295,2.20204623293993,1.93267296660805,2.01621004380506,1.89606672376907,2.22997736819181,2.15693010046137,3.37794139742267,4.29664069601955,2.78153896693771,2.40390899039938,3.10148007066612,1.9183625490148,2.43861781295999,1.71404514732629,1.75424185331554,3.07877893249054,1.63627663054197,3.40095575422817,3.7737612073591,2.9605572681127,3.8613461763738,0.965947970160952,0.563047426353546,1.46521299413812,1.2862102744744,0,2.25900737046827,3.22227665555024,3.43737308063638,2.23409137046794,3.42541259885321,3.7769694869485,3.37511250115903,1.80128481289688,3.17199686288943,4.65984280576638,4.4628559461196,3.19219898720825,4.78054096111576,1.94485373654635,3.77303692730368,2.38996560985018,2.22246727801615,1.85431551515005,1.60459604795908,1.76888048234658,2.02783439912192,1.50901073108861,2.43467919421694,2.4969809437899,2.75690250986944,3.33405583898152,1.73826488917283,2.70072908649187,3.29668720642645,1.76638704161277,2.05721551431249,1.95223386775271,2.38436189947321,2.90692833264657,3.19971893412124,2.03075058940024,2.56099162021882,2.63069711437843,2.58027816307137,0.561142271657738,3.08451047122853,3.44765688314472,2.45538625901814,2.01417893541756,1.73615949883027,2.99772693525535,2.10538447600868,1.93383948643468,2.48674831689496,1.10295709559758,1.39120701372253
|phase1_expression=3.84357233051505,2.44282785347553,0.909998478779072,0.90739263392049,0.500895729946347,1.34303417529512,0.700837921786577,1.03298658753261,0,0,2.73948749160808,1.43589886191606,0.342401459862411,1.04904482902797,5.66286595086627,3.84703008040669,5.59649502502517,1.57731082679119,2.19383093769182,2.54633791078818,2.04103896362567,1.29078236561151,1.82839852397255,1.27993938234725,0.68822784320151,1.14846392823004,0.430761996159075,0.215471232685889,0.570070258369122,0.504060259519861,0.886922042621219,1.27006134691926,4.30545351309199,0,1.1554064790051,0.498703936075477,0.408338712524738,3.34825304589526,0,2.09409497589519,1.17646297606203,2.73218193983378,1.45653105909346,0.503587271902309,0.608261587317087,1.46837401729345,4.69434806608824,5.66865406589161,5.05278220289285,3.69416808241138,2.51975558925653,1.43752564364972,4.02678254538567,1.45072428402269,1.34437519656986,1.02903774414379,0.286533439938757,1.54701627683233,10.5204559646991,7.93486468908049,8.23980824558033,3.72728985276045,1.77858959222228,3.1496490104849,3.9554654502679,5.6838409195688,2.99600110518405,5.76327457982332,8.08778976006126,7.2903206699113,6.73039876324422,7.42692559449889,9.49734726091938,7.7169203505421,9.68039257284187,5.51531271966013,5.50579404996943,7.53355294702608,9.5236050618871,9.75958529203434,12.8997577479398,10.4182674111352,7.53794097303729,2.8138130501584,5.34793867218835,4.12480019663135,6.12198227436143,7.26957838718672,4.54357159999104,4.6854367266207,0.289864488701678,0,2.719885334831,0.539703191637817,1.29955283489534,0,1.96622188184453,2.21559419351475,1.81850203222008,1.7666978725517,3.38024207464033,0,0,0,1.08245520505607,0.760079596425296,1.01104889002957,0.79928715803342,1.03575153458869,1.7813056687779,3.64319186208885,1.82679286987285,2.53677046981664,2.71300752994721,1.52865319276416,1.75933227861546,2.22475470960936,0.289198713839823,2.65383165584962,1.94120219936891,1.76673214768315,1.93950101254089,0,2.04946557908083,4.81727425670947,0.255457055208591,1.07833612055328,2.99951365496704,1.39777249780371,4.04434726393021,3.66000482254901,7.16229807043327,3.12883776346098,5.11430914660661,3.94797284663164,3.40706652442291,2.64782346010822,1.99051152976149,0.505445516867349,1.05220927943237,3.513251959993,4.59804208866946,3.78130472591233,2.10986744970001,3.33378845841506,2.94661556655154,3.46696380870997,0.517406741478031,4.095791865724,3.21480336285293,4.22282697993477,3.5071317188412,3.33656699070717,1.74126083261083,1.23469281844766,4.17971960318836,0,1.80143534980301,1.98914449576915,2.69263504296152,2.11073453982987,2.70093092191522,2.60419209143731,1.77087808572663,1.3884040159864,2.09280550275367,1.60964040839772,0.700592054203017,2.13927804887525,2.13417703302824,1.54030738137126,1.46199987425332,1.3173006917463,1.34206418760372,1.68231958851302,6.38008596751563,0.991256348951394,0.528901133327089,4.69234151177515,3.71578674976702,2.06187938115349,2.01683524623343,1.77902435075896,2.09248188723815,2.84717436926707,1.4822905925161,1.25667604400135,1.1937388322469,1.55971269695296,1.79763881730844,1.08069024937347,1.1948476395262,4.36236172192088,1.82797620175566,1.1270773567308,0.814605311381257,1.74557238450863,2.24434623649019,1.51767689098217,1.18088118383682,0.470996183524124,1.23397163921801,0.296452627087149,3.83743743147016,4.71741588271687,3.14806957338795,3.65148218499305,1.92941727801933,2.5462585178142,0.863088412352432,1.94562272130042,0.274561413188081,1.43768206527355,0.744281895337007,0.936113019343682,0.252578877947112,0.717589654087649,0.964887042726734,1.47802552133284,3.41084541186873,1.95557971730431,2.37643120085263,1.87752198630802,1.84256883185997,2.61848004974615,2.34160377429359,1.7339865851681,2.21464689648775,2.71073106717728,1.3109065177259,1.89953480052485,0.578596234326046,4.52373851817817,0,0.491764273019036,1.10374698521893,4.65596710964597,3.04750385139728,2.45902418065013,1.00988370881749,4.73262329124385,1.95219372148319,3.01592756825919,1.43381278771531,2.45078541490634,6.22768367735431,1.61924280669958,2.33804686329049,2.37172666767914,2.24924921495265,1.98716119291576,3.91744328067962,4.88660878060728,1.31976098378028,0,1.94224508923985,2.72091201268276,1.13163047853539,1.47650946440386,1.22974059177571,0.258428293168221,0.363533729477506,0.712994756769443,1.26414703174326,0,0,1.70219802876894,1.8006109403131,4.39819524861365,4.50107773566344,1.95074257006501,3.21063871683727,4.27827453565514,3.04464949114599,1.64270195644597,1.27099242518292,1.32317038832977,1.31909002353184,2.09903754704677,2.29189114726992,2.86493625607528,3.28281799490123,0.874442509889552,5.7481843623258,3.58828849675491,2.88941615148511,3.33350149265481,3.57900068308913,3.00727300986255,4.80434163733698,1.18984900995699,1.39951452323658,1.65839968565309,0,3.32152793260192,1.82987520414164,0.86404272657441,2.29997125615916,1.31017538247707,1.34864346384821,0.991841468704031,0.523511883968059,0.259229946583586,0.621339313086926,1.12738587736838,2.24274819065968,2.64733584731356,3.69457257853691,3.7456348808542,2.70329800785245,2.46450201156083,2.73429208172295,2.20204623293993,1.93267296660805,2.01621004380506,1.89606672376907,2.22997736819181,2.15693010046137,3.37794139742267,4.29664069601955,2.78153896693771,2.40390899039938,3.10148007066612,1.9183625490148,2.43861781295999,1.71404514732629,1.75424185331554,3.07877893249054,1.63627663054197,3.40095575422817,3.7737612073591,2.9605572681127,3.8613461763738,0.965947970160952,0.563047426353546,1.46521299413812,1.2862102744744,0,2.25900737046827,3.22227665555024,3.43737308063638,2.23409137046794,3.42541259885321,3.7769694869485,3.37511250115903,1.80128481289688,3.17199686288943,4.65984280576638,4.4628559461196,3.19219898720825,4.78054096111576,1.94485373654635,3.77303692730368,2.38996560985018,2.22246727801615,1.85431551515005,1.60459604795908,1.76888048234658,2.02783439912192,1.50901073108861,2.43467919421694,2.4969809437899,2.75690250986944,3.33405583898152,1.73826488917283,2.70072908649187,3.29668720642645,1.76638704161277,2.05721551431249,1.95223386775271,2.38436189947321,2.90692833264657,3.19971893412124,2.03075058940024,2.56099162021882,2.63069711437843,2.58027816307137,0.561142271657738,3.08451047122853,3.44765688314472,2.45538625901814,2.01417893541756,1.73615949883027,2.99772693525535,2.10538447600868,1.93383948643468,2.48674831689496,1.10295709559758,1.39120701372253
|short_description=p2@Rab35
}}
}}

Revision as of 16:56, 18 April 2012

Short description:p2@Rab35
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rab35_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000031492_5end
EntrezGene:Rab35
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rab35

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.44
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.05
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.67
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.05
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C310.52
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25.68
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.09
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.29
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.72
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.76
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.90
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.27
Mouse Schwann, donor1.CNhs12507.11728-123D94.54
Mouse Schwann, donor2.CNhs12573.11746-123F94.69
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.38
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C53.64
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I31.76
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A44.04
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F17.16
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C63.51
eyeball, embryo E14.CNhs10521.399-16E24.60
eyeball, embryo E15.CNhs10593.426-16C93.78
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C63.33
eyeball, neonate N01.CNhs11140.1532-43E72.95
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E24.22
forelimb, embryo E14.CNhs10577.413-26A83.51
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I64.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G11.54
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G16.38
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D82.06
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I94.36
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.24
kidney, neonate N10.CNhs11206.758-6D51.52
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F83.84
liver, embryo E13.CNhs10524.378-3H64.72
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D73.65
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G23.41
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A33.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.23
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H73.92
ovary, neonate N00.CNhs11217.1299-22I44.89
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C74.40
pituitary gland, embryo E14.CNhs11037.398-44A54.50
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H32.29
skin, neonate N06.CNhs11097.693-20I52.86
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C95.75
spleen, adult.CNhs10465.25-2G23.59
spleen, embryo E16.CNhs11035.461-43C12.89
spleen, embryo E18.CNhs11011.1271-21F23.33
spleen, neonate N10.CNhs11116.752-24D13.58
spleen, neonate N20.CNhs11112.824-19H13.01
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.32
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G53.69
testis, embryo E17.CNhs11029.486-18I53.75
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D92.20
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I22.16
thymus, embryo E16.CNhs11002.456-26C53.38
thymus, embryo E17.CNhs10581.478-18C14.30
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F82.40
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C41.92
thymus, neonate N07.CNhs11211.713-19D32.44
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G73.08
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.86
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I84.46
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H24.78
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.45
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:116081911..116081942,%2B&oldid=916904"