FFCP PHASE1:Mm9::chr4:132313022..132313067,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr4:132313022..132313067,- to FFCP PHASE1:Mm9::chr4:132313022..132313067,-: NSchange) |
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{{FFCP | {{FFCP | ||
|EntrezGene=100340 | |EntrezGene=100340 | ||
|HGNC= | |HGNC= | ||
|UniProt=P58242,Q3TLX9 | |UniProt=P58242,Q3TLX9 | ||
|association_with_transcript=18bp_to_NM_133888,uc008vbs.1_5end | |||
|description=CAGE_peak_1_at_Smpdl3b_5end | |||
|id=chr4:132313022..132313067,- | |||
|ontology_enrichment_disease= | |||
|phase1_expression=0.80074423552397,113.068032075153,106.924821256541,133.084252975005,151.771406173743,10.5763941304491,11.4470193891808,0.129123323441576,0.140788722151667,0,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0.202475267389826,0,0.315462165358238,0.411343300817216,0.84877930359606,3.48677489619386,0.496454756004426,0,16.1592347021341,19.9586074528438,74.6501553349526,35.3224836850441,45.2489588640367,37.2445902134493,61.999411920943,22.3947815761858,3.81018404075779,1.84519436275371,0,16.7533939455739,22.607911768755,18.1710727073509,0,0,0,0,0,0,4.28049181116963,3.34543873024398,2.20256102594018,0,9.59310688073965,10.7646229539891,7.77719596297134,3.77963338388479,7.18762821824858,0,0,0.336093799142464,0.771778308107841,0.573066879877513,0.515672092277442,0.404632921719196,1.05798195854407,0,2.71075625655306,1.77858959222228,12.1486461832989,13.8441290759376,19.1829631035447,6.89080254192331,5.37905627450176,1.55534418462716,0.540023753326763,0.841299845405528,1.71390590642282,1.76694832761291,0.122490799214954,0.575072826109418,0,1.10115880999389,0.255374676170375,0.46081959976873,0.131886287730194,0.365950574409639,0.52091337055676,1.3959149950069,1.12552522006336,1.68078072554491,0.589257170947335,0.854230084794618,0.186399445825301,0.227178579999552,0.226714680320357,0,0,2.719885334831,0,0,0.448026887097336,5.89866564553358,1.36344258062446,3.11743205523443,2.47337702157238,0.281686839553361,5.13305909657271,0,0,2.59789249213457,4.56047757855178,1.51657333504435,12.7885945285347,0.517875767294343,1.33597925158342,2.25530924795977,0.913396434936424,0.691846491768175,1.05505848386836,1.52865319276416,6.78599593180248,0.988779870937496,2.60278842455841,0,4.36770494858005,3.3126227769059,3.87900202508178,1.86391761218122,0.292780797011547,0,54.1568957042214,0.239630249011841,0,1.27070227073065,0.599162557619291,2.28750301409313,0.251308704225729,0.869121600961382,1.27857728665165,0.41557608911912,1.46017136760982,2.44414473240759,5.84712761867437,26.2831668771022,6.52369753248069,1.17108398666433,0.459804208866946,0.360124259610698,0.30140963567143,0.748401490664606,1.2811372028485,1.59292931751539,4.39795730256327,3.44908788692548,2.26927296201383,2.28736461413134,3.06874025398605,3.05851974148158,5.57203466435466,2.88094990971121,10.1507476077432,0,1.02939162845886,1.70498099637356,4.97101854085205,3.28336483973535,4.68161359798639,2.13070262026689,1.77087808572663,2.46827380619805,1.39520366850245,1.87791380979733,1.05088808130453,2.13927804887525,1.64167464079095,0.648550476366846,0.292399974850665,2.85415149878366,0.805238512562231,0.210289948564127,0.411618449517138,234.266917135513,53.4190144660359,1.70630600428187,2.32236671860439,3.09281907173024,2.62188582010345,1.11189021922435,2.47293313946327,27.9972146311262,1.97638745668813,3.51869292320377,2.78539060857611,1.75467678407208,24.268124033664,20.9653908378453,32.0617449939531,4.1726938209678,3.54170389090159,5.63538678365402,3.05476991767971,5.04276466635827,3.85747009396752,0.885311519739602,0.295220295959204,0.31399745568275,1.1105744752962,0.296452627087149,0.333690211432188,0.786235980452812,0.674586337154561,0.202860121388503,1.20588579876208,0.763877555344259,0.575392274901621,0,0.549122826376163,0,1.11642284300551,0,0.252578877947112,0.538192240565737,0.482443521363367,2.40179147216586,3.60033682363921,3.25929952884052,4.58311731593008,3.52035372432753,2.34508760418542,2.38043640886014,0.585400943573396,1.89162172927429,2.21464689648775,0.797273843287435,1.3109065177259,1.20879487306127,2.16973587872267,7.53956419696361,34.2660580805787,9.83528546038072,15.1765210467603,0.963303539926752,0.586058432961016,0,1.26235463602186,2.83957397474631,2.34263246577983,1.29254038639679,1.91175038362042,0.668396022247182,1.13230612315533,1.21443210502468,2.33804686329049,2.76701444562566,0.321321316421807,23.7039942297809,7.47875535402472,6.35259141478947,7.09371528781903,0,4.37005145078967,4.83717691143602,5.09233715340925,4.72483028609236,0.614870295887855,1.55056975900933,1.09060118843252,1.06949213515416,1.8962205476149,1.05418608574999,0,0.340439605753788,0.540183282093931,0.905510786479282,1.71469628025274,0.709360934569094,1.96205699362278,0.987294123612726,0.913394847343798,6.8054795338476,6.99045833850607,0.661585194164886,11.8718102117866,2.26050197374268,6.63442174209714,11.8178620563105,17.2347944732314,10.7847909553045,0.927126510052548,0.341741761595705,1.857481811669,0.555583582109135,0.376736914009382,0.136694227721025,0.228778173206523,0,0.139951452323658,0,7.63736494412091,3.16335993581135,2.64315307264903,3.99619761040665,1.88179466413022,4.58561383866973,3.50647300600534,3.30613822901344,3.40282724579238,2.59229946583586,15.5334828271731,2.25477175473676,7.47582730219894,10.4238848987971,16.3338998209,20.665571756437,20.7816034353657,15.3737982625938,14.1922779479906,13.0025587087881,3.8653459332161,3.16833006883652,0,1.01362607645082,1.02710957164827,0.25984164595559,0.895133478337407,0.198681354781265,0.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|phase1_expression=0.80074423552397,113.068032075153,106.924821256541,133.084252975005,151.771406173743,10.5763941304491,11.4470193891808,0.129123323441576,0.140788722151667,0,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0.202475267389826,0,0.315462165358238,0.411343300817216,0.84877930359606,3.48677489619386,0.496454756004426,0,16.1592347021341,19.9586074528438,74.6501553349526,35.3224836850441,45.2489588640367,37.2445902134493,61.999411920943,22.3947815761858,3.81018404075779,1.84519436275371,0,16.7533939455739,22.607911768755,18.1710727073509,0,0,0,0,0,0,4.28049181116963,3.34543873024398,2.20256102594018,0,9.59310688073965,10.7646229539891,7.77719596297134,3.77963338388479,7.18762821824858,0,0,0.336093799142464,0.771778308107841,0.573066879877513,0.515672092277442,0.404632921719196,1.05798195854407,0,2.71075625655306,1.77858959222228,12.1486461832989,13.8441290759376,19.1829631035447,6.89080254192331,5.37905627450176,1.55534418462716,0.540023753326763,0.841299845405528,1.71390590642282,1.76694832761291,0.122490799214954,0.575072826109418,0,1.10115880999389,0.255374676170375,0.46081959976873,0.131886287730194,0.365950574409639,0.52091337055676,1.3959149950069,1.12552522006336,1.68078072554491,0.589257170947335,0.854230084794618,0.186399445825301,0.227178579999552,0.226714680320357,0,0,2.719885334831,0,0,0.448026887097336,5.89866564553358,1.36344258062446,3.11743205523443,2.47337702157238,0.281686839553361,5.13305909657271,0,0,2.59789249213457,4.56047757855178,1.51657333504435,12.7885945285347,0.517875767294343,1.33597925158342,2.25530924795977,0.913396434936424,0.691846491768175,1.05505848386836,1.52865319276416,6.78599593180248,0.988779870937496,2.60278842455841,0,4.36770494858005,3.3126227769059,3.87900202508178,1.86391761218122,0.292780797011547,0,54.1568957042214,0.239630249011841,0,1.27070227073065,0.599162557619291,2.28750301409313,0.251308704225729,0.869121600961382,1.27857728665165,0.41557608911912,1.46017136760982,2.44414473240759,5.84712761867437,26.2831668771022,6.52369753248069,1.17108398666433,0.459804208866946,0.360124259610698,0.30140963567143,0.748401490664606,1.2811372028485,1.59292931751539,4.39795730256327,3.44908788692548,2.26927296201383,2.28736461413134,3.06874025398605,3.05851974148158,5.57203466435466,2.88094990971121,10.1507476077432,0,1.02939162845886,1.70498099637356,4.97101854085205,3.28336483973535,4.68161359798639,2.13070262026689,1.77087808572663,2.46827380619805,1.39520366850245,1.87791380979733,1.05088808130453,2.13927804887525,1.64167464079095,0.648550476366846,0.292399974850665,2.85415149878366,0.805238512562231,0.210289948564127,0.411618449517138,234.266917135513,53.4190144660359,1.70630600428187,2.32236671860439,3.09281907173024,2.62188582010345,1.11189021922435,2.47293313946327,27.9972146311262,1.97638745668813,3.51869292320377,2.78539060857611,1.75467678407208,24.268124033664,20.9653908378453,32.0617449939531,4.1726938209678,3.54170389090159,5.63538678365402,3.05476991767971,5.04276466635827,3.85747009396752,0.885311519739602,0.295220295959204,0.31399745568275,1.1105744752962,0.296452627087149,0.333690211432188,0.786235980452812,0.674586337154561,0.202860121388503,1.20588579876208,0.763877555344259,0.575392274901621,0,0.549122826376163,0,1.11642284300551,0,0.252578877947112,0.538192240565737,0.482443521363367,2.40179147216586,3.60033682363921,3.25929952884052,4.58311731593008,3.52035372432753,2.34508760418542,2.38043640886014,0.585400943573396,1.89162172927429,2.21464689648775,0.797273843287435,1.3109065177259,1.20879487306127,2.16973587872267,7.53956419696361,34.2660580805787,9.83528546038072,15.1765210467603,0.963303539926752,0.586058432961016,0,1.26235463602186,2.83957397474631,2.34263246577983,1.29254038639679,1.91175038362042,0.668396022247182,1.13230612315533,1.21443210502468,2.33804686329049,2.76701444562566,0.321321316421807,23.7039942297809,7.47875535402472,6.35259141478947,7.09371528781903,0,4.37005145078967,4.83717691143602,5.09233715340925,4.72483028609236,0.614870295887855,1.55056975900933,1.09060118843252,1.06949213515416,1.8962205476149,1.05418608574999,0,0.340439605753788,0.540183282093931,0.905510786479282,1.71469628025274,0.709360934569094,1.96205699362278,0.987294123612726,0.913394847343798,6.8054795338476,6.99045833850607,0.661585194164886,11.8718102117866,2.26050197374268,6.63442174209714,11.8178620563105,17.2347944732314,10.7847909553045,0.927126510052548,0.341741761595705,1.857481811669,0.555583582109135,0.376736914009382,0.136694227721025,0.228778173206523,0,0.139951452323658,0,7.63736494412091,3.16335993581135,2.64315307264903,3.99619761040665,1.88179466413022,4.58561383866973,3.50647300600534,3.30613822901344,3.40282724579238,2.59229946583586,15.5334828271731,2.25477175473676,7.47582730219894,10.4238848987971,16.3338998209,20.665571756437,20.7816034353657,15.3737982625938,14.1922779479906,13.0025587087881,3.8653459332161,3.16833006883652,0,1.01362607645082,1.02710957164827,0.25984164595559,0.895133478337407,0.198681354781265,0.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| ||
|short_description=p1@Smpdl3b | |||
}} | }} | ||
Revision as of 15:08, 18 April 2012
| Short description: | p1@Smpdl3b |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Smpdl3b_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 18bp_to_NM_133888, uc008vbs.1_5end |
| EntrezGene: | Smpdl3b |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
