Personal tools

FFCP PHASE1:Mm9::chr10:86241820..86241840,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=CL:0000117!3.06e-07!23;CL:0000337!3.06e-07!23
|ontology_enrichment_celltype=CL:0000117!3.06e-07!23;CL:0000337!3.06e-07!23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0001049!1.64e-12!52;UBERON:0005068!1.64e-12!52;UBERON:0006241!1.64e-12!52;UBERON:0007135!1.64e-12!52;UBERON:0002020!2.17e-12!34;UBERON:0000955!6.63e-12!50;UBERON:0006238!6.63e-12!50;UBERON:0002616!1.52e-11!49;UBERON:0000073!2.98e-11!75;UBERON:0001016!2.98e-11!75;UBERON:0001017!5.11e-11!73;UBERON:0005743!5.11e-11!73;UBERON:0002791!4.50e-10!29;UBERON:0003528!4.50e-10!29;UBERON:0001893!4.50e-10!29;UBERON:0004121!2.81e-09!102;UBERON:0000924!2.81e-09!102;UBERON:0006601!2.81e-09!102;UBERON:0000033!3.53e-09!63;UBERON:0003080!9.14e-09!40;UBERON:0002346!1.92e-08!71;UBERON:0003075!1.92e-08!71;UBERON:0007284!1.92e-08!71;UBERON:0002780!2.75e-08!39;UBERON:0001890!2.75e-08!39;UBERON:0006240!2.75e-08!39;UBERON:0004111!4.62e-08!122;UBERON:0002021!8.22e-08!10;UBERON:0000411!8.22e-08!10;UBERON:0001950!8.22e-08!10;UBERON:0000025!1.01e-07!114;UBERON:0002619!2.13e-07!17;UBERON:0000956!9.58e-07!21;UBERON:0001869!9.58e-07!21;UBERON:0000203!9.58e-07!21
|phase1_expression=1.92178616525753,0.348975407639361,0,0,0,2.51818907867835,0.700837921786577,3.87369970324729,13.938083493015,13.8098070529976,7.36237263369671,7.81767158154297,1.88320802924326,2.44777126773193,2.33176833270964,3.23960427823721,0.699561878128147,4.88966356305268,5.07323404341233,3.81950686618227,4.76242424845991,1.58865521921416,1.82839852397255,0.639969691173627,0.91763712426868,2.29692785646008,0.430761996159075,0.430942465371778,0.190023419456374,0.756090389279792,0.886922042621219,11.4305521222734,7.99584223859941,0,0.866554859253824,0.664938581433969,0.612508068787107,0.418531630736908,2.3440060335714,1.57057123192139,0,2.04913645487534,0.971020706062307,4.65818226509636,3.4468156614635,2.75320128242522,3.12956537739216,0.218025156380447,2.85592037554813,5.05517737593137,0.839918529752175,5.75010257459886,7.04686945442493,3.62681071005672,7.73015738027667,1.28629718017973,0.85960031981627,1.54701627683233,7.08107613008592,14.2827564403449,15.2119536841483,1.0165335962074,2.66788438833342,4.49949858640699,1.97773272513395,0.7104801149461,2.09720077362883,1.15265491596466,2.38486108309499,1.21505344498522,2.10324961351382,8.2838785477103,11.0434270475807,2.20483438586917,1.62937300731002,2.75765635983006,24.2254938198655,36.3908913542785,31.9501589172986,8.96826756565318,11.0700048758916,7.29278718779464,5.58365998002762,14.069065250792,18.7941844765476,12.0797720044204,10.9626194215309,8.01517617048792,4.16494063332512,3.02286240427142,4.63783181922684,0.860423876981386,5.439770669662,2.15881276655127,5.19821133958135,9.85659151614138,3.65155492342555,3.57903677413921,3.11743205523443,3.18005617059306,4.08445917352373,11.5493829672886,7.64415719119937,49.7746692207332,1.94841936910093,4.30711771307668,3.53867111510348,2.05530983494308,4.40194402200192,10.0940654564081,1.04091196059682,2.43572382649713,2.30615497256059,3.3158980921577,7.17291113527799,3.51866455723091,0.988779870937496,1.59059292611903,1.76922110389975,3.88240439873782,3.3126227769059,5.81850303762267,1.86391761218122,18.1524094147159,13.823482649688,0,4.07371423320129,2.99951365496704,3.55796635804581,14.9790639404823,14.640019290196,4.52355667606312,23.4662832259573,23.0143911597297,22.4411088124325,19.7934340942664,1.73126918545538,2.73695335342205,4.80173241023982,4.20883711772948,0.520481771850815,0,0.720248519221397,1.05493372485001,1.63287597963187,1.40925092313335,0.937017245597288,4.9153640440413,0,0.567318240503458,0.703804496655795,0.43839146485515,0.556094498451196,1.74126083261083,1.64625709126355,0.796137067273973,6.31991868581911,2.57347907114715,2.27330799516474,1.65700618028402,0.703578179943289,2.16074473753218,2.13070262026689,2.75469924446365,4.16521204795921,5.11574678450897,6.43856163359086,11.3262382096154,4.93679549740441,5.25335885053105,6.97191762094359,7.60239934611728,7.90380415047782,6.97873377553933,38.6933505357994,8.64398743985989,0.330418782983798,0.793351699990633,0.426576501070468,0,0.77320476793256,0.80673409849337,1.11189021922435,0.760902504450237,1.42358718463353,1.31759163779209,0.502670417600539,1.1937388322469,0.38992817423824,0.898819408654221,1.08069024937347,0.597423819763102,0.948339504765408,0.799739588268102,3.38123207019241,1.22190796707189,0.387904974335251,1.75339549725796,1.26473074248515,1.03327103585722,0.941992367048249,1.72756029490521,4.15033677922008,0.500535317148282,0.393117990226406,0,1.01430060694251,0.72353147925725,0.763877555344259,0.575392274901621,3.89124544260085,1.92192989231657,0,1.48856379067401,2.49630138491648,3.28352541331245,2.69096120282868,4.3419916922703,2.21703828199926,0.189491411770485,1.79261474086228,1.35796068620151,0.938760993154008,1.50755631697634,1.6663054862021,2.53673742215138,2.67979744980525,3.10050565508285,2.55127629851979,2.45794972073607,1.72684981865896,1.88043776155965,3.01582567878545,1.63171705145613,4.91764273019036,6.34654516500885,13.3256989689867,13.1277088983268,0.327869890753351,15.6531974866711,1.89304931649754,0.390438744296638,1.29254038639679,0.477937595905104,1.33679204449436,1.69845918473299,2.02405350837447,1.16902343164525,1.58115111178609,6.74774764485795,2.41298144854057,0.890328018336276,1.14020871547503,2.3095817216155,3.98235415019888,0.485561272309963,1.51161778482376,2.82907619633847,3.2483208216885,2.15204603560749,4.65170927702798,2.54473610634254,2.49548164869305,5.37262488490887,6.32511651449993,10.3135543248187,6.46835250932197,0.36012218806262,1.16422815404479,0.643011105094777,1.41872186913819,1.07021290561242,2.30368628842969,5.48036908406279,1.87737366450968,2.33015277950202,3.52845436887939,2.96795255294664,2.26050197374268,1.32688434841943,0.596861720015682,1.64140899745061,0.291480836629851,13.5360470467672,2.73393409276564,1.03193433981611,1.29636169158798,0.565105371014073,1.91371918809435,1.14389086603261,5.09935289981566,5.59805809294632,4.97519905695926,4.77335309007557,0.632671987162271,0,0.86404272657441,0.836353184057875,0.655087691238533,1.21377911746339,2.47960367176008,3.14107130380836,1.03691978633434,6.83473244395618,3.38215763210514,1.19613236835183,0.992750942742586,2.13896307178452,1.03327858782185,1.01373675294467,1.17357238645754,2.47388331203505,3.35549902162275,5.07326653734613,6.91272015018877,2.21207784439725,1.21635129174099,0.513554785824136,0.77952493786677,1.07416017400489,0.596044064343795,0.480781798079875,0.443068581523732,1.00966449948148,1.06689529317,0.705783295957884,1.07203668813728,0.481059208201647,0.701261413089414,5.44152920676507,1.55390167361845,0.897138566094757,1.00730769818447,2.12508553435409,3.19060208267009,3.6630324853453,1.07184189539533,2.00628841614145,19.2015626489803,25.7782132444019,23.4887160510153,26.6372432632716,33.5690434687615,30.215755895588,26.3258775090404,18.9134905354173,26.7354021300681,17.0860902878101,0.207574695168353,0.798049746802062,1.02440163452481,1.21553358534147,2.09613162627982,3.30918315210025,3.11145418922261,3.29656091582231,1.92551525755089,2.02157769411038,3.04175159868288,3.9611531691076,2.52832070168682,2.36893063898016,1.78049953762401,2.85776214769844,2.20180219295225,3.27945674788299,3.29668720642645,3.38557516309114,3.42869252385415,2.30718548007139,4.05341522910446,2.61623549938191,3.01150017329058,2.36920902096694,2.92684756596436,2.63069711437843,3.80251518768413,2.80571135828869,3.44041552560105,3.34915240076916,5.32000356120596,4.18329471202108,1.73615949883027,3.99696924700713,3.04111090979031,4.08255002691767,4.97349663378993,3.30887128679273,4.63735671240843
|phase1_expression=1.92178616525753,0.348975407639361,0,0,0,2.51818907867835,0.700837921786577,3.87369970324729,13.938083493015,13.8098070529976,7.36237263369671,7.81767158154297,1.88320802924326,2.44777126773193,2.33176833270964,3.23960427823721,0.699561878128147,4.88966356305268,5.07323404341233,3.81950686618227,4.76242424845991,1.58865521921416,1.82839852397255,0.639969691173627,0.91763712426868,2.29692785646008,0.430761996159075,0.430942465371778,0.190023419456374,0.756090389279792,0.886922042621219,11.4305521222734,7.99584223859941,0,0.866554859253824,0.664938581433969,0.612508068787107,0.418531630736908,2.3440060335714,1.57057123192139,0,2.04913645487534,0.971020706062307,4.65818226509636,3.4468156614635,2.75320128242522,3.12956537739216,0.218025156380447,2.85592037554813,5.05517737593137,0.839918529752175,5.75010257459886,7.04686945442493,3.62681071005672,7.73015738027667,1.28629718017973,0.85960031981627,1.54701627683233,7.08107613008592,14.2827564403449,15.2119536841483,1.0165335962074,2.66788438833342,4.49949858640699,1.97773272513395,0.7104801149461,2.09720077362883,1.15265491596466,2.38486108309499,1.21505344498522,2.10324961351382,8.2838785477103,11.0434270475807,2.20483438586917,1.62937300731002,2.75765635983006,24.2254938198655,36.3908913542785,31.9501589172986,8.96826756565318,11.0700048758916,7.29278718779464,5.58365998002762,14.069065250792,18.7941844765476,12.0797720044204,10.9626194215309,8.01517617048792,4.16494063332512,3.02286240427142,4.63783181922684,0.860423876981386,5.439770669662,2.15881276655127,5.19821133958135,9.85659151614138,3.65155492342555,3.57903677413921,3.11743205523443,3.18005617059306,4.08445917352373,11.5493829672886,7.64415719119937,49.7746692207332,1.94841936910093,4.30711771307668,3.53867111510348,2.05530983494308,4.40194402200192,10.0940654564081,1.04091196059682,2.43572382649713,2.30615497256059,3.3158980921577,7.17291113527799,3.51866455723091,0.988779870937496,1.59059292611903,1.76922110389975,3.88240439873782,3.3126227769059,5.81850303762267,1.86391761218122,18.1524094147159,13.823482649688,0,4.07371423320129,2.99951365496704,3.55796635804581,14.9790639404823,14.640019290196,4.52355667606312,23.4662832259573,23.0143911597297,22.4411088124325,19.7934340942664,1.73126918545538,2.73695335342205,4.80173241023982,4.20883711772948,0.520481771850815,0,0.720248519221397,1.05493372485001,1.63287597963187,1.40925092313335,0.937017245597288,4.9153640440413,0,0.567318240503458,0.703804496655795,0.43839146485515,0.556094498451196,1.74126083261083,1.64625709126355,0.796137067273973,6.31991868581911,2.57347907114715,2.27330799516474,1.65700618028402,0.703578179943289,2.16074473753218,2.13070262026689,2.75469924446365,4.16521204795921,5.11574678450897,6.43856163359086,11.3262382096154,4.93679549740441,5.25335885053105,6.97191762094359,7.60239934611728,7.90380415047782,6.97873377553933,38.6933505357994,8.64398743985989,0.330418782983798,0.793351699990633,0.426576501070468,0,0.77320476793256,0.80673409849337,1.11189021922435,0.760902504450237,1.42358718463353,1.31759163779209,0.502670417600539,1.1937388322469,0.38992817423824,0.898819408654221,1.08069024937347,0.597423819763102,0.948339504765408,0.799739588268102,3.38123207019241,1.22190796707189,0.387904974335251,1.75339549725796,1.26473074248515,1.03327103585722,0.941992367048249,1.72756029490521,4.15033677922008,0.500535317148282,0.393117990226406,0,1.01430060694251,0.72353147925725,0.763877555344259,0.575392274901621,3.89124544260085,1.92192989231657,0,1.48856379067401,2.49630138491648,3.28352541331245,2.69096120282868,4.3419916922703,2.21703828199926,0.189491411770485,1.79261474086228,1.35796068620151,0.938760993154008,1.50755631697634,1.6663054862021,2.53673742215138,2.67979744980525,3.10050565508285,2.55127629851979,2.45794972073607,1.72684981865896,1.88043776155965,3.01582567878545,1.63171705145613,4.91764273019036,6.34654516500885,13.3256989689867,13.1277088983268,0.327869890753351,15.6531974866711,1.89304931649754,0.390438744296638,1.29254038639679,0.477937595905104,1.33679204449436,1.69845918473299,2.02405350837447,1.16902343164525,1.58115111178609,6.74774764485795,2.41298144854057,0.890328018336276,1.14020871547503,2.3095817216155,3.98235415019888,0.485561272309963,1.51161778482376,2.82907619633847,3.2483208216885,2.15204603560749,4.65170927702798,2.54473610634254,2.49548164869305,5.37262488490887,6.32511651449993,10.3135543248187,6.46835250932197,0.36012218806262,1.16422815404479,0.643011105094777,1.41872186913819,1.07021290561242,2.30368628842969,5.48036908406279,1.87737366450968,2.33015277950202,3.52845436887939,2.96795255294664,2.26050197374268,1.32688434841943,0.596861720015682,1.64140899745061,0.291480836629851,13.5360470467672,2.73393409276564,1.03193433981611,1.29636169158798,0.565105371014073,1.91371918809435,1.14389086603261,5.09935289981566,5.59805809294632,4.97519905695926,4.77335309007557,0.632671987162271,0,0.86404272657441,0.836353184057875,0.655087691238533,1.21377911746339,2.47960367176008,3.14107130380836,1.03691978633434,6.83473244395618,3.38215763210514,1.19613236835183,0.992750942742586,2.13896307178452,1.03327858782185,1.01373675294467,1.17357238645754,2.47388331203505,3.35549902162275,5.07326653734613,6.91272015018877,2.21207784439725,1.21635129174099,0.513554785824136,0.77952493786677,1.07416017400489,0.596044064343795,0.480781798079875,0.443068581523732,1.00966449948148,1.06689529317,0.705783295957884,1.07203668813728,0.481059208201647,0.701261413089414,5.44152920676507,1.55390167361845,0.897138566094757,1.00730769818447,2.12508553435409,3.19060208267009,3.6630324853453,1.07184189539533,2.00628841614145,19.2015626489803,25.7782132444019,23.4887160510153,26.6372432632716,33.5690434687615,30.215755895588,26.3258775090404,18.9134905354173,26.7354021300681,17.0860902878101,0.207574695168353,0.798049746802062,1.02440163452481,1.21553358534147,2.09613162627982,3.30918315210025,3.11145418922261,3.29656091582231,1.92551525755089,2.02157769411038,3.04175159868288,3.9611531691076,2.52832070168682,2.36893063898016,1.78049953762401,2.85776214769844,2.20180219295225,3.27945674788299,3.29668720642645,3.38557516309114,3.42869252385415,2.30718548007139,4.05341522910446,2.61623549938191,3.01150017329058,2.36920902096694,2.92684756596436,2.63069711437843,3.80251518768413,2.80571135828869,3.44041552560105,3.34915240076916,5.32000356120596,4.18329471202108,1.73615949883027,3.99696924700713,3.04111090979031,4.08255002691767,4.97349663378993,3.30887128679273,4.63735671240843
|short_description=p2@Nt5dc3
|short_description=p2@Nt5dc3
}}
}}

Revision as of 12:29, 18 April 2012

Short description:p2@Nt5dc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nt5dc3_5end
Coexpression cluster:NA
Association with transcript: 70bp_to_ENSMUST00000099396, NM_175331, uc007gqn.1_5end
EntrezGene:Nt5dc3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Nt5dc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.87
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E713.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F213.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.82
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.45
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.07
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I311.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.66
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.45
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.06
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.05
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.73
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C37.08
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.04
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D324.23
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F336.39
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D731.95
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.97
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.07
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.79
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.02
Mouse Schwann, donor1.CNhs12507.11728-123D94.16
Mouse Schwann, donor2.CNhs12573.11746-123F93.02
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.86
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.08
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B649.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D710.09
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F53.32
adrenal gland, neonate N00.CNhs11191.1311-23C17.17
adrenal gland, neonate N25.CNhs11223.1377-27I33.52
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F53.88
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B218.15
cerebellum, neonate N30.CNhs11135.1395-42I213.82
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.07
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.56
corpora quadrigemina, adult.CNhs10501.16-22A414.98
corpus striatum, adult.CNhs10487.19-21D814.64
corpus striatum, neonate N00.CNhs11226.630-43F14.52
cortex, adult.CNhs10473.12-14D523.47
cortex, neonate N30.CNhs11107.1392-42F223.01
diencephalon, adult.CNhs10482.20-12F222.44
diencephalon, neonate N30.CNhs11201.1388-42B219.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.74
epididymis, adult.CNhs10490.58-23B24.80
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.63
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C64.17
heart, embryo E17.CNhs11025.479-18E55.12
heart, embryo E18.CNhs11030.1283-20G36.44
heart, neonate N00.CNhs11213.639-21E311.33
heart, neonate N03.CNhs11221.1349-25I24.94
heart, neonate N10.CNhs11118.749-24G15.25
heart, neonate N16.CNhs11209.782-15G16.97
heart, neonate N20.CNhs11127.821-26I67.60
heart, neonate N25.CNhs11196.1351-25D37.90
heart, neonate N30.CNhs11202.1390-42D26.98
hippocampus, adult.CNhs10478.13-16E838.69
hippocampus, neonate N00.CNhs11228.627-43G18.64
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G71.75
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F43.89
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A33.28
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E52.68
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C213.33
medulla oblongata, neonate N30.CNhs11200.1396-42A313.13
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C215.65
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E52.83
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C32.97
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H31.33
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C913.54
spleen, adult.CNhs10465.25-2G22.73
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.98
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A92.48
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D93.36
testis, neonate N20.CNhs11110.839-18H35.07
testis, neonate N30.CNhs11130.1391-42E26.91
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B45.44
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E53.66
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.20
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A225.78
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A323.49
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A433.57
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A530.22
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A626.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A826.74
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.09
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.18
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C24.08
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B44.64





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:86241820..86241840,%2B&oldid=885054"